Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC022432.1-201ENST00000595739 310 ntBASIC1.79□□□□□ -2.12
TO15178 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.79□□□□□ -2.12
TO15178 SNORD58B-201ENST00000607313 66 ntBASIC1.79□□□□□ -2.12
TO15178 AC007485.1-201ENST00000616755 206 ntBASIC1.79□□□□□ -2.12
TO15178 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.79□□□□□ -2.12
TO15178 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.79□□□□□ -2.12
TO15178 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
TO15178 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
TO15178 RNU6-1019P-201ENST00000364424 107 ntBASIC1.78□□□□□ -2.12
TO15178 Y_RNA.287-201ENST00000364853 94 ntBASIC1.78□□□□□ -2.12
TO15178 SNORA72.2-201ENST00000365028 127 ntBASIC1.78□□□□□ -2.12
TO15178 RNU6-708P-201ENST00000384217 107 ntBASIC1.78□□□□□ -2.12
TO15178 RNU6-474P-201ENST00000384243 107 ntBASIC1.78□□□□□ -2.12
TO15178 AC019129.1-201ENST00000403786 261 ntBASIC1.78□□□□□ -2.12
TO15178 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.78□□□□□ -2.12
TO15178 HSPE1P21-201ENST00000438283 308 ntBASIC1.78□□□□□ -2.12
TO15178 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.78□□□□□ -2.12
TO15178 UBL5P3-201ENST00000475112 231 ntBASIC1.78□□□□□ -2.12
TO15178 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.78□□□□□ -2.12
TO15178 AC010598.1-201ENST00000510378 103 ntBASIC1.78□□□□□ -2.12
TO15178 RNA5SP182-201ENST00000516064 82 ntBASIC1.78□□□□□ -2.12
TO15178 RNU6-988P-201ENST00000519081 107 ntBASIC1.78□□□□□ -2.12
TO15178 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.78□□□□□ -2.12
TO15178 AL137100.2-201ENST00000555786 315 ntBASIC1.78□□□□□ -2.12
TO15178 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.78□□□□□ -2.12
TO15178 AC006435.5-201ENST00000624486 112 ntBASIC1.78□□□□□ -2.12
TO15178 U6.92-201ENST00000636464 89 ntBASIC1.78□□□□□ -2.12
TO15178 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
TO15178 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
TO15178 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
TO15178 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TO15178 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
TO15178 Y_RNA.28-201ENST00000362554 111 ntBASIC1.77□□□□□ -2.13
TO15178 Y_RNA.31-201ENST00000362574 102 ntBASIC1.77□□□□□ -2.13
TO15178 Y_RNA.80-201ENST00000362996 102 ntBASIC1.77□□□□□ -2.13
TO15178 Y_RNA.394-201ENST00000383942 103 ntBASIC1.77□□□□□ -2.13
TO15178 Y_RNA.485-201ENST00000384395 102 ntBASIC1.77□□□□□ -2.13
TO15178 RNU6-308P-201ENST00000390957 107 ntBASIC1.77□□□□□ -2.13
TO15178 MIR1302-11-201ENST00000408051 138 ntBASIC1.77□□□□□ -2.13
TO15178 MIR1302-9-201ENST00000408365 138 ntBASIC1.77□□□□□ -2.13
TO15178 MIR1302-10-201ENST00000408734 138 ntBASIC1.77□□□□□ -2.13
TO15178 RNA5SP100-201ENST00000410903 110 ntBASIC1.77□□□□□ -2.13
TO15178 RNA5SP59-201ENST00000410922 110 ntBASIC1.77□□□□□ -2.13
TO15178 PMCHL1-202ENST00000423102 261 ntBASIC1.77□□□□□ -2.13
TO15178 SNORD65B-201ENST00000459126 73 ntBASIC1.77□□□□□ -2.13
TO15178 RPL26P26-201ENST00000480251 434 ntBASIC1.77□□□□□ -2.13
TO15178 AC010469.2-201ENST00000496412 480 ntBASIC1.77□□□□□ -2.13
TO15178 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.77□□□□□ -2.13
TO15178 SNORA44.1-201ENST00000517031 108 ntBASIC1.77□□□□□ -2.13
TO15178 MIR3122-201ENST00000577243 73 ntBASIC1.77□□□□□ -2.13
