Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SNHG28P0DPA3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SNHG28P0DPA3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.48□□□□□ -2.01
SNHG28P0DPA3 MTND5P35-201ENST00000557537 1720 ntBASIC2.48□□□□□ -2.01
SNHG28P0DPA3 AC110491.1-201ENST00000562191 2010 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 AC080100.1-201ENST00000624239 5356 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SNHG28P0DPA3 AC099654.7-201ENST00000635788 2127 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
SNHG28P0DPA3 RNU6-1290P-201ENST00000362957 109 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 RNU6-454P-201ENST00000364292 107 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 RNA5SP139-201ENST00000364340 117 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 Y_RNA.272-201ENST00000364696 102 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 RNU2-2P-201ENST00000410396 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 HMGN2P30-201ENST00000423237 256 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 AL590383.1-201ENST00000428602 75 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 AC244670.1-201ENST00000436879 112 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U8.19-201ENST00000459095 133 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 HSPE1P18-201ENST00000517602 280 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.47□□□□□ -2.01
SNHG28P0DPA3 AC016256.1-201ENST00000547971 354 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 AC021739.1-201ENST00000559631 174 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 AC108706.1-201ENST00000611053 297 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.15-201ENST00000611544 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 AC010999.1-201ENST00000611856 324 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.16-201ENST00000613119 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.12-201ENST00000613778 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.20-201ENST00000613956 192 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.9-201ENST00000615427 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.11-201ENST00000616345 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.2-201ENST00000616535 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.3-201ENST00000617785 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.19-201ENST00000618602 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 RNU2-1-201ENST00000618664 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.6-201ENST00000619225 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.5-201ENST00000619465 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.10-201ENST00000620268 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 ZNF355P-201ENST00000427301 3216 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.40-201ENST00000362645 93 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 RNU6-727P-201ENST00000363592 107 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.412-201ENST00000384001 104 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 RNU6-142P-201ENST00000384019 107 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.580-201ENST00000391004 95 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 AL133475.1-201ENST00000404414 305 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 AL357139.1-201ENST00000407792 426 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 AC023141.4-201ENST00000412031 328 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 AC012306.1-201ENST00000423267 114 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 RAB28P5-201ENST00000427490 651 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 AC124916.1-201ENST00000444020 547 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 RPL39P29-201ENST00000447779 157 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.46□□□□□ -2.02
SNHG28P0DPA3 AC005042.3-201ENST00000453230 174 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 RNA5SP402-201ENST00000517148 110 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.46□□□□□ -2.02
SNHG28P0DPA3 AL356157.2-201ENST00000605122 111 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 AC037487.3-201ENST00000606668 112 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.46□□□□□ -2.02
SNHG28P0DPA3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SNHG28P0DPA3 SNORD114-1-201ENST00000362705 72 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 RNU6-1272P-201ENST00000362776 107 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 RNU6-529P-201ENST00000363383 104 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 RNU6-1280P-201ENST00000365211 107 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 SNORD116-18-201ENST00000383961 92 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 RNU6-514P-201ENST00000384208 107 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 RNU6-1035P-201ENST00000384477 107 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.571-201ENST00000384753 98 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.595-201ENST00000410403 105 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 RNU6-735P-201ENST00000410612 107 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 RNU6-1245P-201ENST00000411130 106 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 AL445646.1-201ENST00000431784 216 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 RNU6-625P-201ENST00000459412 107 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 AC007215.1-201ENST00000464893 276 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 AC016632.1-201ENST00000503994 196 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 DEFB131C-201ENST00000528817 165 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 AC006199.1-201ENST00000548728 219 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.45□□□□□ -2.02
SNHG28P0DPA3 MIR5692C2-201ENST00000577959 77 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 AC090897.2-201ENST00000581715 130 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 HMGN2P15-201ENST00000585707 270 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 RNU2-4P-201ENST00000606190 192 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 AL365222.1-201ENST00000614661 98 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 ADAM3A-203ENST00000461344 2157 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SNHG28P0DPA3 RNU6-801P-201ENST00000364087 105 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.262-201ENST00000364641 102 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 RNU6-22P-201ENST00000384355 107 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 SNORA22C-201ENST00000384614 134 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 RNU6-959P-201ENST00000384671 107 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.568-201ENST00000384742 113 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.572-201ENST00000384757 98 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 RNU6-763P-201ENST00000390865 106 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 SNORA46.1-201ENST00000391069 153 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 RNA5SP504-201ENST00000410676 117 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms