Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 Y_RNA.783-201ENST00000613546 102 ntBASIC1.85□□□□□ -2.11
TO15178 AL357075.2-201ENST00000614906 189 ntBASIC1.85□□□□□ -2.11
TO15178 AC006001.4-201ENST00000622243 395 ntBASIC1.85□□□□□ -2.11
TO15178 AL606534.2-204ENST00000635008 178 ntBASIC1.85□□□□□ -2.11
TO15178 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.85□□□□□ -2.11
TO15178 Y_RNA.27-201ENST00000362540 103 ntBASIC1.84□□□□□ -2.11
TO15178 RNU6-1266P-201ENST00000362794 105 ntBASIC1.84□□□□□ -2.11
TO15178 RNA5SP160-201ENST00000364866 120 ntBASIC1.84□□□□□ -2.11
TO15178 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.84□□□□□ -2.11
TO15178 ELOCP21-201ENST00000412558 336 ntBASIC1.84□□□□□ -2.11
TO15178 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.84□□□□□ -2.11
TO15178 RPL23AP7-203ENST00000449021 469 ntBASIC1.84□□□□□ -2.11
TO15178 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.84□□□□□ -2.11
TO15178 RNU6-625P-201ENST00000459412 107 ntBASIC1.84□□□□□ -2.11
TO15178 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.84□□□□□ -2.11
TO15178 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.84□□□□□ -2.11
TO15178 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.84□□□□□ -2.11
TO15178 MIR5089-201ENST00000580047 84 ntBASIC1.84□□□□□ -2.11
TO15178 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.84□□□□□ -2.11
TO15178 AC006157.1-201ENST00000611750 366 ntBASIC1.84□□□□□ -2.11
TO15178 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.84□□□□□ -2.11
TO15178 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
TO15178 Y_RNA.11-201ENST00000362375 109 ntBASIC1.83□□□□□ -2.12
TO15178 Y_RNA.813-201ENST00000364639 102 ntBASIC1.83□□□□□ -2.12
TO15178 Y_RNA.445-201ENST00000384168 102 ntBASIC1.83□□□□□ -2.12
TO15178 RNY1P14-201ENST00000384426 108 ntBASIC1.83□□□□□ -2.12
TO15178 SNORD78.2-201ENST00000391076 69 ntBASIC1.83□□□□□ -2.12
TO15178 RNA5SP475-201ENST00000410568 110 ntBASIC1.83□□□□□ -2.12
TO15178 FCF1P4-201ENST00000448326 183 ntBASIC1.83□□□□□ -2.12
TO15178 CHEK2P4-201ENST00000450340 246 ntBASIC1.83□□□□□ -2.12
TO15178 YWHAEP4-201ENST00000505390 198 ntBASIC1.83□□□□□ -2.12
TO15178 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.83□□□□□ -2.12
TO15178 SNORA40.14-201ENST00000516543 86 ntBASIC1.83□□□□□ -2.12
TO15178 RNU4-77P-201ENST00000516692 156 ntBASIC1.83□□□□□ -2.12
TO15178 MIR3684-201ENST00000579779 74 ntBASIC1.83□□□□□ -2.12
TO15178 MIR4713-201ENST00000582691 75 ntBASIC1.83□□□□□ -2.12
TO15178 AC022513.1-201ENST00000624512 117 ntBASIC1.83□□□□□ -2.12
TO15178 MIR410-201ENST00000362222 80 ntBASIC1.82□□□□□ -2.12
TO15178 RNU6-862P-201ENST00000362804 105 ntBASIC1.82□□□□□ -2.12
TO15178 snoU2-30.2-201ENST00000362805 70 ntBASIC1.82□□□□□ -2.12
TO15178 RNU6-1310P-201ENST00000384153 107 ntBASIC1.82□□□□□ -2.12
TO15178 OOSP1P1-201ENST00000423265 274 ntBASIC1.82□□□□□ -2.12
TO15178 AL160004.2-201ENST00000432935 350 ntBASIC1.82□□□□□ -2.12
TO15178 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.82□□□□□ -2.12
TO15178 RN7SL274P-201ENST00000492268 272 ntBASIC1.82□□□□□ -2.12
TO15178 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TO15178 RNVU1-2-201ENST00000516326 135 ntBASIC1.82□□□□□ -2.12
TO15178 GNAI2P1-201ENST00000541815 315 ntBASIC1.82□□□□□ -2.12
TO15178 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.82□□□□□ -2.12
TO15178 MIR338-201ENST00000636369 67 ntBASIC1.82□□□□□ -2.12
TO15178 SNORD114-1-201ENST00000362705 72 ntBASIC1.81□□□□□ -2.12
TO15178 Y_RNA.128-201ENST00000363391 112 ntBASIC1.81□□□□□ -2.12
TO15178 RNU1-96P-201ENST00000364163 162 ntBASIC1.81□□□□□ -2.12
TO15178 RNU6-926P-201ENST00000384075 107 ntBASIC1.81□□□□□ -2.12
TO15178 Y_RNA.526-201ENST00000384572 110 ntBASIC1.81□□□□□ -2.12
TO15178 MIR515-2-201ENST00000384883 83 ntBASIC1.81□□□□□ -2.12
TO15178 MIR515-1-201ENST00000384884 83 ntBASIC1.81□□□□□ -2.12
TO15178 AC016909.1-201ENST00000415916 166 ntBASIC1.81□□□□□ -2.12
TO15178 RPL31P63-201ENST00000422565 375 ntBASIC1.81□□□□□ -2.12
TO15178 CST2P1-201ENST00000425770 87 ntBASIC1.81□□□□□ -2.12
TO15178 RAB28P5-201ENST00000427490 651 ntBASIC1.81□□□□□ -2.12
TO15178 HMGN2P34-201ENST00000437647 269 ntBASIC1.81□□□□□ -2.12
TO15178 Y_RNA.631-201ENST00000459607 101 ntBASIC1.81□□□□□ -2.12
TO15178 RNU6-408P-201ENST00000515910 100 ntBASIC1.81□□□□□ -2.12
TO15178 RNU6-475P-201ENST00000516073 104 ntBASIC1.81□□□□□ -2.12
TO15178 RNU6-1012P-201ENST00000516606 109 ntBASIC1.81□□□□□ -2.12
TO15178 HSBP1P1-201ENST00000555205 166 ntBASIC1.81□□□□□ -2.12
TO15178 MIR5094-201ENST00000578766 85 ntBASIC1.81□□□□□ -2.12
TO15178 MIR3124-201ENST00000582636 67 ntBASIC1.81□□□□□ -2.12
TO15178 MIR5188-201ENST00000583467 113 ntBASIC1.81□□□□□ -2.12
TO15178 RPS29P30-201ENST00000600975 111 ntBASIC1.81□□□□□ -2.12
TO15178 AC134503.1-201ENST00000633048 54 ntBASIC1.81□□□□□ -2.12
TO15178 MIR3674-201ENST00000636576 68 ntBASIC1.81□□□□□ -2.12
TO15178 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
TO15178 ZNF72P-201ENST00000425869 1908 ntBASIC1.8□□□□□ -2.12
TO15178 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
TO15178 AL117342.1-201ENST00000404861 406 ntBASIC1.8□□□□□ -2.12
TO15178 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.8□□□□□ -2.12
TO15178 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.8□□□□□ -2.12
TO15178 MTCO2P12-201ENST00000427426 682 ntBASIC1.8□□□□□ -2.12
TO15178 AC099677.2-201ENST00000436385 175 ntBASIC1.8□□□□□ -2.12
TO15178 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.8□□□□□ -2.12
TO15178 SNORA25.10-201ENST00000515926 124 ntBASIC1.8□□□□□ -2.12
TO15178 RN7SKP295-201ENST00000517264 153 ntBASIC1.8□□□□□ -2.12
TO15178 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.8□□□□□ -2.12
TO15178 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.8□□□□□ -2.12
TO15178 AC069114.2-201ENST00000604699 304 ntBASIC1.8□□□□□ -2.12
TO15178 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.8□□□□□ -2.12
TO15178 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.8□□□□□ -2.12
TO15178 RNU6-417P-201ENST00000384712 107 ntBASIC1.79□□□□□ -2.12
TO15178 MRPL35P1-201ENST00000404272 572 ntBASIC1.79□□□□□ -2.12
TO15178 SUMO2P12-201ENST00000405924 140 ntBASIC1.79□□□□□ -2.12
TO15178 MCFD2P1-201ENST00000417812 300 ntBASIC1.79□□□□□ -2.12
TO15178 SDAD1P3-201ENST00000427380 333 ntBASIC1.79□□□□□ -2.12
TO15178 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.79□□□□□ -2.12
TO15178 MTND4P19-201ENST00000446659 478 ntBASIC1.79□□□□□ -2.12
TO15178 AC093852.1-201ENST00000503587 266 ntBASIC1.79□□□□□ -2.12
TO15178 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TO15178 SUB1P4-201ENST00000566062 339 ntBASIC1.79□□□□□ -2.12
TO15178 MIR4659A-201ENST00000580269 81 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 219.9 ms