Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 MIR3192-201ENST00000584920 77 ntBASIC0.33□□□□□ -2.36
LRRC39Q96DD0 AC093913.1-201ENST00000614178 329 ntBASIC0.33□□□□□ -2.36
LRRC39Q96DD0 AL158063.1-201ENST00000615349 536 ntBASIC0.33□□□□□ -2.36
LRRC39Q96DD0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.33□□□□□ -2.36
LRRC39Q96DD0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
LRRC39Q96DD0 MIR103A2-201ENST00000362154 78 ntBASIC0.32□□□□□ -2.36
LRRC39Q96DD0 Y_RNA.201-201ENST00000364052 96 ntBASIC0.32□□□□□ -2.36
LRRC39Q96DD0 Y_RNA.336-201ENST00000365307 109 ntBASIC0.32□□□□□ -2.36
LRRC39Q96DD0 RNY3P9-201ENST00000384727 106 ntBASIC0.32□□□□□ -2.36
LRRC39Q96DD0 MIR153-2-201ENST00000385225 87 ntBASIC0.32□□□□□ -2.36
LRRC39Q96DD0 MIR891A-201ENST00000401237 79 ntBASIC0.32□□□□□ -2.36
LRRC39Q96DD0 AL365203.2-201ENST00000423444 196 ntBASIC0.32□□□□□ -2.36
LRRC39Q96DD0 MTCO2P12-201ENST00000427426 682 ntBASIC0.32□□□□□ -2.36
LRRC39Q96DD0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.32□□□□□ -2.36
LRRC39Q96DD0 MTND4P18-201ENST00000447010 465 ntBASIC0.32□□□□□ -2.36
LRRC39Q96DD0 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
LRRC39Q96DD0 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.32□□□□□ -2.36
LRRC39Q96DD0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.32□□□□□ -2.36
LRRC39Q96DD0 AC011195.1-201ENST00000578177 177 ntBASIC0.32□□□□□ -2.36
LRRC39Q96DD0 AC091178.2-201ENST00000584401 117 ntBASIC0.32□□□□□ -2.36
LRRC39Q96DD0 MIR5692C1-201ENST00000585309 91 ntBASIC0.32□□□□□ -2.36
LRRC39Q96DD0 AL357078.3-201ENST00000607528 618 ntBASIC0.32□□□□□ -2.36
LRRC39Q96DD0 AC027279.3-201ENST00000625055 122 ntBASIC0.32□□□□□ -2.36
LRRC39Q96DD0 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.32□□□□□ -2.36
LRRC39Q96DD0 MTND4P12-201ENST00000498999 1377 ntBASIC0.32□□□□□ -2.36
LRRC39Q96DD0 Y_RNA.319-201ENST00000365138 92 ntBASIC0.31□□□□□ -2.36
LRRC39Q96DD0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
LRRC39Q96DD0 AC244098.3-201ENST00000424803 96 ntBASIC0.31□□□□□ -2.36
LRRC39Q96DD0 AC027288.2-201ENST00000553028 243 ntBASIC0.31□□□□□ -2.36
LRRC39Q96DD0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.31□□□□□ -2.36
LRRC39Q96DD0 PIGPP4-201ENST00000584447 307 ntBASIC0.31□□□□□ -2.36
LRRC39Q96DD0 AC092747.3-201ENST00000603769 301 ntBASIC0.31□□□□□ -2.36
LRRC39Q96DD0 AC022960.3-201ENST00000619794 441 ntBASIC0.31□□□□□ -2.36
LRRC39Q96DD0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.31□□□□□ -2.36
LRRC39Q96DD0 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.31□□□□□ -2.36
LRRC39Q96DD0 AL589743.1-201ENST00000551932 2712 ntBASIC0.31□□□□□ -2.36
LRRC39Q96DD0 AC005592.1-201ENST00000566527 1640 ntBASIC0.31□□□□□ -2.36
LRRC39Q96DD0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.3□□□□□ -2.36
LRRC39Q96DD0 Y_RNA.184-201ENST00000363884 108 ntBASIC0.3□□□□□ -2.36
LRRC39Q96DD0 VTRNA1-3-201ENST00000365645 89 ntBASIC0.3□□□□□ -2.36
LRRC39Q96DD0 SNORA36.2-201ENST00000384004 127 ntBASIC0.3□□□□□ -2.36
LRRC39Q96DD0 RNU6-1105P-201ENST00000384774 107 ntBASIC0.3□□□□□ -2.36
LRRC39Q96DD0 RNA5SP193-201ENST00000410353 107 ntBASIC0.3□□□□□ -2.36
LRRC39Q96DD0 RNA5SP222-201ENST00000411039 105 ntBASIC0.3□□□□□ -2.36
LRRC39Q96DD0 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.3□□□□□ -2.36
LRRC39Q96DD0 MTND1P27-201ENST00000451117 902 ntBASIC0.3□□□□□ -2.36
LRRC39Q96DD0 AC091885.1-201ENST00000506658 268 ntBASIC0.3□□□□□ -2.36
LRRC39Q96DD0 SNORA19.2-201ENST00000516013 114 ntBASIC0.3□□□□□ -2.36
LRRC39Q96DD0 RNU11-2P-201ENST00000516898 142 ntBASIC0.3□□□□□ -2.36
