Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CLIC4Q9Y696 ZNF702P-202ENST00000434269 1966 ntBASIC1.91□□□□□ -2.1
CLIC4Q9Y696 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.91□□□□□ -2.1
CLIC4Q9Y696 RNA5SP363-201ENST00000365072 115 ntBASIC1.91□□□□□ -2.1
CLIC4Q9Y696 SNORD14.1-201ENST00000365609 90 ntBASIC1.91□□□□□ -2.1
CLIC4Q9Y696 SNORA22B-201ENST00000383876 138 ntBASIC1.91□□□□□ -2.1
CLIC4Q9Y696 Y_RNA.424-201ENST00000384063 103 ntBASIC1.91□□□□□ -2.1
CLIC4Q9Y696 Y_RNA.485-201ENST00000384395 102 ntBASIC1.91□□□□□ -2.1
CLIC4Q9Y696 AL158823.1-201ENST00000418441 478 ntBASIC1.91□□□□□ -2.1
CLIC4Q9Y696 AC005534.2-201ENST00000431047 433 ntBASIC1.91□□□□□ -2.1
CLIC4Q9Y696 YWHAEP4-201ENST00000505390 198 ntBASIC1.91□□□□□ -2.1
CLIC4Q9Y696 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.91□□□□□ -2.1
CLIC4Q9Y696 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.91□□□□□ -2.1
CLIC4Q9Y696 AC040926.1-201ENST00000530195 238 ntBASIC1.91□□□□□ -2.1
CLIC4Q9Y696 AC022432.1-201ENST00000595739 310 ntBASIC1.91□□□□□ -2.1
CLIC4Q9Y696 AL356055.1-201ENST00000602528 446 ntBASIC1.91□□□□□ -2.1
CLIC4Q9Y696 AC012493.3-201ENST00000604494 112 ntBASIC1.91□□□□□ -2.1
CLIC4Q9Y696 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.91□□□□□ -2.1
CLIC4Q9Y696 AC240442.1-201ENST00000616055 283 ntBASIC1.91□□□□□ -2.1
CLIC4Q9Y696 AL162373.1-201ENST00000620433 407 ntBASIC1.91□□□□□ -2.1
CLIC4Q9Y696 MIR338-201ENST00000636369 67 ntBASIC1.91□□□□□ -2.1
CLIC4Q9Y696 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
CLIC4Q9Y696 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
CLIC4Q9Y696 AC091812.1-201ENST00000432235 1948 ntBASIC1.91□□□□□ -2.1
CLIC4Q9Y696 CENPCP1-201ENST00000533085 2578 ntBASIC1.91□□□□□ -2.1
CLIC4Q9Y696 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
CLIC4Q9Y696 AL356292.1-201ENST00000283110 373 ntBASIC1.9□□□□□ -2.11
CLIC4Q9Y696 MIR515-2-201ENST00000384883 83 ntBASIC1.9□□□□□ -2.11
CLIC4Q9Y696 MIR515-1-201ENST00000384884 83 ntBASIC1.9□□□□□ -2.11
CLIC4Q9Y696 MIR17-201ENST00000385012 84 ntBASIC1.9□□□□□ -2.11
CLIC4Q9Y696 MRPL42P3-201ENST00000401492 326 ntBASIC1.9□□□□□ -2.11
CLIC4Q9Y696 AL117342.1-201ENST00000404861 406 ntBASIC1.9□□□□□ -2.11
CLIC4Q9Y696 CST2P1-201ENST00000425770 87 ntBASIC1.9□□□□□ -2.11
CLIC4Q9Y696 HMGN2P34-201ENST00000437647 269 ntBASIC1.9□□□□□ -2.11
CLIC4Q9Y696 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.9□□□□□ -2.11
CLIC4Q9Y696 RNU6-250P-201ENST00000516958 103 ntBASIC1.9□□□□□ -2.11
CLIC4Q9Y696 Y_RNA.713-201ENST00000517013 96 ntBASIC1.9□□□□□ -2.11
CLIC4Q9Y696 Y_RNA.721-201ENST00000517207 102 ntBASIC1.9□□□□□ -2.11
CLIC4Q9Y696 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.9□□□□□ -2.11
CLIC4Q9Y696 MIR4287-201ENST00000579398 78 ntBASIC1.9□□□□□ -2.11
CLIC4Q9Y696 AC008749.1-201ENST00000597650 306 ntBASIC1.9□□□□□ -2.11
CLIC4Q9Y696 AC069114.2-201ENST00000604699 304 ntBASIC1.9□□□□□ -2.11
CLIC4Q9Y696 Y_RNA.772-201ENST00000606692 102 ntBASIC1.9□□□□□ -2.11
CLIC4Q9Y696 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
CLIC4Q9Y696 RNA5SP276-201ENST00000362580 94 ntBASIC1.89□□□□□ -2.11
CLIC4Q9Y696 RNU6-862P-201ENST00000362804 105 ntBASIC1.89□□□□□ -2.11
CLIC4Q9Y696 RNU6-961P-201ENST00000363893 105 ntBASIC1.89□□□□□ -2.11
CLIC4Q9Y696 Y_RNA.202-201ENST00000364083 110 ntBASIC1.89□□□□□ -2.11
CLIC4Q9Y696 Y_RNA.230-201ENST00000364348 109 ntBASIC1.89□□□□□ -2.11
CLIC4Q9Y696 SNORA63.7-201ENST00000365579 123 ntBASIC1.89□□□□□ -2.11
CLIC4Q9Y696 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.89□□□□□ -2.11
