Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC023043.3-201ENST00000593113 385 ntBASIC3.18□□□□□ -1.9
EPHB3P54753 AL670379.2-201ENST00000604983 252 ntBASIC3.18□□□□□ -1.9
EPHB3P54753 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.18□□□□□ -1.9
EPHB3P54753 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.18□□□□□ -1.9
EPHB3P54753 AC103988.1-201ENST00000566382 2177 ntBASIC3.18□□□□□ -1.9
EPHB3P54753 MAPK10-362ENST00000641864 4484 ntBASIC3.18□□□□□ -1.9
EPHB3P54753 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.18□□□□□ -1.9
EPHB3P54753 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.17□□□□□ -1.9
EPHB3P54753 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
EPHB3P54753 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
EPHB3P54753 MIR367-201ENST00000362299 68 ntBASIC3.17□□□□□ -1.9
EPHB3P54753 SNORD114-7-201ENST00000362520 77 ntBASIC3.17□□□□□ -1.9
EPHB3P54753 RNY1P11-201ENST00000363759 113 ntBASIC3.17□□□□□ -1.9
EPHB3P54753 RNU6-198P-201ENST00000384258 104 ntBASIC3.17□□□□□ -1.9
EPHB3P54753 Y_RNA.500-201ENST00000384466 111 ntBASIC3.17□□□□□ -1.9
EPHB3P54753 RNU6-19P-201ENST00000384718 107 ntBASIC3.17□□□□□ -1.9
EPHB3P54753 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
EPHB3P54753 SNORA11.2-201ENST00000408318 127 ntBASIC3.17□□□□□ -1.9
EPHB3P54753 AC023141.4-201ENST00000412031 328 ntBASIC3.17□□□□□ -1.9
EPHB3P54753 RPL32P35-201ENST00000415214 394 ntBASIC3.17□□□□□ -1.9
EPHB3P54753 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.17□□□□□ -1.9
EPHB3P54753 snoU13.28-201ENST00000459235 104 ntBASIC3.17□□□□□ -1.9
EPHB3P54753 AC092185.1-201ENST00000491371 97 ntBASIC3.17□□□□□ -1.9
EPHB3P54753 RNA5SP217-201ENST00000515959 91 ntBASIC3.17□□□□□ -1.9
EPHB3P54753 RNU2-56P-201ENST00000516826 190 ntBASIC3.17□□□□□ -1.9
EPHB3P54753 Y_RNA.709-201ENST00000516952 92 ntBASIC3.17□□□□□ -1.9
EPHB3P54753 AC107016.2-201ENST00000547968 190 ntBASIC3.17□□□□□ -1.9
EPHB3P54753 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
EPHB3P54753 AL033523.1-201ENST00000605153 153 ntBASIC3.17□□□□□ -1.9
EPHB3P54753 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.17□□□□□ -1.9
EPHB3P54753 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.17□□□□□ -1.9
EPHB3P54753 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
EPHB3P54753 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.16□□□□□ -1.9
EPHB3P54753 RNU6-588P-201ENST00000410281 105 ntBASIC3.16□□□□□ -1.9
EPHB3P54753 AC245291.1-201ENST00000419501 328 ntBASIC3.16□□□□□ -1.9
EPHB3P54753 EEF1B2P7-201ENST00000451177 676 ntBASIC3.16□□□□□ -1.9
EPHB3P54753 RPS3P1-201ENST00000456781 192 ntBASIC3.16□□□□□ -1.9
EPHB3P54753 AC145146.1-201ENST00000496370 254 ntBASIC3.16□□□□□ -1.9
EPHB3P54753 SCGB1D5P-201ENST00000515134 247 ntBASIC3.16□□□□□ -1.9
EPHB3P54753 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.16□□□□□ -1.9
EPHB3P54753 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.16□□□□□ -1.9
EPHB3P54753 MIR6129-201ENST00000616087 109 ntBASIC3.16□□□□□ -1.9
EPHB3P54753 AL391516.1-201ENST00000554380 2449 ntBASIC3.16□□□□□ -1.9
EPHB3P54753 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
EPHB3P54753 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
EPHB3P54753 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
EPHB3P54753 AC091564.4-201ENST00000533934 2194 ntBASIC3.15□□□□□ -1.9
EPHB3P54753 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.15□□□□□ -1.9
EPHB3P54753 RNU6-915P-201ENST00000364943 103 ntBASIC3.15□□□□□ -1.91
EPHB3P54753 RNU6-597P-201ENST00000365620 102 ntBASIC3.15□□□□□ -1.91
