Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC023442.1-201ENST00000531247 422 ntBASIC1.97□□□□□ -2.09
ABCD3P28288 AC084364.2-201ENST00000546924 395 ntBASIC1.97□□□□□ -2.09
ABCD3P28288 AL359075.3-201ENST00000613288 217 ntBASIC1.97□□□□□ -2.09
ABCD3P28288 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.97□□□□□ -2.09
ABCD3P28288 MTND4P1-201ENST00000457501 1466 ntBASIC1.96□□□□□ -2.1
ABCD3P28288 Y_RNA.5-201ENST00000362334 102 ntBASIC1.96□□□□□ -2.1
ABCD3P28288 Y_RNA.61-201ENST00000362835 102 ntBASIC1.96□□□□□ -2.1
ABCD3P28288 Y_RNA.112-201ENST00000363250 102 ntBASIC1.96□□□□□ -2.1
ABCD3P28288 SNORA63D-201ENST00000364359 132 ntBASIC1.96□□□□□ -2.1
ABCD3P28288 RNU6-296P-201ENST00000384608 107 ntBASIC1.96□□□□□ -2.1
ABCD3P28288 RNA5SP323-201ENST00000391094 133 ntBASIC1.96□□□□□ -2.1
ABCD3P28288 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.96□□□□□ -2.1
ABCD3P28288 AC018865.2-201ENST00000423631 129 ntBASIC1.96□□□□□ -2.1
ABCD3P28288 SUMO1P2-201ENST00000452524 304 ntBASIC1.96□□□□□ -2.1
ABCD3P28288 RNA5SP481-201ENST00000516814 122 ntBASIC1.96□□□□□ -2.1
ABCD3P28288 SNORA31.17-201ENST00000516953 127 ntBASIC1.96□□□□□ -2.1
ABCD3P28288 AC092447.9-201ENST00000603395 144 ntBASIC1.96□□□□□ -2.1
ABCD3P28288 AL050343.2-201ENST00000607338 280 ntBASIC1.96□□□□□ -2.1
ABCD3P28288 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.96□□□□□ -2.1
ABCD3P28288 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
ABCD3P28288 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
ABCD3P28288 Y_RNA.395-201ENST00000383945 109 ntBASIC1.95□□□□□ -2.1
ABCD3P28288 Y_RNA.496-201ENST00000384444 101 ntBASIC1.95□□□□□ -2.1
ABCD3P28288 SNORA64-201ENST00000384674 134 ntBASIC1.95□□□□□ -2.1
ABCD3P28288 MIR676-201ENST00000390702 67 ntBASIC1.95□□□□□ -2.1
ABCD3P28288 MRPL35P1-201ENST00000404272 572 ntBASIC1.95□□□□□ -2.1
ABCD3P28288 RNU2-7P-201ENST00000410794 178 ntBASIC1.95□□□□□ -2.1
ABCD3P28288 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.95□□□□□ -2.1
ABCD3P28288 SNORD65B-201ENST00000459126 73 ntBASIC1.95□□□□□ -2.1
ABCD3P28288 RPL23AP42-201ENST00000471152 471 ntBASIC1.95□□□□□ -2.1
ABCD3P28288 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
ABCD3P28288 RNU6-1012P-201ENST00000516606 109 ntBASIC1.95□□□□□ -2.1
ABCD3P28288 RNU1-142P-201ENST00000516682 145 ntBASIC1.95□□□□□ -2.1
ABCD3P28288 MIR4448-201ENST00000584360 86 ntBASIC1.95□□□□□ -2.1
ABCD3P28288 AC090971.5-201ENST00000621102 293 ntBASIC1.95□□□□□ -2.1
ABCD3P28288 AL160413.1-201ENST00000622780 310 ntBASIC1.95□□□□□ -2.1
ABCD3P28288 AC090574.1-201ENST00000623186 233 ntBASIC1.95□□□□□ -2.1
ABCD3P28288 AL606534.2-204ENST00000635008 178 ntBASIC1.95□□□□□ -2.1
ABCD3P28288 CENPCP1-201ENST00000533085 2578 ntBASIC1.95□□□□□ -2.1
ABCD3P28288 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
ABCD3P28288 AL359851.1-201ENST00000569460 4997 ntBASIC1.95□□□□□ -2.1
ABCD3P28288 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
ABCD3P28288 RNU6-661P-201ENST00000362409 107 ntBASIC1.94□□□□□ -2.1
ABCD3P28288 RNU6-797P-201ENST00000363101 109 ntBASIC1.94□□□□□ -2.1
ABCD3P28288 Y_RNA.526-201ENST00000384572 110 ntBASIC1.94□□□□□ -2.1
ABCD3P28288 AL023284.1-201ENST00000403956 276 ntBASIC1.94□□□□□ -2.1
ABCD3P28288 SDAD1P3-201ENST00000427380 333 ntBASIC1.94□□□□□ -2.1
ABCD3P28288 AC096644.2-201ENST00000429278 159 ntBASIC1.94□□□□□ -2.1
ABCD3P28288 Y_RNA.639-201ENST00000458981 102 ntBASIC1.94□□□□□ -2.1
ABCD3P28288 HMGN1P13-201ENST00000505795 138 ntBASIC1.94□□□□□ -2.1
ABCD3P28288 RNU6-408P-201ENST00000515910 100 ntBASIC1.94□□□□□ -2.1
ABCD3P28288 RNU1-41P-201ENST00000516161 162 ntBASIC1.94□□□□□ -2.1
ABCD3P28288 RNU1-48P-201ENST00000516400 162 ntBASIC1.94□□□□□ -2.1
ABCD3P28288 SNORA40.14-201ENST00000516543 86 ntBASIC1.94□□□□□ -2.1
ABCD3P28288 SNORA44.1-201ENST00000517031 108 ntBASIC1.94□□□□□ -2.1
ABCD3P28288 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.94□□□□□ -2.1
ABCD3P28288 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.94□□□□□ -2.1
ABCD3P28288 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.94□□□□□ -2.1
ABCD3P28288 MIR4648-201ENST00000580107 72 ntBASIC1.94□□□□□ -2.1
ABCD3P28288 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.94□□□□□ -2.1
ABCD3P28288 U6.73-201ENST00000619194 103 ntBASIC1.94□□□□□ -2.1
ABCD3P28288 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.94□□□□□ -2.1
ABCD3P28288 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.94□□□□□ -2.1
ABCD3P28288 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
ABCD3P28288 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
ABCD3P28288 RNU6-271P-201ENST00000363858 105 ntBASIC1.93□□□□□ -2.1
ABCD3P28288 SNORD42.2-201ENST00000365570 69 ntBASIC1.93□□□□□ -2.1
ABCD3P28288 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
ABCD3P28288 RNU11-5P-201ENST00000391216 129 ntBASIC1.93□□□□□ -2.1
ABCD3P28288 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.93□□□□□ -2.1
ABCD3P28288 FTH1P12-201ENST00000432137 551 ntBASIC1.93□□□□□ -2.1
ABCD3P28288 MRPS10P1-201ENST00000448483 130 ntBASIC1.93□□□□□ -2.1
ABCD3P28288 CHEK2P4-201ENST00000450340 246 ntBASIC1.93□□□□□ -2.1
ABCD3P28288 RNU6-475P-201ENST00000516073 104 ntBASIC1.93□□□□□ -2.1
ABCD3P28288 RNU4-77P-201ENST00000516692 156 ntBASIC1.93□□□□□ -2.1
ABCD3P28288 GNAI2P1-201ENST00000541815 315 ntBASIC1.93□□□□□ -2.1
ABCD3P28288 MIR5002-201ENST00000584713 97 ntBASIC1.93□□□□□ -2.1
ABCD3P28288 AC002984.1-201ENST00000591692 448 ntBASIC1.93□□□□□ -2.1
ABCD3P28288 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.93□□□□□ -2.1
ABCD3P28288 MIR219B-201ENST00000637023 88 ntBASIC1.93□□□□□ -2.1
ABCD3P28288 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
ABCD3P28288 SNORA67.3-201ENST00000384366 140 ntBASIC1.92□□□□□ -2.1
ABCD3P28288 Y_RNA.535-201ENST00000384612 99 ntBASIC1.92□□□□□ -2.1
ABCD3P28288 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
ABCD3P28288 RNA5SP467-201ENST00000391274 118 ntBASIC1.92□□□□□ -2.1
ABCD3P28288 AL160004.2-201ENST00000432935 350 ntBASIC1.92□□□□□ -2.1
ABCD3P28288 AL137792.2-201ENST00000443484 235 ntBASIC1.92□□□□□ -2.1
ABCD3P28288 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.92□□□□□ -2.1
ABCD3P28288 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.92□□□□□ -2.1
ABCD3P28288 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.92□□□□□ -2.1
ABCD3P28288 RPL26P26-201ENST00000480251 434 ntBASIC1.92□□□□□ -2.1
ABCD3P28288 RPL36AP21-201ENST00000490372 323 ntBASIC1.92□□□□□ -2.1
ABCD3P28288 RPS29P21-201ENST00000496272 170 ntBASIC1.92□□□□□ -2.1
ABCD3P28288 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.92□□□□□ -2.1
ABCD3P28288 AC103810.8-201ENST00000607347 118 ntBASIC1.92□□□□□ -2.1
ABCD3P28288 uc_338.22-201ENST00000622722 187 ntBASIC1.92□□□□□ -2.1
ABCD3P28288 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.92□□□□□ -2.1
ABCD3P28288 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
ABCD3P28288 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
ABCD3P28288 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms