Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC025166.1-201ENST00000612411 163 ntBASIC3.55□□□□□ -1.84
NFKB1P19838 CR392039.5-201ENST00000623201 510 ntBASIC3.55□□□□□ -1.84
NFKB1P19838 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.55□□□□□ -1.84
NFKB1P19838 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.55□□□□□ -1.84
NFKB1P19838 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.55□□□□□ -1.84
NFKB1P19838 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.55□□□□□ -1.84
NFKB1P19838 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
NFKB1P19838 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NFKB1P19838 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.54□□□□□ -1.84
NFKB1P19838 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
NFKB1P19838 RNU6-486P-201ENST00000363116 107 ntBASIC3.54□□□□□ -1.84
NFKB1P19838 RNU6-1209P-201ENST00000363655 107 ntBASIC3.54□□□□□ -1.84
NFKB1P19838 RNA5SP387-201ENST00000364226 106 ntBASIC3.54□□□□□ -1.84
NFKB1P19838 AP000567.1-201ENST00000406413 156 ntBASIC3.54□□□□□ -1.84
NFKB1P19838 RNU6-1077P-201ENST00000410506 102 ntBASIC3.54□□□□□ -1.84
NFKB1P19838 RNA5SP127-201ENST00000411051 133 ntBASIC3.54□□□□□ -1.84
NFKB1P19838 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.54□□□□□ -1.84
NFKB1P19838 CYCSP4-201ENST00000429682 331 ntBASIC3.54□□□□□ -1.84
NFKB1P19838 AL357552.1-201ENST00000445254 415 ntBASIC3.54□□□□□ -1.84
NFKB1P19838 U3.44-201ENST00000458938 192 ntBASIC3.54□□□□□ -1.84
NFKB1P19838 Y_RNA.649-201ENST00000459077 103 ntBASIC3.54□□□□□ -1.84
NFKB1P19838 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.54□□□□□ -1.84
NFKB1P19838 AC097462.1-201ENST00000514125 324 ntBASIC3.54□□□□□ -1.84
NFKB1P19838 SNORA18.4-201ENST00000516440 124 ntBASIC3.54□□□□□ -1.84
NFKB1P19838 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.54□□□□□ -1.84
NFKB1P19838 AL365205.2-201ENST00000594586 68 ntBASIC3.54□□□□□ -1.84
NFKB1P19838 AC013412.1-201ENST00000610687 192 ntBASIC3.54□□□□□ -1.84
NFKB1P19838 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.54□□□□□ -1.84
NFKB1P19838 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NFKB1P19838 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.54□□□□□ -1.84
NFKB1P19838 MFSD8-233ENST00000641482 4860 ntBASIC3.53□□□□□ -1.84
NFKB1P19838 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.53□□□□□ -1.84
NFKB1P19838 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NFKB1P19838 RNU6-32P-201ENST00000383948 107 ntBASIC3.53□□□□□ -1.84
NFKB1P19838 RNU6-1083P-201ENST00000384022 107 ntBASIC3.53□□□□□ -1.84
NFKB1P19838 RNU6-13P-201ENST00000384248 107 ntBASIC3.53□□□□□ -1.84
NFKB1P19838 Y_RNA.495-201ENST00000384435 112 ntBASIC3.53□□□□□ -1.84
NFKB1P19838 RNU6-12P-201ENST00000384604 107 ntBASIC3.53□□□□□ -1.84
NFKB1P19838 RNU6-41P-201ENST00000384741 107 ntBASIC3.53□□□□□ -1.84
NFKB1P19838 U6atac.2-201ENST00000408644 118 ntBASIC3.53□□□□□ -1.84
NFKB1P19838 AL133547.1-201ENST00000448546 220 ntBASIC3.53□□□□□ -1.84
NFKB1P19838 OR9P1P-201ENST00000496431 281 ntBASIC3.53□□□□□ -1.84
NFKB1P19838 RNU7-149P-201ENST00000516739 59 ntBASIC3.53□□□□□ -1.84
NFKB1P19838 RNU1-104P-201ENST00000517280 175 ntBASIC3.53□□□□□ -1.84
NFKB1P19838 AL022345.2-201ENST00000606307 135 ntBASIC3.53□□□□□ -1.84
NFKB1P19838 Pinc.1-201ENST00000616452 154 ntBASIC3.53□□□□□ -1.84
NFKB1P19838 AC012442.3-202ENST00000636742 206 ntBASIC3.53□□□□□ -1.84
NFKB1P19838 AC009093.8-201ENST00000641769 292 ntBASIC3.53□□□□□ -1.84
NFKB1P19838 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
NFKB1P19838 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.53□□□□□ -1.84
NFKB1P19838 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
NFKB1P19838 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NFKB1P19838 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
NFKB1P19838 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
NFKB1P19838 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.52□□□□□ -1.85
NFKB1P19838 RNU1-72P-201ENST00000362976 153 ntBASIC3.52□□□□□ -1.85
NFKB1P19838 SNORA62.3-201ENST00000365110 153 ntBASIC3.52□□□□□ -1.85
NFKB1P19838 MIR548A1-201ENST00000385041 97 ntBASIC3.52□□□□□ -1.85
NFKB1P19838 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.52□□□□□ -1.85
NFKB1P19838 AC106707.2-201ENST00000484182 374 ntBASIC3.52□□□□□ -1.85
NFKB1P19838 SNORA70.19-201ENST00000516717 90 ntBASIC3.52□□□□□ -1.85
NFKB1P19838 AC007751.1-201ENST00000529260 376 ntBASIC3.52□□□□□ -1.85
NFKB1P19838 MIR3117-201ENST00000584034 78 ntBASIC3.52□□□□□ -1.85
NFKB1P19838 MIR4438-201ENST00000585271 93 ntBASIC3.52□□□□□ -1.85
NFKB1P19838 AC090115.4-201ENST00000609970 188 ntBASIC3.52□□□□□ -1.85
NFKB1P19838 XIST_intron.1-201ENST00000619444 68 ntBASIC3.52□□□□□ -1.85
NFKB1P19838 AC093908.1-201ENST00000623125 8092 ntBASIC3.52□□□□□ -1.85
NFKB1P19838 AC058791.1-201ENST00000608412 3198 ntBASIC3.51□□□□□ -1.85
NFKB1P19838 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NFKB1P19838 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.51□□□□□ -1.85
NFKB1P19838 AC091152.2-201ENST00000591628 2569 ntBASIC3.51□□□□□ -1.85
NFKB1P19838 MIR30E-201ENST00000362104 92 ntBASIC3.51□□□□□ -1.85
NFKB1P19838 Y_RNA.66-201ENST00000362862 102 ntBASIC3.51□□□□□ -1.85
NFKB1P19838 Y_RNA.486-201ENST00000384398 107 ntBASIC3.51□□□□□ -1.85
NFKB1P19838 MTCO1P44-201ENST00000441935 243 ntBASIC3.51□□□□□ -1.85
NFKB1P19838 AL031737.1-201ENST00000450125 223 ntBASIC3.51□□□□□ -1.85
NFKB1P19838 AC025518.1-201ENST00000479856 347 ntBASIC3.51□□□□□ -1.85
NFKB1P19838 RNU6-586P-201ENST00000517265 104 ntBASIC3.51□□□□□ -1.85
NFKB1P19838 AC011604.1-201ENST00000545978 196 ntBASIC3.51□□□□□ -1.85
NFKB1P19838 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
NFKB1P19838 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
NFKB1P19838 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NFKB1P19838 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.51□□□□□ -1.85
NFKB1P19838 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NFKB1P19838 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
NFKB1P19838 AL136360.1-201ENST00000503377 1900 ntBASIC3.5□□□□□ -1.85
NFKB1P19838 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
NFKB1P19838 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NFKB1P19838 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NFKB1P19838 MTND5P18-201ENST00000445624 1801 ntBASIC3.5□□□□□ -1.85
NFKB1P19838 MIR450A1-201ENST00000362262 91 ntBASIC3.5□□□□□ -1.85
NFKB1P19838 RNA5SP295-201ENST00000362655 121 ntBASIC3.5□□□□□ -1.85
NFKB1P19838 SNORA73.2-201ENST00000364946 201 ntBASIC3.5□□□□□ -1.85
NFKB1P19838 RNU6-438P-201ENST00000365561 103 ntBASIC3.5□□□□□ -1.85
NFKB1P19838 SNORA11.1-201ENST00000408133 129 ntBASIC3.5□□□□□ -1.85
NFKB1P19838 MTATP6P21-201ENST00000440681 189 ntBASIC3.5□□□□□ -1.85
NFKB1P19838 snoU13.22-201ENST00000459428 104 ntBASIC3.5□□□□□ -1.85
NFKB1P19838 RPS29P24-201ENST00000486345 171 ntBASIC3.5□□□□□ -1.85
NFKB1P19838 RNU7-172P-201ENST00000517125 64 ntBASIC3.5□□□□□ -1.85
NFKB1P19838 RNU6-1231P-201ENST00000517185 103 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms