Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 Y_RNA.590-201ENST00000410140 107 ntBASIC2.69□□□□□ -1.98
PNKPQ96T60 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
PNKPQ96T60 RNU7-14P-201ENST00000459331 62 ntBASIC2.69□□□□□ -1.98
PNKPQ96T60 TRBV12-1-201ENST00000479785 344 ntBASIC2.69□□□□□ -1.98
PNKPQ96T60 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.69□□□□□ -1.98
PNKPQ96T60 RNU6-436P-201ENST00000516171 114 ntBASIC2.69□□□□□ -1.98
PNKPQ96T60 RNU6-191P-201ENST00000516295 94 ntBASIC2.69□□□□□ -1.98
PNKPQ96T60 AC105245.1-201ENST00000581934 244 ntBASIC2.69□□□□□ -1.98
PNKPQ96T60 MIR5092-201ENST00000583139 88 ntBASIC2.69□□□□□ -1.98
PNKPQ96T60 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.69□□□□□ -1.98
PNKPQ96T60 RPL17P51-201ENST00000605218 238 ntBASIC2.69□□□□□ -1.98
PNKPQ96T60 AC005828.6-201ENST00000606610 232 ntBASIC2.69□□□□□ -1.98
PNKPQ96T60 AC008873.1-201ENST00000625051 138 ntBASIC2.69□□□□□ -1.98
PNKPQ96T60 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.69□□□□□ -1.98
PNKPQ96T60 MIR7157-201ENST00000635801 60 ntBASIC2.69□□□□□ -1.98
PNKPQ96T60 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
PNKPQ96T60 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
PNKPQ96T60 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.68□□□□□ -1.98
PNKPQ96T60 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.68□□□□□ -1.98
PNKPQ96T60 Y_RNA.83-201ENST00000363005 113 ntBASIC2.68□□□□□ -1.98
PNKPQ96T60 U3.8-201ENST00000363675 217 ntBASIC2.68□□□□□ -1.98
PNKPQ96T60 Y_RNA.292-201ENST00000364904 97 ntBASIC2.68□□□□□ -1.98
PNKPQ96T60 U3.40-201ENST00000408706 208 ntBASIC2.68□□□□□ -1.98
PNKPQ96T60 RNU2-61P-201ENST00000411069 191 ntBASIC2.68□□□□□ -1.98
PNKPQ96T60 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.68□□□□□ -1.98
PNKPQ96T60 PIGPP3-201ENST00000425307 415 ntBASIC2.68□□□□□ -1.98
PNKPQ96T60 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.68□□□□□ -1.98
PNKPQ96T60 PRELID3BP1-201ENST00000457142 540 ntBASIC2.68□□□□□ -1.98
PNKPQ96T60 HMGN2P9-201ENST00000476875 229 ntBASIC2.68□□□□□ -1.98
PNKPQ96T60 ATP5EP1-201ENST00000510257 156 ntBASIC2.68□□□□□ -1.98
PNKPQ96T60 Y_RNA.679-201ENST00000516416 91 ntBASIC2.68□□□□□ -1.98
PNKPQ96T60 RNU6-965P-201ENST00000516721 96 ntBASIC2.68□□□□□ -1.98
PNKPQ96T60 AC069294.1-201ENST00000608397 350 ntBASIC2.68□□□□□ -1.98
PNKPQ96T60 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.68□□□□□ -1.98
PNKPQ96T60 AL590808.1-201ENST00000618696 141 ntBASIC2.68□□□□□ -1.98
PNKPQ96T60 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PNKPQ96T60 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
PNKPQ96T60 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
PNKPQ96T60 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
PNKPQ96T60 RNU6-234P-201ENST00000365229 104 ntBASIC2.67□□□□□ -1.98
PNKPQ96T60 RNY4P28-201ENST00000365281 93 ntBASIC2.67□□□□□ -1.98
PNKPQ96T60 RNU6-209P-201ENST00000384118 107 ntBASIC2.67□□□□□ -1.98
PNKPQ96T60 MIR586-201ENST00000385035 97 ntBASIC2.67□□□□□ -1.98
PNKPQ96T60 Y_RNA.626-201ENST00000411288 95 ntBASIC2.67□□□□□ -1.98
PNKPQ96T60 TOMM22P2-201ENST00000430735 237 ntBASIC2.67□□□□□ -1.98
PNKPQ96T60 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.67□□□□□ -1.98
PNKPQ96T60 AC008413.1-201ENST00000511864 177 ntBASIC2.67□□□□□ -1.98
PNKPQ96T60 RNU6-182P-201ENST00000516970 105 ntBASIC2.67□□□□□ -1.98
PNKPQ96T60 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.67□□□□□ -1.98
PNKPQ96T60 MIR4282-201ENST00000583613 67 ntBASIC2.67□□□□□ -1.98
