Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 SNORD115-2-201ENST00000362842 82 ntBASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 Y_RNA.171-201ENST00000363760 102 ntBASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 SNORD114-6-201ENST00000364393 72 ntBASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 SNORA68.1-201ENST00000364537 132 ntBASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 RNA5SP513-201ENST00000364648 118 ntBASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 SNORD115-20-201ENST00000365099 82 ntBASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 RNY1P4-201ENST00000384595 115 ntBASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 RNA5SP397-201ENST00000391323 118 ntBASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 SNORA11.4-201ENST00000408823 129 ntBASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 RNA5SP261-201ENST00000410536 106 ntBASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 Y_RNA.611-201ENST00000410682 108 ntBASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 RN7SKP213-201ENST00000410746 298 ntBASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 RPL23AP27-201ENST00000415161 451 ntBASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 UBL5P3-201ENST00000475112 231 ntBASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 RNA5SP33-201ENST00000516687 98 ntBASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 MIR6768-201ENST00000610734 72 ntBASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 AC245060.5-201ENST00000610778 3293 ntBASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
KRTAP3-1Q9BYR8 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 SNORA22.1-201ENST00000362701 134 ntBASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 SNORA1.2-201ENST00000365189 134 ntBASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 Y_RNA.430-201ENST00000384081 110 ntBASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 RNU6-1319P-201ENST00000390855 104 ntBASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 RNU6-747P-201ENST00000390928 104 ntBASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 U8.15-201ENST00000390947 134 ntBASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 RNU6-241P-201ENST00000391148 104 ntBASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 SNORA3C-201ENST00000408792 125 ntBASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 RNU6-177P-201ENST00000411257 104 ntBASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 U3.44-201ENST00000458938 192 ntBASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 AC108729.3-201ENST00000513484 108 ntBASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 SNORA31.4-201ENST00000516049 129 ntBASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 AL360157.1-201ENST00000565962 87 ntBASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 MIR548AE2-201ENST00000583456 67 ntBASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 AC110741.2-201ENST00000605278 268 ntBASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 SPATA31D2P-201ENST00000429999 4388 ntBASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP3-1Q9BYR8 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP3-1Q9BYR8 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 SDAD1P1-202ENST00000524156 2051 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 RNA5SP175-201ENST00000364275 119 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 RNU6-776P-201ENST00000364403 104 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 SNORA70.2-201ENST00000364506 135 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 RNU6-1022P-201ENST00000365049 104 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 SNORA25B-201ENST00000365507 128 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 CD24P4-201ENST00000382840 243 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 SNORA70F-201ENST00000384142 135 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 RNU6-1072P-201ENST00000384703 107 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 RNU6-443P-201ENST00000384780 107 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 RNU1-101P-201ENST00000391171 127 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 SNORA26.7-201ENST00000391288 122 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 AC015922.2-201ENST00000435593 184 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 AL606517.2-201ENST00000442855 241 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 HMGN2P7-201ENST00000456186 273 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 RN7SL271P-201ENST00000487601 295 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 AC018868.1-201ENST00000491307 315 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 RNU7-53P-201ENST00000516705 60 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 AC091042.1-201ENST00000579213 173 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 AC006160.2-201ENST00000637708 154 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 MIR4302-201ENST00000638058 60 ntBASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.15□□□□□ -2.07
KRTAP3-1Q9BYR8 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
KRTAP3-1Q9BYR8 GHR-213ENST00000622294 4312 ntTSL 5 BASIC2.14□□□□□ -2.07
KRTAP3-1Q9BYR8 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
KRTAP3-1Q9BYR8 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
KRTAP3-1Q9BYR8 MIR331-201ENST00000362302 94 ntBASIC2.14□□□□□ -2.07
KRTAP3-1Q9BYR8 Y_RNA.4-201ENST00000362333 112 ntBASIC2.14□□□□□ -2.07
KRTAP3-1Q9BYR8 RNA5SP507-201ENST00000363603 121 ntBASIC2.14□□□□□ -2.07
KRTAP3-1Q9BYR8 SNORD58A-201ENST00000383875 65 ntBASIC2.14□□□□□ -2.07
KRTAP3-1Q9BYR8 RNA5SP109-201ENST00000391010 116 ntBASIC2.14□□□□□ -2.07
KRTAP3-1Q9BYR8 Y_RNA.607-201ENST00000410597 98 ntBASIC2.14□□□□□ -2.07
KRTAP3-1Q9BYR8 Z92545.1-201ENST00000411782 234 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 188 ms