Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DOBP13765 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DOBP13765 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
HLA-DOBP13765 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DOBP13765 MIR340-201ENST00000362125 95 ntBASIC1.94□□□□□ -2.1
HLA-DOBP13765 SNORA67.1-201ENST00000364749 141 ntBASIC1.94□□□□□ -2.1
HLA-DOBP13765 RNU6-160P-201ENST00000384591 107 ntBASIC1.94□□□□□ -2.1
HLA-DOBP13765 SNORA53-201ENST00000391141 249 ntBASIC1.94□□□□□ -2.1
HLA-DOBP13765 AC007064.1-201ENST00000412238 351 ntBASIC1.94□□□□□ -2.1
HLA-DOBP13765 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DOBP13765 POLR2KP2-201ENST00000438155 177 ntBASIC1.94□□□□□ -2.1
HLA-DOBP13765 RNU1-131P-201ENST00000458943 161 ntBASIC1.94□□□□□ -2.1
HLA-DOBP13765 RNU6-1338P-201ENST00000516328 91 ntBASIC1.94□□□□□ -2.1
HLA-DOBP13765 RNA5SP137-201ENST00000516833 135 ntBASIC1.94□□□□□ -2.1
HLA-DOBP13765 RNU1-104P-201ENST00000517280 175 ntBASIC1.94□□□□□ -2.1
HLA-DOBP13765 AC025647.1-201ENST00000517879 253 ntBASIC1.94□□□□□ -2.1
HLA-DOBP13765 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DOBP13765 AC005828.6-201ENST00000606610 232 ntBASIC1.94□□□□□ -2.1
HLA-DOBP13765 AC037487.3-201ENST00000606668 112 ntBASIC1.94□□□□□ -2.1
HLA-DOBP13765 AC062037.2-201ENST00000610137 73 ntBASIC1.94□□□□□ -2.1
HLA-DOBP13765 AP001282.2-201ENST00000616149 309 ntBASIC1.94□□□□□ -2.1
HLA-DOBP13765 U6.115-201ENST00000636045 103 ntBASIC1.94□□□□□ -2.1
HLA-DOBP13765 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
HLA-DOBP13765 AC010615.1-201ENST00000594254 1764 ntBASIC1.94□□□□□ -2.1
HLA-DOBP13765 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
HLA-DOBP13765 SNORD114-7-201ENST00000362520 77 ntBASIC1.93□□□□□ -2.1
HLA-DOBP13765 SNORD115-30-201ENST00000364117 82 ntBASIC1.93□□□□□ -2.1
HLA-DOBP13765 RNU6-326P-201ENST00000365480 107 ntBASIC1.93□□□□□ -2.1
HLA-DOBP13765 Y_RNA.569-201ENST00000384749 103 ntBASIC1.93□□□□□ -2.1
HLA-DOBP13765 MIR29C-201ENST00000385231 88 ntBASIC1.93□□□□□ -2.1
HLA-DOBP13765 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.93□□□□□ -2.1
HLA-DOBP13765 U3.40-201ENST00000408706 208 ntBASIC1.93□□□□□ -2.1
HLA-DOBP13765 Y_RNA.618-201ENST00000410949 107 ntBASIC1.93□□□□□ -2.1
HLA-DOBP13765 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DOBP13765 SNORD127-201ENST00000458892 86 ntBASIC1.93□□□□□ -2.1
HLA-DOBP13765 AC008413.1-201ENST00000511864 177 ntBASIC1.93□□□□□ -2.1
HLA-DOBP13765 RNA5SP200-201ENST00000516360 103 ntBASIC1.93□□□□□ -2.1
HLA-DOBP13765 RNU6-966P-201ENST00000516479 104 ntBASIC1.93□□□□□ -2.1
HLA-DOBP13765 RNU2-31P-201ENST00000516954 155 ntBASIC1.93□□□□□ -2.1
HLA-DOBP13765 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DOBP13765 AC023157.2-201ENST00000540596 141 ntBASIC1.93□□□□□ -2.1
HLA-DOBP13765 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DOBP13765 MIR5002-201ENST00000584713 97 ntBASIC1.93□□□□□ -2.1
HLA-DOBP13765 SDR42E1P4-201ENST00000620894 481 ntBASIC1.93□□□□□ -2.1
HLA-DOBP13765 AC006435.5-201ENST00000624486 112 ntBASIC1.93□□□□□ -2.1
HLA-DOBP13765 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DOBP13765 AL391987.6-201ENST00000305671 199 ntBASIC1.92□□□□□ -2.1
HLA-DOBP13765 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
HLA-DOBP13765 Y_RNA.136-201ENST00000363444 102 ntBASIC1.92□□□□□ -2.1
HLA-DOBP13765 RNU6-1240P-201ENST00000365155 104 ntBASIC1.92□□□□□ -2.1
HLA-DOBP13765 Y_RNA.361-201ENST00000365515 120 ntBASIC1.92□□□□□ -2.1
HLA-DOBP13765 Y_RNA.383-201ENST00000383855 97 ntBASIC1.92□□□□□ -2.1
HLA-DOBP13765 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
HLA-DOBP13765 AL031003.1-201ENST00000404229 172 ntBASIC1.92□□□□□ -2.1
HLA-DOBP13765 RPL23AP3-201ENST00000453844 468 ntBASIC1.92□□□□□ -2.1
HLA-DOBP13765 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DOBP13765 AC010598.1-201ENST00000510378 103 ntBASIC1.92□□□□□ -2.1
HLA-DOBP13765 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DOBP13765 SCARNA16.3-201ENST00000516595 184 ntBASIC1.92□□□□□ -2.1
HLA-DOBP13765 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DOBP13765 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.92□□□□□ -2.1
HLA-DOBP13765 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DOBP13765 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DOBP13765 AL159152.1-201ENST00000635019 2587 ntBASIC1.92□□□□□ -2.1
HLA-DOBP13765 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
HLA-DOBP13765 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HLA-DOBP13765 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.91□□□□□ -2.1
HLA-DOBP13765 Y_RNA.16-201ENST00000362421 102 ntBASIC1.91□□□□□ -2.1
HLA-DOBP13765 RNU6-271P-201ENST00000363858 105 ntBASIC1.91□□□□□ -2.1
HLA-DOBP13765 RNU6-324P-201ENST00000363957 106 ntBASIC1.91□□□□□ -2.1
HLA-DOBP13765 Y_RNA.237-201ENST00000364439 102 ntBASIC1.91□□□□□ -2.1
HLA-DOBP13765 RNU6-505P-201ENST00000384427 107 ntBASIC1.91□□□□□ -2.1
HLA-DOBP13765 SNORA40.19-201ENST00000390846 128 ntBASIC1.91□□□□□ -2.1
HLA-DOBP13765 AC016909.1-201ENST00000415916 166 ntBASIC1.91□□□□□ -2.1
HLA-DOBP13765 AC024067.1-201ENST00000426199 223 ntBASIC1.91□□□□□ -2.1
HLA-DOBP13765 AL353689.1-201ENST00000438895 199 ntBASIC1.91□□□□□ -2.1
HLA-DOBP13765 SNORD65B-201ENST00000459126 73 ntBASIC1.91□□□□□ -2.1
HLA-DOBP13765 RNU6-1132P-201ENST00000459214 107 ntBASIC1.91□□□□□ -2.1
HLA-DOBP13765 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HLA-DOBP13765 SERF1AP1-201ENST00000514575 187 ntBASIC1.91□□□□□ -2.1
HLA-DOBP13765 SNORA70.12-201ENST00000516084 153 ntBASIC1.91□□□□□ -2.1
HLA-DOBP13765 RNU6-436P-201ENST00000516171 114 ntBASIC1.91□□□□□ -2.1
HLA-DOBP13765 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DOBP13765 DEFB108E-201ENST00000524692 240 ntBASIC1.91□□□□□ -2.1
HLA-DOBP13765 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DOBP13765 SNORD53-201ENST00000579969 78 ntBASIC1.91□□□□□ -2.1
HLA-DOBP13765 AL031274.2-201ENST00000599419 203 ntBASIC1.91□□□□□ -2.1
HLA-DOBP13765 MIR6132-201ENST00000622083 109 ntBASIC1.91□□□□□ -2.1
HLA-DOBP13765 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
HLA-DOBP13765 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HLA-DOBP13765 AP006437.1-201ENST00000641440 3685 ntBASIC1.9□□□□□ -2.1
HLA-DOBP13765 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
HLA-DOBP13765 Y_RNA.14-201ENST00000362415 103 ntBASIC1.9□□□□□ -2.11
HLA-DOBP13765 Y_RNA.350-201ENST00000365409 98 ntBASIC1.9□□□□□ -2.11
HLA-DOBP13765 RNU6-514P-201ENST00000384208 107 ntBASIC1.9□□□□□ -2.11
HLA-DOBP13765 Y_RNA.500-201ENST00000384466 111 ntBASIC1.9□□□□□ -2.11
HLA-DOBP13765 Y_RNA.562-201ENST00000384695 113 ntBASIC1.9□□□□□ -2.11
HLA-DOBP13765 MT-TG-201ENST00000387429 68 ntBASIC1.9□□□□□ -2.11
HLA-DOBP13765 SNORA48.3-201ENST00000391081 134 ntBASIC1.9□□□□□ -2.11
HLA-DOBP13765 RNU6-1248P-201ENST00000391096 64 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 216.9 ms