PNKPQ96T60 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.67□□□□□ -1.98
PNKPQ96T60 AC011921.3-201ENST00000605540 361 ntBASIC2.67□□□□□ -1.98
PNKPQ96T60 AC004792.1-201ENST00000614523 137 ntBASIC2.67□□□□□ -1.98
PNKPQ96T60 FO624990.1-201ENST00000636373 85 ntBASIC2.67□□□□□ -1.98
PNKPQ96T60 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.67□□□□□ -1.98
PNKPQ96T60 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PNKPQ96T60 Y_RNA.29-201ENST00000362570 113 ntBASIC2.66□□□□□ -1.98
PNKPQ96T60 Y_RNA.82-201ENST00000363000 102 ntBASIC2.66□□□□□ -1.98
PNKPQ96T60 Y_RNA.92-201ENST00000363043 102 ntBASIC2.66□□□□□ -1.98
PNKPQ96T60 SNORD115-30-201ENST00000364117 82 ntBASIC2.66□□□□□ -1.98
PNKPQ96T60 Y_RNA.235-201ENST00000364412 102 ntBASIC2.66□□□□□ -1.98
PNKPQ96T60 Y_RNA.306-201ENST00000365015 102 ntBASIC2.66□□□□□ -1.98
PNKPQ96T60 Y_RNA.312-201ENST00000365089 102 ntBASIC2.66□□□□□ -1.98
PNKPQ96T60 Y_RNA.322-201ENST00000365151 102 ntBASIC2.66□□□□□ -1.98
PNKPQ96T60 SNORA67.4-201ENST00000384688 142 ntBASIC2.66□□□□□ -1.98
PNKPQ96T60 NDUFB4P10-201ENST00000452541 359 ntBASIC2.66□□□□□ -1.98
PNKPQ96T60 Y_RNA.650-201ENST00000459002 102 ntBASIC2.66□□□□□ -1.98
PNKPQ96T60 Y_RNA.700-201ENST00000516806 100 ntBASIC2.66□□□□□ -1.98
PNKPQ96T60 Y_RNA.777-201ENST00000516982 102 ntBASIC2.66□□□□□ -1.98
PNKPQ96T60 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.66□□□□□ -1.98
PNKPQ96T60 Y_RNA.771-201ENST00000598668 102 ntBASIC2.66□□□□□ -1.98
PNKPQ96T60 Y_RNA.789-201ENST00000622480 102 ntBASIC2.66□□□□□ -1.98
PNKPQ96T60 CTSLP2-204ENST00000629029 392 ntBASIC2.66□□□□□ -1.98
PNKPQ96T60 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
PNKPQ96T60 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
PNKPQ96T60 MIR411-201ENST00000362239 96 ntBASIC2.65□□□□□ -1.99
PNKPQ96T60 Y_RNA.217-201ENST00000364214 105 ntBASIC2.65□□□□□ -1.99
PNKPQ96T60 SNORA80E-201ENST00000384744 137 ntBASIC2.65□□□□□ -1.99
PNKPQ96T60 MIR27B-201ENST00000385129 97 ntBASIC2.65□□□□□ -1.99
PNKPQ96T60 FO393413.1-201ENST00000402892 195 ntBASIC2.65□□□□□ -1.99
PNKPQ96T60 MIR1283-1-201ENST00000408494 87 ntBASIC2.65□□□□□ -1.99
PNKPQ96T60 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.65□□□□□ -1.99
PNKPQ96T60 AL138752.1-201ENST00000452964 351 ntBASIC2.65□□□□□ -1.99
PNKPQ96T60 Y_RNA.638-201ENST00000459374 113 ntBASIC2.65□□□□□ -1.99
PNKPQ96T60 Y_RNA.641-201ENST00000459414 105 ntBASIC2.65□□□□□ -1.99
PNKPQ96T60 AC023141.11-201ENST00000508864 202 ntBASIC2.65□□□□□ -1.99
PNKPQ96T60 AC109329.2-201ENST00000519658 482 ntBASIC2.65□□□□□ -1.99
PNKPQ96T60 AC024405.2-202ENST00000532731 184 ntBASIC2.65□□□□□ -1.99
PNKPQ96T60 AL049779.4-201ENST00000604500 156 ntBASIC2.65□□□□□ -1.99
PNKPQ96T60 AC098479.1-201ENST00000609225 154 ntBASIC2.65□□□□□ -1.99
PNKPQ96T60 MIR1248-201ENST00000629190 106 ntBASIC2.65□□□□□ -1.99
PNKPQ96T60 snoU18.1-201ENST00000629629 71 ntBASIC2.65□□□□□ -1.99
PNKPQ96T60 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
PNKPQ96T60 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.64□□□□□ -1.99
PNKPQ96T60 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PNKPQ96T60 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
PNKPQ96T60 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
PNKPQ96T60 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
PNKPQ96T60 Y_RNA.243-201ENST00000364481 109 ntBASIC2.64□□□□□ -1.99
PNKPQ96T60 RNU1-51P-201ENST00000365345 176 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 226.9 ms