Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 MIR4790-201ENST00000577799 79 ntBASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 AC018638.8-201ENST00000588755 281 ntBASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 AC002553.4-201ENST00000616896 331 ntBASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 MTND4P12-201ENST00000498999 1377 ntBASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 ICE2P2-201ENST00000483823 2787 ntBASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 MIR337-201ENST00000362281 93 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 RNU6-595P-201ENST00000363944 107 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 RNU6-793P-201ENST00000384233 104 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 SNORA40.6-201ENST00000391153 128 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 AL356776.1-201ENST00000406574 447 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 USP9YP30-201ENST00000430729 455 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 SNORD5.1-201ENST00000458800 75 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 AC011352.1-201ENST00000512300 793 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 RNA5SP61-201ENST00000516453 100 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 AP003033.1-201ENST00000527244 415 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 MIR8063-201ENST00000621930 81 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 SNORD33-201ENST00000362761 85 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 SNORA33-201ENST00000363664 130 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.179-201ENST00000363844 90 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 RNU6-271P-201ENST00000363858 105 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 SNORD87-201ENST00000364849 89 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.405-201ENST00000383979 100 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.451-201ENST00000384200 100 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.524-201ENST00000384564 100 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.561-201ENST00000384694 100 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 RNA5SP467-201ENST00000391274 118 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 MIR1185-2-201ENST00000408687 86 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 AC016909.1-201ENST00000415916 166 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 EIF1P1-201ENST00000421436 341 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 AL445305.1-201ENST00000432577 575 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 AC245517.4-201ENST00000448601 281 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 RNU6-329P-201ENST00000459618 107 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 AP000870.1-201ENST00000472927 406 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 AC093303.1-201ENST00000514549 295 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.682-201ENST00000516457 100 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.706-201ENST00000516933 99 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 AL160236.1-201ENST00000556317 195 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 UBL5P4-201ENST00000562584 236 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 AL161722.3-201ENST00000605789 2983 ntBASIC1.15□□□□□ -2.22
CLCF1Q9UBD9 RNU6-1266P-201ENST00000362794 105 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 Y_RNA.86-201ENST00000363020 111 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 RNU6-727P-201ENST00000363592 107 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 RNU6-1059P-201ENST00000363752 98 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 SNORD1A-201ENST00000364968 72 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 Y_RNA.415-201ENST00000384012 112 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 MIR758-201ENST00000390227 88 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 FCF1P9-201ENST00000412546 282 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 RPS26P55-201ENST00000471178 356 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AC091179.3-201ENST00000474761 144 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 HMGN1P12-201ENST00000499125 195 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AC103851.1-201ENST00000506833 274 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 RNA5SP445-201ENST00000515889 115 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 RNU1-142P-201ENST00000516682 145 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AF235103.2-201ENST00000525753 346 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 MIR4709-201ENST00000577272 72 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AC100812.1-201ENST00000607622 580 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AL359075.3-201ENST00000613288 217 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AC007014.2-201ENST00000615581 479 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 MIR7974-201ENST00000615835 79 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AC095038.3-201ENST00000634439 195 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 RNU6-842P-201ENST00000384269 107 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 RNU6-950P-201ENST00000384651 107 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 MIR10B-201ENST00000385011 110 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 MIR150-201ENST00000385048 84 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 AL161935.2-201ENST00000414627 60 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 RPS29P29-201ENST00000456396 171 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 AL163195.1-201ENST00000496941 348 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 MTND5P5-201ENST00000503764 376 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 AC079140.2-201ENST00000506193 142 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 AL137100.2-201ENST00000555786 315 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 AC010999.1-201ENST00000611856 324 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 AC139792.2-201ENST00000624218 587 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 AC068137.4-201ENST00000638485 296 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 MTND5P35-201ENST00000557537 1720 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 MIR302D-201ENST00000362275 68 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 Y_RNA.238-201ENST00000364441 102 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 235.4 ms