EPHB3P54753 Y_RNA.521-201ENST00000384560 114 ntBASIC3.15□□□□□ -1.91
EPHB3P54753 RNU6-851P-201ENST00000384565 107 ntBASIC3.15□□□□□ -1.91
EPHB3P54753 Y_RNA.525-201ENST00000384570 113 ntBASIC3.15□□□□□ -1.91
EPHB3P54753 AL133475.1-201ENST00000404414 305 ntBASIC3.15□□□□□ -1.91
EPHB3P54753 AL158823.1-201ENST00000418441 478 ntBASIC3.15□□□□□ -1.91
EPHB3P54753 AL139281.1-201ENST00000422120 335 ntBASIC3.15□□□□□ -1.91
EPHB3P54753 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.15□□□□□ -1.91
EPHB3P54753 AC016925.1-201ENST00000458303 298 ntBASIC3.15□□□□□ -1.91
EPHB3P54753 SRIP1-201ENST00000489235 288 ntBASIC3.15□□□□□ -1.91
EPHB3P54753 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.15□□□□□ -1.91
EPHB3P54753 RNA5SP76-201ENST00000516277 87 ntBASIC3.15□□□□□ -1.91
EPHB3P54753 RNU2-44P-201ENST00000516795 194 ntBASIC3.15□□□□□ -1.91
EPHB3P54753 SNORA31.21-201ENST00000517180 77 ntBASIC3.15□□□□□ -1.91
EPHB3P54753 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.15□□□□□ -1.91
EPHB3P54753 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.15□□□□□ -1.91
EPHB3P54753 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
EPHB3P54753 SNORD114-19-201ENST00000363072 75 ntBASIC3.14□□□□□ -1.91
EPHB3P54753 MIR548B-201ENST00000385247 97 ntBASIC3.14□□□□□ -1.91
EPHB3P54753 SNORA48.8-201ENST00000391324 134 ntBASIC3.14□□□□□ -1.91
EPHB3P54753 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.14□□□□□ -1.91
EPHB3P54753 AL139132.1-201ENST00000431587 344 ntBASIC3.14□□□□□ -1.91
EPHB3P54753 RNU7-115P-201ENST00000516433 55 ntBASIC3.14□□□□□ -1.91
EPHB3P54753 RNU6-589P-201ENST00000516485 107 ntBASIC3.14□□□□□ -1.91
EPHB3P54753 RNA5SP367-201ENST00000516557 118 ntBASIC3.14□□□□□ -1.91
EPHB3P54753 SCARNA20.6-201ENST00000517251 106 ntBASIC3.14□□□□□ -1.91
EPHB3P54753 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.14□□□□□ -1.91
EPHB3P54753 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.14□□□□□ -1.91
EPHB3P54753 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.14□□□□□ -1.91
EPHB3P54753 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.14□□□□□ -1.91
EPHB3P54753 MIR548AY-201ENST00000617669 107 ntBASIC3.14□□□□□ -1.91
EPHB3P54753 MIR3914-2-201ENST00000637339 95 ntBASIC3.14□□□□□ -1.91
EPHB3P54753 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
EPHB3P54753 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
EPHB3P54753 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
EPHB3P54753 RNU6-1210P-201ENST00000363775 107 ntBASIC3.13□□□□□ -1.91
EPHB3P54753 U8.7-201ENST00000364940 136 ntBASIC3.13□□□□□ -1.91
EPHB3P54753 MIR1278-201ENST00000408753 81 ntBASIC3.13□□□□□ -1.91
EPHB3P54753 RNU6-383P-201ENST00000410864 94 ntBASIC3.13□□□□□ -1.91
EPHB3P54753 RPS12P18-201ENST00000442381 270 ntBASIC3.13□□□□□ -1.91
EPHB3P54753 AL441985.1-201ENST00000457727 251 ntBASIC3.13□□□□□ -1.91
EPHB3P54753 RNU7-23P-201ENST00000459465 62 ntBASIC3.13□□□□□ -1.91
EPHB3P54753 UBE2DNL-203ENST00000474922 222 ntBASIC3.13□□□□□ -1.91
EPHB3P54753 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.13□□□□□ -1.91
EPHB3P54753 RNA5SP170-201ENST00000517150 101 ntBASIC3.13□□□□□ -1.91
EPHB3P54753 MIR3613-201ENST00000579844 87 ntBASIC3.13□□□□□ -1.91
EPHB3P54753 MIR4513-201ENST00000581077 86 ntBASIC3.13□□□□□ -1.91
EPHB3P54753 ELOCP29-201ENST00000588193 334 ntBASIC3.13□□□□□ -1.91
EPHB3P54753 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.13□□□□□ -1.91
EPHB3P54753 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.13□□□□□ -1.91
EPHB3P54753 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 202.2 ms