Protein–RNA interactions for Protein: O75888

TNFSF13, Tumor necrosis factor ligand superfamily member 13, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13O75888 AC095038.3-201ENST00000634439 195 ntBASIC1.16□□□□□ -2.22
TNFSF13O75888 AC099654.5-201ENST00000636479 350 ntBASIC1.16□□□□□ -2.22
TNFSF13O75888 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TNFSF13O75888 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
TNFSF13O75888 RNU6-727P-201ENST00000363592 107 ntBASIC1.15□□□□□ -2.23
TNFSF13O75888 Y_RNA.226-201ENST00000364337 114 ntBASIC1.15□□□□□ -2.23
TNFSF13O75888 SNORD81.2-201ENST00000365153 76 ntBASIC1.15□□□□□ -2.23
TNFSF13O75888 Y_RNA.474-201ENST00000384341 102 ntBASIC1.15□□□□□ -2.23
TNFSF13O75888 MIR1267-201ENST00000408723 78 ntBASIC1.15□□□□□ -2.23
TNFSF13O75888 ELOCP21-201ENST00000412558 336 ntBASIC1.15□□□□□ -2.23
TNFSF13O75888 AC073910.1-201ENST00000445047 438 ntBASIC1.15□□□□□ -2.23
TNFSF13O75888 snoU13.27-201ENST00000459278 104 ntBASIC1.15□□□□□ -2.23
TNFSF13O75888 RPL7P42-201ENST00000481005 679 ntBASIC1.15□□□□□ -2.23
TNFSF13O75888 AL163195.1-201ENST00000496941 348 ntBASIC1.15□□□□□ -2.23
TNFSF13O75888 AC103851.1-201ENST00000506833 274 ntBASIC1.15□□□□□ -2.23
TNFSF13O75888 SNORA20.3-201ENST00000516880 132 ntBASIC1.15□□□□□ -2.23
TNFSF13O75888 AC091144.1-201ENST00000519573 138 ntBASIC1.15□□□□□ -2.23
TNFSF13O75888 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.15□□□□□ -2.23
TNFSF13O75888 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.15□□□□□ -2.23
TNFSF13O75888 AC093023.1-201ENST00000547375 507 ntBASIC1.15□□□□□ -2.23
TNFSF13O75888 AC004584.2-201ENST00000570407 410 ntBASIC1.15□□□□□ -2.23
TNFSF13O75888 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.15□□□□□ -2.23
TNFSF13O75888 AL359075.3-201ENST00000613288 217 ntBASIC1.15□□□□□ -2.23
TNFSF13O75888 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.15□□□□□ -2.23
TNFSF13O75888 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.15□□□□□ -2.23
TNFSF13O75888 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.14□□□□□ -2.23
TNFSF13O75888 Y_RNA.2-201ENST00000362330 96 ntBASIC1.14□□□□□ -2.23
TNFSF13O75888 RNU6-271P-201ENST00000363858 105 ntBASIC1.14□□□□□ -2.23
TNFSF13O75888 SNORA4.2-201ENST00000365313 147 ntBASIC1.14□□□□□ -2.23
TNFSF13O75888 RNU6-53P-201ENST00000365367 106 ntBASIC1.14□□□□□ -2.23
TNFSF13O75888 Y_RNA.557-201ENST00000384680 107 ntBASIC1.14□□□□□ -2.23
TNFSF13O75888 RNU6-700P-201ENST00000391043 107 ntBASIC1.14□□□□□ -2.23
TNFSF13O75888 SNORA75.4-201ENST00000391278 119 ntBASIC1.14□□□□□ -2.23
TNFSF13O75888 MIR1253-201ENST00000408273 105 ntBASIC1.14□□□□□ -2.23
TNFSF13O75888 RNU4-14P-201ENST00000410858 122 ntBASIC1.14□□□□□ -2.23
TNFSF13O75888 RNU6-1001P-201ENST00000411265 100 ntBASIC1.14□□□□□ -2.23
TNFSF13O75888 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.14□□□□□ -2.23
TNFSF13O75888 AC027119.1-201ENST00000440877 241 ntBASIC1.14□□□□□ -2.23
TNFSF13O75888 AL606517.2-201ENST00000442855 241 ntBASIC1.14□□□□□ -2.23
TNFSF13O75888 RPS29P29-201ENST00000456396 171 ntBASIC1.14□□□□□ -2.23
TNFSF13O75888 SNORD65B-201ENST00000459126 73 ntBASIC1.14□□□□□ -2.23
TNFSF13O75888 AC099513.1-201ENST00000490423 301 ntBASIC1.14□□□□□ -2.23
TNFSF13O75888 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.14□□□□□ -2.23
TNFSF13O75888 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.14□□□□□ -2.23
TNFSF13O75888 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.14□□□□□ -2.23
TNFSF13O75888 AC074133.1-201ENST00000515696 183 ntBASIC1.14□□□□□ -2.23
TNFSF13O75888 RNU7-99P-201ENST00000516271 62 ntBASIC1.14□□□□□ -2.23
TNFSF13O75888 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.14□□□□□ -2.23
TNFSF13O75888 AL390123.1-201ENST00000603216 237 ntBASIC1.14□□□□□ -2.23
TNFSF13O75888 AC022217.4-201ENST00000604389 163 ntBASIC1.14□□□□□ -2.23
TNFSF13O75888 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.14□□□□□ -2.23
