Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RPS15AP28-201ENST00000435088 386 ntBASIC2.91□□□□□ -1.94
SYNE4Q8N205 RNU6-1198P-201ENST00000516904 67 ntBASIC2.91□□□□□ -1.94
SYNE4Q8N205 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.91□□□□□ -1.94
SYNE4Q8N205 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.91□□□□□ -1.94
SYNE4Q8N205 AC067747.1-201ENST00000608026 250 ntBASIC2.91□□□□□ -1.94
SYNE4Q8N205 AC004832.4-201ENST00000608952 331 ntBASIC2.91□□□□□ -1.94
SYNE4Q8N205 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SYNE4Q8N205 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.9□□□□□ -1.94
SYNE4Q8N205 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
SYNE4Q8N205 RNU6-1272P-201ENST00000362776 107 ntBASIC2.9□□□□□ -1.95
SYNE4Q8N205 SNORD87-201ENST00000364849 89 ntBASIC2.9□□□□□ -1.95
SYNE4Q8N205 Y_RNA.435-201ENST00000384095 112 ntBASIC2.9□□□□□ -1.95
SYNE4Q8N205 AL023284.1-201ENST00000403956 276 ntBASIC2.9□□□□□ -1.95
SYNE4Q8N205 AL357139.1-201ENST00000407792 426 ntBASIC2.9□□□□□ -1.95
SYNE4Q8N205 MIR1287-201ENST00000408492 90 ntBASIC2.9□□□□□ -1.95
SYNE4Q8N205 RNA5SP504-201ENST00000410676 117 ntBASIC2.9□□□□□ -1.95
SYNE4Q8N205 BTF3P11-201ENST00000426582 477 ntBASIC2.9□□□□□ -1.95
SYNE4Q8N205 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
SYNE4Q8N205 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.9□□□□□ -1.95
SYNE4Q8N205 AL441985.1-201ENST00000457727 251 ntBASIC2.9□□□□□ -1.95
SYNE4Q8N205 Y_RNA.637-201ENST00000459424 114 ntBASIC2.9□□□□□ -1.95
SYNE4Q8N205 AIG1P1-201ENST00000503376 148 ntBASIC2.9□□□□□ -1.95
SYNE4Q8N205 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.9□□□□□ -1.95
SYNE4Q8N205 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.9□□□□□ -1.95
SYNE4Q8N205 SUMO2P18-201ENST00000518873 252 ntBASIC2.9□□□□□ -1.95
SYNE4Q8N205 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.9□□□□□ -1.95
SYNE4Q8N205 CYP4A27P-201ENST00000567218 190 ntBASIC2.9□□□□□ -1.95
SYNE4Q8N205 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.9□□□□□ -1.95
SYNE4Q8N205 MIR6733-201ENST00000635723 61 ntBASIC2.9□□□□□ -1.95
SYNE4Q8N205 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
SYNE4Q8N205 AC099654.7-201ENST00000635788 2127 ntBASIC2.9□□□□□ -1.95
SYNE4Q8N205 AC002543.1-201ENST00000299783 1954 ntBASIC2.89□□□□□ -1.95
SYNE4Q8N205 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.89□□□□□ -1.95
SYNE4Q8N205 AL356292.1-201ENST00000283110 373 ntBASIC2.89□□□□□ -1.95
SYNE4Q8N205 RNU6-1010P-201ENST00000362757 107 ntBASIC2.89□□□□□ -1.95
SYNE4Q8N205 RNA5SP139-201ENST00000364340 117 ntBASIC2.89□□□□□ -1.95
SYNE4Q8N205 Y_RNA.329-201ENST00000365209 107 ntBASIC2.89□□□□□ -1.95
SYNE4Q8N205 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.89□□□□□ -1.95
SYNE4Q8N205 RNU6-1027P-201ENST00000383998 107 ntBASIC2.89□□□□□ -1.95
SYNE4Q8N205 SNORA64-201ENST00000384674 134 ntBASIC2.89□□□□□ -1.95
SYNE4Q8N205 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.89□□□□□ -1.95
SYNE4Q8N205 AC112771.1-201ENST00000463581 102 ntBASIC2.89□□□□□ -1.95
SYNE4Q8N205 AC140059.1-201ENST00000489238 361 ntBASIC2.89□□□□□ -1.95
SYNE4Q8N205 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.89□□□□□ -1.95
SYNE4Q8N205 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.89□□□□□ -1.95
SYNE4Q8N205 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.89□□□□□ -1.95
SYNE4Q8N205 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.89□□□□□ -1.95
SYNE4Q8N205 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.89□□□□□ -1.95
SYNE4Q8N205 AC008739.2-201ENST00000597006 317 ntBASIC2.89□□□□□ -1.95
SYNE4Q8N205 AL034555.1-201ENST00000604816 211 ntBASIC2.89□□□□□ -1.95
SYNE4Q8N205 uc_338.14-201ENST00000613162 166 ntBASIC2.89□□□□□ -1.95
SYNE4Q8N205 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.89□□□□□ -1.95
SYNE4Q8N205 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SYNE4Q8N205 RNU4-15P-201ENST00000362613 141 ntBASIC2.88□□□□□ -1.95
SYNE4Q8N205 Y_RNA.262-201ENST00000364641 102 ntBASIC2.88□□□□□ -1.95
SYNE4Q8N205 MIR613-201ENST00000385248 95 ntBASIC2.88□□□□□ -1.95
SYNE4Q8N205 RNU2-54P-201ENST00000410299 190 ntBASIC2.88□□□□□ -1.95
SYNE4Q8N205 RNA5SP201-201ENST00000410316 124 ntBASIC2.88□□□□□ -1.95
SYNE4Q8N205 RN7SKP123-201ENST00000410732 291 ntBASIC2.88□□□□□ -1.95
SYNE4Q8N205 AIMP1P2-201ENST00000425294 312 ntBASIC2.88□□□□□ -1.95
SYNE4Q8N205 AC104332.2-201ENST00000429959 156 ntBASIC2.88□□□□□ -1.95
SYNE4Q8N205 Z98742.2-201ENST00000431564 187 ntBASIC2.88□□□□□ -1.95
SYNE4Q8N205 U8.19-201ENST00000459095 133 ntBASIC2.88□□□□□ -1.95
SYNE4Q8N205 RNU2-12P-201ENST00000517216 168 ntBASIC2.88□□□□□ -1.95
SYNE4Q8N205 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.88□□□□□ -1.95
SYNE4Q8N205 AC105137.2-201ENST00000569073 466 ntBASIC2.88□□□□□ -1.95
SYNE4Q8N205 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.88□□□□□ -1.95
SYNE4Q8N205 AC005520.5-201ENST00000613926 164 ntBASIC2.88□□□□□ -1.95
SYNE4Q8N205 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.88□□□□□ -1.95
SYNE4Q8N205 MIR3674-201ENST00000636576 68 ntBASIC2.88□□□□□ -1.95
SYNE4Q8N205 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
SYNE4Q8N205 SNORD114-19-201ENST00000363072 75 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 SNORD116-18-201ENST00000383961 92 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 Y_RNA.412-201ENST00000384001 104 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 Y_RNA.441-201ENST00000384123 112 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 RNU6-763P-201ENST00000390865 106 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 RNU2-2P-201ENST00000410396 191 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 CYCSP48-201ENST00000417124 323 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.87□□□□□ -1.95
SYNE4Q8N205 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.87□□□□□ -1.95
SYNE4Q8N205 RPL31P41-201ENST00000477967 372 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 RNU6-436P-201ENST00000516171 114 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 AC079598.5-201ENST00000547460 117 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 MIR5007-201ENST00000583098 95 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 AC023043.3-201ENST00000593113 385 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 RNU2-4P-201ENST00000606190 192 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 U2.15-201ENST00000611544 191 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 U2.16-201ENST00000613119 191 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 U2.12-201ENST00000613778 191 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 U2.9-201ENST00000615427 191 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 U2.11-201ENST00000616345 191 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 U2.2-201ENST00000616535 191 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 U2.3-201ENST00000617785 191 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 U2.19-201ENST00000618602 191 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 RNU2-1-201ENST00000618664 191 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 U2.6-201ENST00000619225 191 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 U2.5-201ENST00000619465 191 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 U2.10-201ENST00000620268 191 ntBASIC2.87□□□□□ -1.95
SYNE4Q8N205 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms