Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 NDUFB9P3-201ENST00000521269 501 ntBASIC3.5□□□□□ -1.85
NFKB1P19838 MIR5582-201ENST00000579697 68 ntBASIC3.5□□□□□ -1.85
NFKB1P19838 MIR7851-201ENST00000610611 160 ntBASIC3.5□□□□□ -1.85
NFKB1P19838 uc_338.28-201ENST00000612082 187 ntBASIC3.5□□□□□ -1.85
NFKB1P19838 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
NFKB1P19838 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
NFKB1P19838 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
NFKB1P19838 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NFKB1P19838 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NFKB1P19838 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
NFKB1P19838 Y_RNA.116-201ENST00000363292 103 ntBASIC3.49□□□□□ -1.85
NFKB1P19838 SNORA70.4-201ENST00000365509 134 ntBASIC3.49□□□□□ -1.85
NFKB1P19838 MIR184-201ENST00000384962 84 ntBASIC3.49□□□□□ -1.85
NFKB1P19838 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.49□□□□□ -1.85
NFKB1P19838 AC009414.1-201ENST00000427200 443 ntBASIC3.49□□□□□ -1.85
NFKB1P19838 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.49□□□□□ -1.85
NFKB1P19838 SCARNA17.1-201ENST00000516211 143 ntBASIC3.49□□□□□ -1.85
NFKB1P19838 SCARNA17.2-201ENST00000516334 143 ntBASIC3.49□□□□□ -1.85
NFKB1P19838 MIR2276-201ENST00000516886 89 ntBASIC3.49□□□□□ -1.85
NFKB1P19838 RNU6-365P-201ENST00000517113 106 ntBASIC3.49□□□□□ -1.85
NFKB1P19838 AC026403.1-201ENST00000518938 295 ntBASIC3.49□□□□□ -1.85
NFKB1P19838 MIR3922-201ENST00000585192 84 ntBASIC3.49□□□□□ -1.85
NFKB1P19838 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.49□□□□□ -1.85
NFKB1P19838 SCARNA17.4-201ENST00000614296 143 ntBASIC3.49□□□□□ -1.85
NFKB1P19838 MIR8058-201ENST00000615737 89 ntBASIC3.49□□□□□ -1.85
NFKB1P19838 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NFKB1P19838 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
NFKB1P19838 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
NFKB1P19838 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
NFKB1P19838 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NFKB1P19838 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
NFKB1P19838 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NFKB1P19838 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.48□□□□□ -1.85
NFKB1P19838 RNU4-35P-201ENST00000362588 141 ntBASIC3.48□□□□□ -1.85
NFKB1P19838 Y_RNA.333-201ENST00000365274 102 ntBASIC3.48□□□□□ -1.85
NFKB1P19838 SNORD17-201ENST00000390930 237 ntBASIC3.48□□□□□ -1.85
NFKB1P19838 GOT2P5-201ENST00000433995 546 ntBASIC3.48□□□□□ -1.85
NFKB1P19838 AF228730.3-201ENST00000436691 102 ntBASIC3.48□□□□□ -1.85
NFKB1P19838 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.48□□□□□ -1.85
NFKB1P19838 AL021397.1-201ENST00000451806 248 ntBASIC3.48□□□□□ -1.85
NFKB1P19838 AC024614.2-201ENST00000577584 372 ntBASIC3.48□□□□□ -1.85
NFKB1P19838 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.48□□□□□ -1.85
NFKB1P19838 JPX_2.1-201ENST00000614161 69 ntBASIC3.48□□□□□ -1.85
NFKB1P19838 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.48□□□□□ -1.85
NFKB1P19838 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NFKB1P19838 AL161912.2-201ENST00000565707 3007 ntBASIC3.47□□□□□ -1.85
NFKB1P19838 RPS29P21-201ENST00000496272 170 ntBASIC3.47□□□□□ -1.85
NFKB1P19838 RNA5SP236-201ENST00000516169 116 ntBASIC3.47□□□□□ -1.85
NFKB1P19838 IGKV1-22-201ENST00000524313 326 ntBASIC3.47□□□□□ -1.85
NFKB1P19838 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.47□□□□□ -1.85
NFKB1P19838 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.47□□□□□ -1.85
NFKB1P19838 U6.73-201ENST00000619194 103 ntBASIC3.47□□□□□ -1.85
NFKB1P19838 AC002064.3-201ENST00000623448 346 ntBASIC3.47□□□□□ -1.85
NFKB1P19838 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.47□□□□□ -1.85
NFKB1P19838 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.47□□□□□ -1.85
NFKB1P19838 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.47□□□□□ -1.85
NFKB1P19838 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NFKB1P19838 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
NFKB1P19838 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
NFKB1P19838 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
NFKB1P19838 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.46□□□□□ -1.86
NFKB1P19838 MIR218-2-201ENST00000385006 110 ntBASIC3.46□□□□□ -1.86
NFKB1P19838 RPS29P4-201ENST00000414733 161 ntBASIC3.46□□□□□ -1.86
NFKB1P19838 AC018634.1-201ENST00000437554 401 ntBASIC3.46□□□□□ -1.86
NFKB1P19838 HMGN2P18-201ENST00000450680 270 ntBASIC3.46□□□□□ -1.86
NFKB1P19838 AC006539.3-201ENST00000454258 129 ntBASIC3.46□□□□□ -1.86
NFKB1P19838 RPL23AP67-201ENST00000465341 474 ntBASIC3.46□□□□□ -1.86
NFKB1P19838 AC110768.1-201ENST00000509222 400 ntBASIC3.46□□□□□ -1.86
NFKB1P19838 MRPS36P2-201ENST00000512569 299 ntBASIC3.46□□□□□ -1.86
NFKB1P19838 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.46□□□□□ -1.86
NFKB1P19838 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.46□□□□□ -1.86
NFKB1P19838 MIR1248-201ENST00000629190 106 ntBASIC3.46□□□□□ -1.86
NFKB1P19838 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NFKB1P19838 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
NFKB1P19838 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
NFKB1P19838 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NFKB1P19838 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
NFKB1P19838 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.46□□□□□ -1.86
NFKB1P19838 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.46□□□□□ -1.86
NFKB1P19838 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
NFKB1P19838 AL049781.1-201ENST00000623195 3585 ntBASIC3.45□□□□□ -1.86
NFKB1P19838 Y_RNA.281-201ENST00000364774 94 ntBASIC3.45□□□□□ -1.86
NFKB1P19838 Y_RNA.369-201ENST00000365568 117 ntBASIC3.45□□□□□ -1.86
NFKB1P19838 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
NFKB1P19838 AC025750.2-201ENST00000442609 450 ntBASIC3.45□□□□□ -1.86
NFKB1P19838 AC093663.1-201ENST00000497190 394 ntBASIC3.45□□□□□ -1.86
NFKB1P19838 Y_RNA.677-201ENST00000516401 85 ntBASIC3.45□□□□□ -1.86
NFKB1P19838 RNU6-412P-201ENST00000516434 106 ntBASIC3.45□□□□□ -1.86
NFKB1P19838 RNU6-504P-201ENST00000516568 104 ntBASIC3.45□□□□□ -1.86
NFKB1P19838 SNORA67.7-201ENST00000516664 135 ntBASIC3.45□□□□□ -1.86
NFKB1P19838 RNU6-965P-201ENST00000516721 96 ntBASIC3.45□□□□□ -1.86
NFKB1P19838 RNU6-1096P-201ENST00000517089 102 ntBASIC3.45□□□□□ -1.86
NFKB1P19838 RNA5SP490-201ENST00000517141 136 ntBASIC3.45□□□□□ -1.86
NFKB1P19838 IGKV2-26-201ENST00000518305 343 ntBASIC3.45□□□□□ -1.86
NFKB1P19838 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.45□□□□□ -1.86
NFKB1P19838 MIR3129-201ENST00000581095 76 ntBASIC3.45□□□□□ -1.86
NFKB1P19838 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.45□□□□□ -1.86
NFKB1P19838 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NFKB1P19838 AC091564.4-201ENST00000533934 2194 ntBASIC3.45□□□□□ -1.86
NFKB1P19838 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 211.3 ms