Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 Y_RNA.319-201ENST00000365138 92 ntBASIC1.09□□□□□ -2.23
FOXC2Q99958 RNU6-1283P-201ENST00000365314 105 ntBASIC1.09□□□□□ -2.23
FOXC2Q99958 Y_RNA.482-201ENST00000384377 111 ntBASIC1.09□□□□□ -2.23
FOXC2Q99958 MIR10B-201ENST00000385011 110 ntBASIC1.09□□□□□ -2.23
FOXC2Q99958 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
FOXC2Q99958 MRPL35P1-201ENST00000404272 572 ntBASIC1.09□□□□□ -2.23
FOXC2Q99958 MIR548F5-201ENST00000408421 86 ntBASIC1.09□□□□□ -2.23
FOXC2Q99958 AC074085.1-201ENST00000413598 418 ntBASIC1.09□□□□□ -2.23
FOXC2Q99958 AC016909.1-201ENST00000415916 166 ntBASIC1.09□□□□□ -2.23
FOXC2Q99958 AL139396.1-201ENST00000421137 167 ntBASIC1.09□□□□□ -2.23
FOXC2Q99958 AC016717.1-201ENST00000448918 286 ntBASIC1.09□□□□□ -2.23
FOXC2Q99958 RNU6-1016P-201ENST00000516689 94 ntBASIC1.09□□□□□ -2.23
FOXC2Q99958 RNU7-30P-201ENST00000516835 62 ntBASIC1.09□□□□□ -2.23
FOXC2Q99958 RNU1-54P-201ENST00000517181 120 ntBASIC1.09□□□□□ -2.23
FOXC2Q99958 AL590705.4-201ENST00000532209 134 ntBASIC1.09□□□□□ -2.23
FOXC2Q99958 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.09□□□□□ -2.23
FOXC2Q99958 AC005730.3-201ENST00000583067 366 ntBASIC1.09□□□□□ -2.23
FOXC2Q99958 AC093913.1-201ENST00000614178 329 ntBASIC1.09□□□□□ -2.23
FOXC2Q99958 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.09□□□□□ -2.23
FOXC2Q99958 MIR338-201ENST00000636369 67 ntBASIC1.09□□□□□ -2.23
FOXC2Q99958 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
FOXC2Q99958 Y_RNA.405-201ENST00000383979 100 ntBASIC1.08□□□□□ -2.24
FOXC2Q99958 Y_RNA.451-201ENST00000384200 100 ntBASIC1.08□□□□□ -2.24
FOXC2Q99958 Y_RNA.473-201ENST00000384333 102 ntBASIC1.08□□□□□ -2.24
FOXC2Q99958 Y_RNA.524-201ENST00000384564 100 ntBASIC1.08□□□□□ -2.24
FOXC2Q99958 Y_RNA.561-201ENST00000384694 100 ntBASIC1.08□□□□□ -2.24
FOXC2Q99958 RNU1-139P-201ENST00000391307 165 ntBASIC1.08□□□□□ -2.24
FOXC2Q99958 Y_RNA.594-201ENST00000410373 140 ntBASIC1.08□□□□□ -2.24
FOXC2Q99958 RNU6-1050P-201ENST00000410388 107 ntBASIC1.08□□□□□ -2.24
FOXC2Q99958 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.08□□□□□ -2.24
FOXC2Q99958 snoU13.27-201ENST00000459278 104 ntBASIC1.08□□□□□ -2.24
FOXC2Q99958 AP000870.1-201ENST00000472927 406 ntBASIC1.08□□□□□ -2.24
FOXC2Q99958 RNU7-175P-201ENST00000515915 61 ntBASIC1.08□□□□□ -2.24
FOXC2Q99958 AC105029.1-201ENST00000520250 669 ntBASIC1.08□□□□□ -2.24
FOXC2Q99958 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.08□□□□□ -2.24
FOXC2Q99958 AC008269.2-201ENST00000561915 1105 ntBASIC1.08□□□□□ -2.24
FOXC2Q99958 MIR3937-201ENST00000580135 106 ntBASIC1.08□□□□□ -2.24
FOXC2Q99958 MIR4273-201ENST00000582824 84 ntBASIC1.08□□□□□ -2.24
FOXC2Q99958 MIR4753-201ENST00000585119 83 ntBASIC1.08□□□□□ -2.24
FOXC2Q99958 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.08□□□□□ -2.24
FOXC2Q99958 Y_RNA.48-201ENST00000362710 103 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 Y_RNA.160-201ENST00000363677 92 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 RNU6-873P-201ENST00000363833 107 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 RNU6-1305P-201ENST00000364353 104 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
FOXC2Q99958 Y_RNA.390-201ENST00000383932 102 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 Y_RNA.404-201ENST00000383978 102 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 RNU6-281P-201ENST00000384212 103 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 RNU6-1065P-201ENST00000384513 106 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 MIR150-201ENST00000385048 84 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 RNU4-14P-201ENST00000410858 122 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 AC138393.2-201ENST00000414742 246 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 AC073910.1-201ENST00000445047 438 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.07□□□□□ -2.24
