Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AL357075.2-201ENST00000614906 189 ntBASIC1.58□□□□□ -2.16
HDAC3O15379 AC084768.2-201ENST00000622736 221 ntBASIC1.58□□□□□ -2.16
HDAC3O15379 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HDAC3O15379 BX322639.1-202ENST00000423987 2213 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 AL356292.1-201ENST00000283110 373 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 RNU6-1301P-201ENST00000362724 104 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 Y_RNA.153-201ENST00000363615 91 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 RNU6-281P-201ENST00000384212 103 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 RNU6-541P-201ENST00000384709 110 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
HDAC3O15379 RNU6-985P-201ENST00000410182 104 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 RN7SKP101-201ENST00000411376 320 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.57□□□□□ -2.16
HDAC3O15379 AC114482.1-201ENST00000418010 247 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 AC004386.2-201ENST00000441858 148 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 U8.20-201ENST00000459445 131 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 MTATP8P1-201ENST00000467115 207 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.57□□□□□ -2.16
HDAC3O15379 RNU6-475P-201ENST00000516073 104 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 SNORA40.14-201ENST00000516543 86 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 AC034114.1-201ENST00000520293 285 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 AC040926.1-201ENST00000530195 238 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 AC113195.1-201ENST00000579952 141 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 AC006504.6-201ENST00000590142 199 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 PART1_1.1-201ENST00000611761 217 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.57□□□□□ -2.16
HDAC3O15379 AC011476.5-201ENST00000615594 130 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 AC137590.2-201ENST00000619709 240 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.57□□□□□ -2.16
HDAC3O15379 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HDAC3O15379 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HDAC3O15379 RNU6-879P-201ENST00000364328 108 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 Y_RNA.389-201ENST00000383924 113 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 MIR329-1-201ENST00000385028 80 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 MIR561-201ENST00000385216 97 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 MIR628-201ENST00000385229 95 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 MIR1262-201ENST00000408276 93 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 RNU6-130P-201ENST00000411112 103 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.56□□□□□ -2.16
HDAC3O15379 HSPE1P24-201ENST00000450782 238 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.56□□□□□ -2.16
HDAC3O15379 AC091179.3-201ENST00000474761 144 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 RNU6-764P-201ENST00000516396 105 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 SNORA25.14-201ENST00000516481 132 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 AC093023.1-201ENST00000547375 507 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 AL442163.3-201ENST00000554110 156 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 MIR5006-201ENST00000583027 110 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 AC008737.2-201ENST00000599446 118 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 MZT1P2-201ENST00000604387 248 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 AC124312.5-201ENST00000604451 268 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.56□□□□□ -2.16
HDAC3O15379 AL021879.1-201ENST00000611756 288 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 MIR6715A-201ENST00000615929 79 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 AL078596.1-201ENST00000624856 447 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 U6.92-201ENST00000636464 89 ntBASIC1.56□□□□□ -2.16
HDAC3O15379 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.55□□□□□ -2.16
HDAC3O15379 MIR340-201ENST00000362125 95 ntBASIC1.55□□□□□ -2.16
HDAC3O15379 Y_RNA.26-201ENST00000362539 101 ntBASIC1.55□□□□□ -2.16
HDAC3O15379 RNU6-727P-201ENST00000363592 107 ntBASIC1.55□□□□□ -2.16
HDAC3O15379 SNORD14.1-201ENST00000365609 90 ntBASIC1.55□□□□□ -2.16
HDAC3O15379 RNU6-926P-201ENST00000384075 107 ntBASIC1.55□□□□□ -2.16
HDAC3O15379 Y_RNA.455-201ENST00000384230 98 ntBASIC1.55□□□□□ -2.16
HDAC3O15379 MIR583-201ENST00000384846 75 ntBASIC1.55□□□□□ -2.16
HDAC3O15379 U8.13-201ENST00000390842 128 ntBASIC1.55□□□□□ -2.16
HDAC3O15379 SNORA40.18-201ENST00000391200 128 ntBASIC1.55□□□□□ -2.16
HDAC3O15379 AC009237.7-201ENST00000447357 229 ntBASIC1.55□□□□□ -2.16
HDAC3O15379 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.55□□□□□ -2.16
HDAC3O15379 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.55□□□□□ -2.16
HDAC3O15379 PRELID3BP1-201ENST00000457142 540 ntBASIC1.55□□□□□ -2.16
HDAC3O15379 AC010655.3-201ENST00000478818 450 ntBASIC1.55□□□□□ -2.16
HDAC3O15379 Y_RNA.720-201ENST00000517166 92 ntBASIC1.55□□□□□ -2.16
HDAC3O15379 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.55□□□□□ -2.16
HDAC3O15379 AK6P2-201ENST00000549020 471 ntBASIC1.55□□□□□ -2.16
HDAC3O15379 AC026470.2-201ENST00000561492 181 ntBASIC1.55□□□□□ -2.16
HDAC3O15379 RAC1P9-201ENST00000604990 392 ntBASIC1.55□□□□□ -2.16
HDAC3O15379 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.55□□□□□ -2.16
HDAC3O15379 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.55□□□□□ -2.16
HDAC3O15379 TCL6_2.1-201ENST00000615162 119 ntBASIC1.55□□□□□ -2.16
HDAC3O15379 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
HDAC3O15379 RNU6-545P-201ENST00000362681 104 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 SNORD87-201ENST00000364849 89 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 Y_RNA.415-201ENST00000384012 112 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 Y_RNA.422-201ENST00000384054 114 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 RNU6-1145P-201ENST00000384246 107 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 RNU6-611P-201ENST00000384276 104 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 SNORA67.2-201ENST00000384300 149 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 RNY3P4-201ENST00000384428 101 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.54□□□□□ -2.16
HDAC3O15379 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.54□□□□□ -2.16
HDAC3O15379 AL357134.1-201ENST00000445848 426 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 HMGN2P18-201ENST00000450680 270 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 RNU1-98P-201ENST00000458992 160 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 RNU7-14P-201ENST00000459331 62 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 AC093259.1-201ENST00000509755 300 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 RNU6-397P-201ENST00000516226 104 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 RNU6-911P-201ENST00000516523 104 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 RNU5F-4P-201ENST00000516581 114 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 RNA5SP54-201ENST00000516951 92 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 RNU6-250P-201ENST00000516958 103 ntBASIC1.54□□□□□ -2.16
HDAC3O15379 Y_RNA.715-201ENST00000517082 110 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 190.3 ms