Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 Y_RNA.237-201ENST00000364439 102 ntBASIC2.49□□□□□ -2.01
NKX6-1P78426 AL031003.1-201ENST00000404229 172 ntBASIC2.49□□□□□ -2.01
NKX6-1P78426 RNU6-710P-201ENST00000410424 105 ntBASIC2.49□□□□□ -2.01
NKX6-1P78426 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.49□□□□□ -2.01
NKX6-1P78426 SNORD65B-201ENST00000459126 73 ntBASIC2.49□□□□□ -2.01
NKX6-1P78426 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.49□□□□□ -2.01
NKX6-1P78426 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.49□□□□□ -2.01
NKX6-1P78426 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.49□□□□□ -2.01
NKX6-1P78426 AP001282.2-201ENST00000616149 309 ntBASIC2.49□□□□□ -2.01
NKX6-1P78426 AC006435.5-201ENST00000624486 112 ntBASIC2.49□□□□□ -2.01
NKX6-1P78426 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NKX6-1P78426 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.48□□□□□ -2.01
NKX6-1P78426 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
NKX6-1P78426 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NKX6-1P78426 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
NKX6-1P78426 MIR340-201ENST00000362125 95 ntBASIC2.48□□□□□ -2.01
NKX6-1P78426 Y_RNA.16-201ENST00000362421 102 ntBASIC2.48□□□□□ -2.01
NKX6-1P78426 SNORD114-7-201ENST00000362520 77 ntBASIC2.48□□□□□ -2.01
NKX6-1P78426 Y_RNA.329-201ENST00000365209 107 ntBASIC2.48□□□□□ -2.01
NKX6-1P78426 RNU6-505P-201ENST00000384427 107 ntBASIC2.48□□□□□ -2.01
NKX6-1P78426 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.48□□□□□ -2.01
NKX6-1P78426 SNORD109B-201ENST00000458961 67 ntBASIC2.48□□□□□ -2.01
NKX6-1P78426 SNORD109A-201ENST00000459128 67 ntBASIC2.48□□□□□ -2.01
NKX6-1P78426 RPL39P38-201ENST00000467018 153 ntBASIC2.48□□□□□ -2.01
NKX6-1P78426 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.48□□□□□ -2.01
NKX6-1P78426 SERF1AP1-201ENST00000514575 187 ntBASIC2.48□□□□□ -2.01
NKX6-1P78426 RNU6-436P-201ENST00000516171 114 ntBASIC2.48□□□□□ -2.01
NKX6-1P78426 RNU6-966P-201ENST00000516479 104 ntBASIC2.48□□□□□ -2.01
NKX6-1P78426 SCARNA24.2-201ENST00000516968 130 ntBASIC2.48□□□□□ -2.01
NKX6-1P78426 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.48□□□□□ -2.01
NKX6-1P78426 AC023157.2-201ENST00000540596 141 ntBASIC2.48□□□□□ -2.01
NKX6-1P78426 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.48□□□□□ -2.01
NKX6-1P78426 AC006006.1-201ENST00000603082 144 ntBASIC2.48□□□□□ -2.01
NKX6-1P78426 AC022202.1-201ENST00000613515 211 ntBASIC2.48□□□□□ -2.01
NKX6-1P78426 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
NKX6-1P78426 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
NKX6-1P78426 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
NKX6-1P78426 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
NKX6-1P78426 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.47□□□□□ -2.01
NKX6-1P78426 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
NKX6-1P78426 Y_RNA.14-201ENST00000362415 103 ntBASIC2.47□□□□□ -2.01
NKX6-1P78426 Y_RNA.136-201ENST00000363444 102 ntBASIC2.47□□□□□ -2.01
NKX6-1P78426 SNORA20B-201ENST00000384220 132 ntBASIC2.47□□□□□ -2.01
NKX6-1P78426 Y_RNA.518-201ENST00000384552 113 ntBASIC2.47□□□□□ -2.01
NKX6-1P78426 MIR181B1-201ENST00000385240 110 ntBASIC2.47□□□□□ -2.01
NKX6-1P78426 RNU2-52P-201ENST00000410680 190 ntBASIC2.47□□□□□ -2.01
NKX6-1P78426 RNU2-38P-201ENST00000410856 79 ntBASIC2.47□□□□□ -2.01
NKX6-1P78426 AC010154.1-201ENST00000425857 269 ntBASIC2.47□□□□□ -2.01
NKX6-1P78426 MRPS10P1-201ENST00000448483 130 ntBASIC2.47□□□□□ -2.01
NKX6-1P78426 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.47□□□□□ -2.01