LRRC39Q96DD0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.3□□□□□ -2.36
LRRC39Q96DD0 AC023157.2-201ENST00000540596 141 ntBASIC0.3□□□□□ -2.36
LRRC39Q96DD0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.3□□□□□ -2.36
LRRC39Q96DD0 AL133215.3-201ENST00000609801 448 ntBASIC0.3□□□□□ -2.36
LRRC39Q96DD0 AC073544.1-201ENST00000600110 1595 ntBASIC0.29□□□□□ -2.36
LRRC39Q96DD0 SNORA1B-201ENST00000362535 133 ntBASIC0.29□□□□□ -2.36
LRRC39Q96DD0 RNU6-873P-201ENST00000363833 107 ntBASIC0.29□□□□□ -2.36
LRRC39Q96DD0 Y_RNA.415-201ENST00000384012 112 ntBASIC0.29□□□□□ -2.36
LRRC39Q96DD0 RNU6-1103P-201ENST00000384150 107 ntBASIC0.29□□□□□ -2.36
LRRC39Q96DD0 MIR32-201ENST00000384965 70 ntBASIC0.29□□□□□ -2.36
LRRC39Q96DD0 MIR216A-201ENST00000385063 110 ntBASIC0.29□□□□□ -2.36
LRRC39Q96DD0 SNORD111-201ENST00000408139 94 ntBASIC0.29□□□□□ -2.36
LRRC39Q96DD0 MTND2P18-201ENST00000419962 1030 ntBASIC0.29□□□□□ -2.36
LRRC39Q96DD0 MRPS10P2-201ENST00000431226 381 ntBASIC0.29□□□□□ -2.36
LRRC39Q96DD0 MTCO2P16-201ENST00000436962 677 ntBASIC0.29□□□□□ -2.36
LRRC39Q96DD0 DAP3P1-201ENST00000441522 278 ntBASIC0.29□□□□□ -2.36
LRRC39Q96DD0 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
LRRC39Q96DD0 Y_RNA.654-201ENST00000497848 106 ntBASIC0.29□□□□□ -2.36
LRRC39Q96DD0 AC092436.3-201ENST00000511788 257 ntBASIC0.29□□□□□ -2.36
LRRC39Q96DD0 AC093303.1-201ENST00000514549 295 ntBASIC0.29□□□□□ -2.36
LRRC39Q96DD0 MIR3915-201ENST00000578518 97 ntBASIC0.29□□□□□ -2.36
LRRC39Q96DD0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.29□□□□□ -2.36
LRRC39Q96DD0 AL354950.2-201ENST00000617939 290 ntBASIC0.29□□□□□ -2.36
LRRC39Q96DD0 SNORD114-23-201ENST00000363536 72 ntBASIC0.28□□□□□ -2.36
LRRC39Q96DD0 RNU6-342P-201ENST00000384521 104 ntBASIC0.28□□□□□ -2.36
LRRC39Q96DD0 MIR526A1-201ENST00000384897 85 ntBASIC0.28□□□□□ -2.36
LRRC39Q96DD0 MIR452-201ENST00000385020 85 ntBASIC0.28□□□□□ -2.36
LRRC39Q96DD0 MT-TH-201ENST00000387441 69 ntBASIC0.28□□□□□ -2.36
LRRC39Q96DD0 CALM2P3-201ENST00000400429 449 ntBASIC0.28□□□□□ -2.36
LRRC39Q96DD0 MTATP6P19-201ENST00000413797 659 ntBASIC0.28□□□□□ -2.36
LRRC39Q96DD0 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.28□□□□□ -2.36
LRRC39Q96DD0 AL353572.1-201ENST00000442490 417 ntBASIC0.28□□□□□ -2.36
LRRC39Q96DD0 AC091021.1-201ENST00000468051 388 ntBASIC0.28□□□□□ -2.36
LRRC39Q96DD0 AC091179.3-201ENST00000474761 144 ntBASIC0.28□□□□□ -2.36
LRRC39Q96DD0 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.28□□□□□ -2.36
LRRC39Q96DD0 CYCTP-201ENST00000504253 315 ntBASIC0.28□□□□□ -2.36
LRRC39Q96DD0 RNU6-759P-201ENST00000516740 103 ntBASIC0.28□□□□□ -2.36
LRRC39Q96DD0 AC007742.2-201ENST00000618226 398 ntBASIC0.28□□□□□ -2.36
LRRC39Q96DD0 AC006504.8-201ENST00000621046 635 ntBASIC0.28□□□□□ -2.36
LRRC39Q96DD0 MTND5P16-201ENST00000460269 1703 ntBASIC0.27□□□□□ -2.37
LRRC39Q96DD0 Y_RNA.267-201ENST00000364679 109 ntBASIC0.27□□□□□ -2.37
LRRC39Q96DD0 RNU6-159P-201ENST00000391080 106 ntBASIC0.27□□□□□ -2.37
LRRC39Q96DD0 MTCO1P20-201ENST00000425366 358 ntBASIC0.27□□□□□ -2.37
LRRC39Q96DD0 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.27□□□□□ -2.37
LRRC39Q96DD0 RPS20P10-201ENST00000451209 253 ntBASIC0.27□□□□□ -2.37
LRRC39Q96DD0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.27□□□□□ -2.37
LRRC39Q96DD0 AC079354.2-201ENST00000453523 154 ntBASIC0.27□□□□□ -2.37
LRRC39Q96DD0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.27□□□□□ -2.37
LRRC39Q96DD0 SNORA68.3-201ENST00000515906 83 ntBASIC0.27□□□□□ -2.37
LRRC39Q96DD0 AL158209.2-201ENST00000619266 216 ntBASIC0.27□□□□□ -2.37
LRRC39Q96DD0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 204.2 ms