FOXC2Q99958 RNU7-57P-201ENST00000459540 60 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 RNU6-221P-201ENST00000459541 99 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 AC091179.3-201ENST00000474761 144 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 AC093303.1-201ENST00000514549 295 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 RNA5SP61-201ENST00000516453 100 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 SNORA20.3-201ENST00000516880 132 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 AC019176.1-201ENST00000518519 225 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 AC134698.4-201ENST00000523451 826 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 AC019288.1-201ENST00000557918 224 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 UBL5P4-201ENST00000562584 236 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.07□□□□□ -2.24
FOXC2Q99958 AL355802.3-201ENST00000607571 545 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.07□□□□□ -2.24
FOXC2Q99958 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.07□□□□□ -2.24
FOXC2Q99958 RNU6-874P-201ENST00000362390 105 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 Y_RNA.287-201ENST00000364853 94 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 SNORD81.2-201ENST00000365153 76 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 Y_RNA.474-201ENST00000384341 102 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 RNU6-1105P-201ENST00000384774 107 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 MIR618-201ENST00000385287 98 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 MIR320B2-201ENST00000408479 138 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 MIR1185-2-201ENST00000408687 86 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.06□□□□□ -2.24
FOXC2Q99958 EIF1P2-201ENST00000428233 350 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 MTND3P23-201ENST00000431980 347 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 HMGN2P34-201ENST00000437647 269 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.06□□□□□ -2.24
FOXC2Q99958 SNORA25.14-201ENST00000516481 132 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 RNU6-113P-201ENST00000516653 101 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 AC025647.1-201ENST00000517879 253 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.06□□□□□ -2.24
FOXC2Q99958 AL121579.1-201ENST00000555129 305 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.06□□□□□ -2.24
FOXC2Q99958 SNORD11B-201ENST00000607707 90 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 snoZ196.1-201ENST00000625269 89 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 MIR6767-201ENST00000637302 66 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 U6.108-201ENST00000637764 58 ntBASIC1.06□□□□□ -2.24
FOXC2Q99958 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
FOXC2Q99958 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.05□□□□□ -2.24
FOXC2Q99958 snoU2-30.2-201ENST00000362805 70 ntBASIC1.05□□□□□ -2.24
FOXC2Q99958 U3.8-201ENST00000363675 217 ntBASIC1.05□□□□□ -2.24
FOXC2Q99958 SNORA72.2-201ENST00000365028 127 ntBASIC1.05□□□□□ -2.24
FOXC2Q99958 RNU6-939P-201ENST00000384634 107 ntBASIC1.05□□□□□ -2.24
FOXC2Q99958 RPL37P10-201ENST00000412884 288 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 214.8 ms