NKX6-1P78426 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.47□□□□□ -2.01
NKX6-1P78426 AC005828.6-201ENST00000606610 232 ntBASIC2.47□□□□□ -2.01
NKX6-1P78426 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
NKX6-1P78426 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
NKX6-1P78426 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
NKX6-1P78426 RNU6-23P-201ENST00000363283 107 ntBASIC2.46□□□□□ -2.02
NKX6-1P78426 Y_RNA.188-201ENST00000363952 111 ntBASIC2.46□□□□□ -2.02
NKX6-1P78426 SNORD114-6-201ENST00000364393 72 ntBASIC2.46□□□□□ -2.02
NKX6-1P78426 Y_RNA.350-201ENST00000365409 98 ntBASIC2.46□□□□□ -2.02
NKX6-1P78426 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
NKX6-1P78426 MIR873-201ENST00000401120 77 ntBASIC2.46□□□□□ -2.02
NKX6-1P78426 MIR548H3-201ENST00000408771 118 ntBASIC2.46□□□□□ -2.02
NKX6-1P78426 RNA5SP270-201ENST00000411361 118 ntBASIC2.46□□□□□ -2.02
NKX6-1P78426 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
NKX6-1P78426 AL353689.1-201ENST00000438895 199 ntBASIC2.46□□□□□ -2.02
NKX6-1P78426 AL139109.1-201ENST00000455491 297 ntBASIC2.46□□□□□ -2.02
NKX6-1P78426 UBL5P3-201ENST00000475112 231 ntBASIC2.46□□□□□ -2.02
NKX6-1P78426 RN7SL636P-201ENST00000497504 294 ntBASIC2.46□□□□□ -2.02
NKX6-1P78426 AC011406.1-201ENST00000512440 370 ntBASIC2.46□□□□□ -2.02
NKX6-1P78426 SUMO2P18-201ENST00000518873 252 ntBASIC2.46□□□□□ -2.02
NKX6-1P78426 AC004486.1-201ENST00000546846 233 ntBASIC2.46□□□□□ -2.02
NKX6-1P78426 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.46□□□□□ -2.02
NKX6-1P78426 AL512605.2-201ENST00000592972 256 ntBASIC2.46□□□□□ -2.02
NKX6-1P78426 DEFB117-201ENST00000602356 141 ntBASIC2.46□□□□□ -2.02
NKX6-1P78426 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
NKX6-1P78426 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
NKX6-1P78426 MAPK10-266ENST00000641066 6555 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
NKX6-1P78426 RNA5SP493-201ENST00000364115 91 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 RNU6-1164P-201ENST00000364428 107 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 RNU6-407P-201ENST00000365280 104 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 SNORA70B-201ENST00000384210 135 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 AC060773.1-201ENST00000421698 310 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 HMGN2P34-201ENST00000437647 269 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 ATP5J2P3-201ENST00000451550 258 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.45□□□□□ -2.02
NKX6-1P78426 AC008413.1-201ENST00000511864 177 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.45□□□□□ -2.02
NKX6-1P78426 AC027419.1-201ENST00000522976 328 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 AL137100.2-201ENST00000555786 315 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 U2.15-201ENST00000611544 191 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 U2.16-201ENST00000613119 191 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.45□□□□□ -2.02
NKX6-1P78426 U2.12-201ENST00000613778 191 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 U2.20-201ENST00000613956 192 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 U2.9-201ENST00000615427 191 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 U2.11-201ENST00000616345 191 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 U2.2-201ENST00000616535 191 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 U2.3-201ENST00000617785 191 ntBASIC2.45□□□□□ -2.02
NKX6-1P78426 U2.19-201ENST00000618602 191 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 206.2 ms