TNFSF13O75888 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
TNFSF13O75888 SNORD1A-201ENST00000364968 72 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 RNU6-1283P-201ENST00000365314 105 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 RNU6-1264P-201ENST00000383891 107 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 RNU6-318P-201ENST00000384283 103 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 RNU6-331P-201ENST00000384724 107 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 MIR758-201ENST00000390227 88 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 RPL21P1-201ENST00000399532 476 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 RNU2-7P-201ENST00000410794 178 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 AC138393.2-201ENST00000414742 246 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 U8.22-201ENST00000459141 133 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 RPS26P55-201ENST00000471178 356 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 RPL17P19-201ENST00000489069 552 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 HMGN1P12-201ENST00000499125 195 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 RNA5SP445-201ENST00000515889 115 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 SNORA31.10-201ENST00000516482 106 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 RN7SKP49-201ENST00000516675 260 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 AL137100.2-201ENST00000555786 315 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.13□□□□□ -2.23
TNFSF13O75888 MIR3684-201ENST00000579779 74 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 AC005828.6-201ENST00000606610 232 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 MIR6078-201ENST00000611069 100 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 AL357075.2-201ENST00000614906 189 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 AC099654.14-201ENST00000638599 341 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
TNFSF13O75888 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.13□□□□□ -2.23
TNFSF13O75888 RNU6-1188P-201ENST00000363795 107 ntBASIC1.12□□□□□ -2.23
TNFSF13O75888 UBE2V1P7-201ENST00000446395 340 ntBASIC1.12□□□□□ -2.23
TNFSF13O75888 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.12□□□□□ -2.23
TNFSF13O75888 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.12□□□□□ -2.23
TNFSF13O75888 RPL31P58-201ENST00000469001 379 ntBASIC1.12□□□□□ -2.23
TNFSF13O75888 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.12□□□□□ -2.23
TNFSF13O75888 HMGN1P7-201ENST00000491722 313 ntBASIC1.12□□□□□ -2.23
TNFSF13O75888 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.12□□□□□ -2.23
TNFSF13O75888 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.12□□□□□ -2.23
TNFSF13O75888 AC010598.1-201ENST00000510378 103 ntBASIC1.12□□□□□ -2.23
TNFSF13O75888 SCARNA16.2-201ENST00000516520 172 ntBASIC1.12□□□□□ -2.23
TNFSF13O75888 RNU1-142P-201ENST00000516682 145 ntBASIC1.12□□□□□ -2.23
TNFSF13O75888 RNU6-307P-201ENST00000516743 106 ntBASIC1.12□□□□□ -2.23
TNFSF13O75888 RNU6-902P-201ENST00000517212 91 ntBASIC1.12□□□□□ -2.23
TNFSF13O75888 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.12□□□□□ -2.23
TNFSF13O75888 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.12□□□□□ -2.23
TNFSF13O75888 AL442163.3-201ENST00000554110 156 ntBASIC1.12□□□□□ -2.23
TNFSF13O75888 AC080078.3-201ENST00000605407 463 ntBASIC1.12□□□□□ -2.23
TNFSF13O75888 AC092794.2-201ENST00000620933 563 ntBASIC1.12□□□□□ -2.23
TNFSF13O75888 AL669831.3-213ENST00000636676 183 ntBASIC1.12□□□□□ -2.23
TNFSF13O75888 TPTEP1-208ENST00000636884 213 ntBASIC1.12□□□□□ -2.23
TNFSF13O75888 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
TNFSF13O75888 AC100821.1-201ENST00000523153 2479 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 1251 ms