CLIC4Q9Y696 AC099677.2-201ENST00000436385 175 ntBASIC1.89□□□□□ -2.11
CLIC4Q9Y696 SUMO1P2-201ENST00000452524 304 ntBASIC1.89□□□□□ -2.11
CLIC4Q9Y696 RNVU1-2-201ENST00000516326 135 ntBASIC1.89□□□□□ -2.11
CLIC4Q9Y696 AC022616.4-201ENST00000522985 181 ntBASIC1.89□□□□□ -2.11
CLIC4Q9Y696 AP002001.1-203ENST00000534002 267 ntBASIC1.89□□□□□ -2.11
CLIC4Q9Y696 AC006435.5-201ENST00000624486 112 ntBASIC1.89□□□□□ -2.11
CLIC4Q9Y696 RNU1-96P-201ENST00000364163 162 ntBASIC1.88□□□□□ -2.11
CLIC4Q9Y696 SNORA72.2-201ENST00000365028 127 ntBASIC1.88□□□□□ -2.11
CLIC4Q9Y696 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.88□□□□□ -2.11
CLIC4Q9Y696 Y_RNA.458-201ENST00000384240 102 ntBASIC1.88□□□□□ -2.11
CLIC4Q9Y696 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.88□□□□□ -2.11
CLIC4Q9Y696 RPL23AP3-201ENST00000453844 468 ntBASIC1.88□□□□□ -2.11
CLIC4Q9Y696 U8.20-201ENST00000459445 131 ntBASIC1.88□□□□□ -2.11
CLIC4Q9Y696 AC010598.1-201ENST00000510378 103 ntBASIC1.88□□□□□ -2.11
CLIC4Q9Y696 RNU6-1153P-201ENST00000516760 105 ntBASIC1.88□□□□□ -2.11
CLIC4Q9Y696 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CLIC4Q9Y696 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.88□□□□□ -2.11
CLIC4Q9Y696 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.88□□□□□ -2.11
CLIC4Q9Y696 MIR5094-201ENST00000578766 85 ntBASIC1.88□□□□□ -2.11
CLIC4Q9Y696 AC005176.2-201ENST00000596933 147 ntBASIC1.88□□□□□ -2.11
CLIC4Q9Y696 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.88□□□□□ -2.11
CLIC4Q9Y696 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.88□□□□□ -2.11
CLIC4Q9Y696 AC011476.5-201ENST00000615594 130 ntBASIC1.88□□□□□ -2.11
CLIC4Q9Y696 AC022140.2-201ENST00000623500 188 ntBASIC1.88□□□□□ -2.11
CLIC4Q9Y696 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CLIC4Q9Y696 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CLIC4Q9Y696 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CLIC4Q9Y696 Y_RNA.158-201ENST00000363651 101 ntBASIC1.87□□□□□ -2.11
CLIC4Q9Y696 Y_RNA.287-201ENST00000364853 94 ntBASIC1.87□□□□□ -2.11
CLIC4Q9Y696 Y_RNA.471-201ENST00000384312 102 ntBASIC1.87□□□□□ -2.11
CLIC4Q9Y696 SNORA8-201ENST00000384574 139 ntBASIC1.87□□□□□ -2.11
CLIC4Q9Y696 RNU6-417P-201ENST00000384712 107 ntBASIC1.87□□□□□ -2.11
CLIC4Q9Y696 Y_RNA.645-201ENST00000391229 102 ntBASIC1.87□□□□□ -2.11
CLIC4Q9Y696 RPEP5-201ENST00000441137 268 ntBASIC1.87□□□□□ -2.11
CLIC4Q9Y696 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.87□□□□□ -2.11
CLIC4Q9Y696 SNORD65B-201ENST00000459126 73 ntBASIC1.87□□□□□ -2.11
CLIC4Q9Y696 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CLIC4Q9Y696 CBX3P4-201ENST00000538909 354 ntBASIC1.87□□□□□ -2.11
CLIC4Q9Y696 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.87□□□□□ -2.11
CLIC4Q9Y696 AL137100.2-201ENST00000555786 315 ntBASIC1.87□□□□□ -2.11
CLIC4Q9Y696 SUB1P4-201ENST00000566062 339 ntBASIC1.87□□□□□ -2.11
CLIC4Q9Y696 AC124312.5-201ENST00000604451 268 ntBASIC1.87□□□□□ -2.11
CLIC4Q9Y696 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.87□□□□□ -2.11
CLIC4Q9Y696 SDR42E1P4-201ENST00000620894 481 ntBASIC1.87□□□□□ -2.11
CLIC4Q9Y696 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.87□□□□□ -2.11
CLIC4Q9Y696 RNU6-626P-201ENST00000363354 107 ntBASIC1.86□□□□□ -2.11
CLIC4Q9Y696 Y_RNA.216-201ENST00000364205 93 ntBASIC1.86□□□□□ -2.11
CLIC4Q9Y696 RNU6-454P-201ENST00000364292 107 ntBASIC1.86□□□□□ -2.11
CLIC4Q9Y696 RNU6-20P-201ENST00000384106 107 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 428.6 ms