Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 Y_RNA.441-201ENST00000384123 112 ntBASIC2.96□□□□□ -1.94
PPARGC1AQ9UBK2 SNORA20B-201ENST00000384220 132 ntBASIC2.96□□□□□ -1.94
PPARGC1AQ9UBK2 SNORA8.3-201ENST00000384679 139 ntBASIC2.96□□□□□ -1.94
PPARGC1AQ9UBK2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
PPARGC1AQ9UBK2 RNU6-57P-201ENST00000411348 103 ntBASIC2.96□□□□□ -1.94
PPARGC1AQ9UBK2 AL121890.1-201ENST00000435457 205 ntBASIC2.96□□□□□ -1.94
PPARGC1AQ9UBK2 AC090515.1-201ENST00000465295 476 ntBASIC2.96□□□□□ -1.94
PPARGC1AQ9UBK2 AC005840.1-201ENST00000498412 377 ntBASIC2.96□□□□□ -1.94
PPARGC1AQ9UBK2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.96□□□□□ -1.94
PPARGC1AQ9UBK2 RN7SKP164-201ENST00000516138 266 ntBASIC2.96□□□□□ -1.94
PPARGC1AQ9UBK2 RNU6-1219P-201ENST00000516143 112 ntBASIC2.96□□□□□ -1.94
PPARGC1AQ9UBK2 RNA5SP76-201ENST00000516277 87 ntBASIC2.96□□□□□ -1.94
PPARGC1AQ9UBK2 MIR6733-201ENST00000635723 61 ntBASIC2.96□□□□□ -1.94
PPARGC1AQ9UBK2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
PPARGC1AQ9UBK2 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
PPARGC1AQ9UBK2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.96□□□□□ -1.94
PPARGC1AQ9UBK2 RNU6-103P-201ENST00000363686 107 ntBASIC2.95□□□□□ -1.94
PPARGC1AQ9UBK2 Y_RNA.238-201ENST00000364441 102 ntBASIC2.95□□□□□ -1.94
PPARGC1AQ9UBK2 MIR526A2-201ENST00000390198 65 ntBASIC2.95□□□□□ -1.94
PPARGC1AQ9UBK2 AL355796.1-201ENST00000406706 323 ntBASIC2.95□□□□□ -1.94
PPARGC1AQ9UBK2 AL357134.1-201ENST00000445848 426 ntBASIC2.95□□□□□ -1.94
PPARGC1AQ9UBK2 HMGN2P18-201ENST00000450680 270 ntBASIC2.95□□□□□ -1.94
PPARGC1AQ9UBK2 SNORD65B-201ENST00000459126 73 ntBASIC2.95□□□□□ -1.94
PPARGC1AQ9UBK2 AC091021.1-201ENST00000468051 388 ntBASIC2.95□□□□□ -1.94
PPARGC1AQ9UBK2 RPS26P55-201ENST00000471178 356 ntBASIC2.95□□□□□ -1.94
PPARGC1AQ9UBK2 RNU6-1278P-201ENST00000516130 107 ntBASIC2.95□□□□□ -1.94
PPARGC1AQ9UBK2 RNA5SP490-201ENST00000517141 136 ntBASIC2.95□□□□□ -1.94
PPARGC1AQ9UBK2 AC025647.1-201ENST00000517879 253 ntBASIC2.95□□□□□ -1.94
PPARGC1AQ9UBK2 MIR1248-201ENST00000629190 106 ntBASIC2.95□□□□□ -1.94
PPARGC1AQ9UBK2 MAPK10-266ENST00000641066 6555 ntBASIC2.95□□□□□ -1.94
PPARGC1AQ9UBK2 Y_RNA.23-201ENST00000362496 106 ntBASIC2.94□□□□□ -1.94
PPARGC1AQ9UBK2 MIR512-1-201ENST00000384913 84 ntBASIC2.94□□□□□ -1.94
PPARGC1AQ9UBK2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PPARGC1AQ9UBK2 RNU6-381P-201ENST00000391259 108 ntBASIC2.94□□□□□ -1.94
PPARGC1AQ9UBK2 RNU6-394P-201ENST00000410735 107 ntBASIC2.94□□□□□ -1.94
PPARGC1AQ9UBK2 Z92545.1-201ENST00000411782 234 ntBASIC2.94□□□□□ -1.94
PPARGC1AQ9UBK2 AC003685.2-201ENST00000422795 395 ntBASIC2.94□□□□□ -1.94
PPARGC1AQ9UBK2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.94□□□□□ -1.94
PPARGC1AQ9UBK2 RPS29P6-201ENST00000438196 145 ntBASIC2.94□□□□□ -1.94
PPARGC1AQ9UBK2 AC107083.1-201ENST00000439643 279 ntBASIC2.94□□□□□ -1.94
PPARGC1AQ9UBK2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.94□□□□□ -1.94
PPARGC1AQ9UBK2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.94□□□□□ -1.94
PPARGC1AQ9UBK2 RPS20P10-201ENST00000451209 253 ntBASIC2.94□□□□□ -1.94
PPARGC1AQ9UBK2 AL137159.1-201ENST00000452808 512 ntBASIC2.94□□□□□ -1.94
PPARGC1AQ9UBK2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.94□□□□□ -1.94
PPARGC1AQ9UBK2 Y_RNA.802-201ENST00000614892 130 ntBASIC2.94□□□□□ -1.94
PPARGC1AQ9UBK2 AC134026.1-201ENST00000623249 2239 ntBASIC2.93□□□□□ -1.94
PPARGC1AQ9UBK2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PPARGC1AQ9UBK2 MIR626-201ENST00000385032 94 ntBASIC2.93□□□□□ -1.94
PPARGC1AQ9UBK2 MTCO2P33-201ENST00000402100 465 ntBASIC2.93□□□□□ -1.94
PPARGC1AQ9UBK2 AL590004.2-201ENST00000404787 371 ntBASIC2.93□□□□□ -1.94
PPARGC1AQ9UBK2 RNU6-1135P-201ENST00000411083 103 ntBASIC2.93□□□□□ -1.94
PPARGC1AQ9UBK2 CR769767.1-201ENST00000436337 346 ntBASIC2.93□□□□□ -1.94
PPARGC1AQ9UBK2 RNU7-26P-201ENST00000458980 63 ntBASIC2.93□□□□□ -1.94
PPARGC1AQ9UBK2 RPS27AP9-201ENST00000477681 438 ntBASIC2.93□□□□□ -1.94
PPARGC1AQ9UBK2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.93□□□□□ -1.94
PPARGC1AQ9UBK2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 Y_RNA.124-201ENST00000363339 93 ntBASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 RNU6-1205P-201ENST00000363625 106 ntBASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 RNU6-1240P-201ENST00000365155 104 ntBASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 Y_RNA.332-201ENST00000365271 113 ntBASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 Y_RNA.506-201ENST00000384494 102 ntBASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 MIR561-201ENST00000385216 97 ntBASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 RN7SKP51-201ENST00000410781 304 ntBASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 AC123900.1-201ENST00000420390 96 ntBASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 AL135938.1-201ENST00000443141 297 ntBASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 RNU7-141P-201ENST00000459304 62 ntBASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 AC093259.1-201ENST00000509755 300 ntBASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 RNU6-965P-201ENST00000516721 96 ntBASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PPARGC1AQ9UBK2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 Y_RNA.170-201ENST00000363746 110 ntBASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 Y_RNA.293-201ENST00000364908 93 ntBASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 RNU6-1323P-201ENST00000384025 107 ntBASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 SNORD14D-201ENST00000384390 87 ntBASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 RNU6-125P-201ENST00000384505 107 ntBASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 MIR181A2-201ENST00000384863 110 ntBASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 RNU6-220P-201ENST00000390919 107 ntBASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 AC016717.1-201ENST00000448918 286 ntBASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 AC010531.2-201ENST00000465012 153 ntBASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 RNU6-1337P-201ENST00000516525 95 ntBASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 RNU7-116P-201ENST00000516940 62 ntBASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 MIR3144-201ENST00000579460 79 ntBASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 MIR548AY-201ENST00000617669 107 ntBASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
PPARGC1AQ9UBK2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 211.2 ms