TO15178 MIR1302-2-201ENST00000607096 138 ntBASIC1.77□□□□□ -2.13
TO15178 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.77□□□□□ -2.13
TO15178 AC240442.1-201ENST00000616055 283 ntBASIC1.77□□□□□ -2.13
TO15178 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.77□□□□□ -2.13
TO15178 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.77□□□□□ -2.13
TO15178 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.77□□□□□ -2.13
TO15178 AC005592.1-201ENST00000566527 1640 ntBASIC1.77□□□□□ -2.13
TO15178 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
TO15178 RNU6-961P-201ENST00000363893 105 ntBASIC1.76□□□□□ -2.13
TO15178 SNORD14.1-201ENST00000365609 90 ntBASIC1.76□□□□□ -2.13
TO15178 Y_RNA.424-201ENST00000384063 103 ntBASIC1.76□□□□□ -2.13
TO15178 RNA5SP323-201ENST00000391094 133 ntBASIC1.76□□□□□ -2.13
TO15178 MIR548P-201ENST00000408336 84 ntBASIC1.76□□□□□ -2.13
TO15178 AC009310.1-201ENST00000414414 451 ntBASIC1.76□□□□□ -2.13
TO15178 AC069257.2-201ENST00000441819 155 ntBASIC1.76□□□□□ -2.13
TO15178 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.76□□□□□ -2.13
TO15178 AC112492.4-201ENST00000456549 352 ntBASIC1.76□□□□□ -2.13
TO15178 AC107393.1-201ENST00000512403 346 ntBASIC1.76□□□□□ -2.13
TO15178 Y_RNA.701-201ENST00000516812 110 ntBASIC1.76□□□□□ -2.13
TO15178 AC024995.1-201ENST00000523014 93 ntBASIC1.76□□□□□ -2.13
TO15178 AC084364.2-201ENST00000546924 395 ntBASIC1.76□□□□□ -2.13
TO15178 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.76□□□□□ -2.13
TO15178 AL121655.1-201ENST00000605811 308 ntBASIC1.76□□□□□ -2.13
TO15178 Y_RNA.772-201ENST00000606692 102 ntBASIC1.76□□□□□ -2.13
TO15178 AC116312.1-201ENST00000606841 314 ntBASIC1.76□□□□□ -2.13
TO15178 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.76□□□□□ -2.13
TO15178 AC011476.5-201ENST00000615594 130 ntBASIC1.76□□□□□ -2.13
TO15178 AC004467.1-201ENST00000615678 330 ntBASIC1.76□□□□□ -2.13
TO15178 AC010205.1-201ENST00000616668 449 ntBASIC1.76□□□□□ -2.13
TO15178 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.76□□□□□ -2.13
TO15178 AC010615.1-201ENST00000594254 1764 ntBASIC1.75□□□□□ -2.13
TO15178 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
TO15178 RNU6-626P-201ENST00000363354 107 ntBASIC1.75□□□□□ -2.13
TO15178 RNU4-50P-201ENST00000364361 141 ntBASIC1.75□□□□□ -2.13
TO15178 EBAG9P1-201ENST00000418955 543 ntBASIC1.75□□□□□ -2.13
TO15178 SUMO1P2-201ENST00000452524 304 ntBASIC1.75□□□□□ -2.13
TO15178 snoU13.15-201ENST00000459407 104 ntBASIC1.75□□□□□ -2.13
TO15178 AC008834.1-201ENST00000511612 175 ntBASIC1.75□□□□□ -2.13
TO15178 RNU1-142P-201ENST00000516682 145 ntBASIC1.75□□□□□ -2.13
TO15178 Y_RNA.713-201ENST00000517013 96 ntBASIC1.75□□□□□ -2.13
TO15178 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.75□□□□□ -2.13
TO15178 AP002001.1-203ENST00000534002 267 ntBASIC1.75□□□□□ -2.13
TO15178 AC022254.1-201ENST00000567857 235 ntBASIC1.75□□□□□ -2.13
TO15178 AC005176.2-201ENST00000596933 147 ntBASIC1.75□□□□□ -2.13
TO15178 AL390123.1-201ENST00000603216 237 ntBASIC1.75□□□□□ -2.13
TO15178 AC010900.2-201ENST00000604508 210 ntBASIC1.75□□□□□ -2.13
TO15178 AL359075.3-201ENST00000613288 217 ntBASIC1.75□□□□□ -2.13
TO15178 AC091812.1-201ENST00000432235 1948 ntBASIC1.75□□□□□ -2.13
TO15178 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TO15178 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms