Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SNHG28P0DPA3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SNHG28P0DPA3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.48□□□□□ -2.01
SNHG28P0DPA3 MTND5P35-201ENST00000557537 1720 ntBASIC2.48□□□□□ -2.01
SNHG28P0DPA3 AC110491.1-201ENST00000562191 2010 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 AC080100.1-201ENST00000624239 5356 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SNHG28P0DPA3 AC099654.7-201ENST00000635788 2127 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
SNHG28P0DPA3 RNU6-1290P-201ENST00000362957 109 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 RNU6-454P-201ENST00000364292 107 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 RNA5SP139-201ENST00000364340 117 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 Y_RNA.272-201ENST00000364696 102 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 RNU2-2P-201ENST00000410396 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 HMGN2P30-201ENST00000423237 256 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 AL590383.1-201ENST00000428602 75 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 AC244670.1-201ENST00000436879 112 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U8.19-201ENST00000459095 133 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 HSPE1P18-201ENST00000517602 280 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.47□□□□□ -2.01
SNHG28P0DPA3 AC016256.1-201ENST00000547971 354 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 AC021739.1-201ENST00000559631 174 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 AC108706.1-201ENST00000611053 297 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.15-201ENST00000611544 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 AC010999.1-201ENST00000611856 324 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.16-201ENST00000613119 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.12-201ENST00000613778 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.20-201ENST00000613956 192 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.9-201ENST00000615427 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.11-201ENST00000616345 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.2-201ENST00000616535 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.3-201ENST00000617785 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.19-201ENST00000618602 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 RNU2-1-201ENST00000618664 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.6-201ENST00000619225 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.5-201ENST00000619465 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 U2.10-201ENST00000620268 191 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.47□□□□□ -2.01
SNHG28P0DPA3 ZNF355P-201ENST00000427301 3216 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.40-201ENST00000362645 93 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 RNU6-727P-201ENST00000363592 107 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.412-201ENST00000384001 104 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 RNU6-142P-201ENST00000384019 107 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.580-201ENST00000391004 95 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 AL133475.1-201ENST00000404414 305 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 AL357139.1-201ENST00000407792 426 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 AC023141.4-201ENST00000412031 328 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 AC012306.1-201ENST00000423267 114 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 RAB28P5-201ENST00000427490 651 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 AC124916.1-201ENST00000444020 547 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 RPL39P29-201ENST00000447779 157 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.46□□□□□ -2.02
SNHG28P0DPA3 AC005042.3-201ENST00000453230 174 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 RNA5SP402-201ENST00000517148 110 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.46□□□□□ -2.02
SNHG28P0DPA3 AL356157.2-201ENST00000605122 111 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 AC037487.3-201ENST00000606668 112 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.46□□□□□ -2.02
SNHG28P0DPA3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.46□□□□□ -2.02
SNHG28P0DPA3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SNHG28P0DPA3 SNORD114-1-201ENST00000362705 72 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 RNU6-1272P-201ENST00000362776 107 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 RNU6-529P-201ENST00000363383 104 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 RNU6-1280P-201ENST00000365211 107 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 SNORD116-18-201ENST00000383961 92 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 RNU6-514P-201ENST00000384208 107 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 RNU6-1035P-201ENST00000384477 107 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.571-201ENST00000384753 98 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.595-201ENST00000410403 105 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 RNU6-735P-201ENST00000410612 107 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 RNU6-1245P-201ENST00000411130 106 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 AL445646.1-201ENST00000431784 216 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 RNU6-625P-201ENST00000459412 107 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 AC007215.1-201ENST00000464893 276 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 AC016632.1-201ENST00000503994 196 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 DEFB131C-201ENST00000528817 165 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 AC006199.1-201ENST00000548728 219 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.45□□□□□ -2.02
SNHG28P0DPA3 MIR5692C2-201ENST00000577959 77 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 AC090897.2-201ENST00000581715 130 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 HMGN2P15-201ENST00000585707 270 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 RNU2-4P-201ENST00000606190 192 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 AL365222.1-201ENST00000614661 98 ntBASIC2.45□□□□□ -2.02
SNHG28P0DPA3 ADAM3A-203ENST00000461344 2157 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SNHG28P0DPA3 RNU6-801P-201ENST00000364087 105 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.262-201ENST00000364641 102 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 RNU6-22P-201ENST00000384355 107 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 SNORA22C-201ENST00000384614 134 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 RNU6-959P-201ENST00000384671 107 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.568-201ENST00000384742 113 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 Y_RNA.572-201ENST00000384757 98 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 RNU6-763P-201ENST00000390865 106 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 SNORA46.1-201ENST00000391069 153 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 RNA5SP504-201ENST00000410676 117 ntBASIC2.44□□□□□ -2.02
SNHG28P0DPA3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 187.5 ms