Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 MIR628-201ENST00000385229 95 ntBASIC2.2□□□□□ -2.06
DDX43Q9NXZ2 AL445646.1-201ENST00000431784 216 ntBASIC2.2□□□□□ -2.06
DDX43Q9NXZ2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.2□□□□□ -2.06
DDX43Q9NXZ2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.2□□□□□ -2.06
DDX43Q9NXZ2 LINC01399-202ENST00000458450 244 ntBASIC2.2□□□□□ -2.06
DDX43Q9NXZ2 snoU13.23-201ENST00000458863 104 ntBASIC2.2□□□□□ -2.06
DDX43Q9NXZ2 AC016632.1-201ENST00000503994 196 ntBASIC2.2□□□□□ -2.06
DDX43Q9NXZ2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.2□□□□□ -2.06
DDX43Q9NXZ2 SNORA31.16-201ENST00000516773 139 ntBASIC2.2□□□□□ -2.06
DDX43Q9NXZ2 MIR2355-201ENST00000517199 87 ntBASIC2.2□□□□□ -2.06
DDX43Q9NXZ2 AC023157.2-201ENST00000540596 141 ntBASIC2.2□□□□□ -2.06
DDX43Q9NXZ2 MIR5002-201ENST00000584713 97 ntBASIC2.2□□□□□ -2.06
DDX43Q9NXZ2 AC002984.1-201ENST00000591692 448 ntBASIC2.2□□□□□ -2.06
DDX43Q9NXZ2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 AC092268.1-201ENST00000342691 405 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 Y_RNA.19-201ENST00000362462 99 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 RNU6-1159P-201ENST00000362933 107 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 SNORD115-8-201ENST00000363856 82 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 Y_RNA.183-201ENST00000363882 113 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 SNORD115-38-201ENST00000365037 82 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 Y_RNA.376-201ENST00000365638 108 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 Y_RNA.483-201ENST00000384380 101 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 MIR153-2-201ENST00000385225 87 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 RNU6-907P-201ENST00000390924 102 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 Y_RNA.597-201ENST00000410463 100 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 AL139156.1-201ENST00000412785 841 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 RPL21P38-201ENST00000418090 167 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 SDAD1P3-201ENST00000427380 333 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 AC244670.1-201ENST00000436879 112 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 PCNPP5-201ENST00000452246 481 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 RNU7-87P-201ENST00000459343 62 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 MTND1P19-201ENST00000511780 315 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 DEFB122-202ENST00000569013 197 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 AC136932.1-201ENST00000574771 208 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 RPS29P30-201ENST00000600975 111 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 Y_RNA.783-201ENST00000613546 102 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 AC092881.1-201ENST00000638218 2733 ntBASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.19□□□□□ -2.06
DDX43Q9NXZ2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 Y_RNA.307-201ENST00000365022 117 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 RNU6-142P-201ENST00000384019 107 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 MIR518A2-201ENST00000384966 87 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 MIR10B-201ENST00000385011 110 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 RNU2-2P-201ENST00000410396 191 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 Y_RNA.618-201ENST00000410949 107 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 RPS26P42-201ENST00000413485 326 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 AC108059.2-201ENST00000434626 151 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 GPM6BP3-201ENST00000442797 145 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 snoU13.6-201ENST00000458785 104 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 Y_RNA.680-201ENST00000516441 93 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 RNU6-58P-201ENST00000517143 103 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 AL034555.1-201ENST00000604816 211 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 AC062037.2-201ENST00000610137 73 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 U2.15-201ENST00000611544 191 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 U2.16-201ENST00000613119 191 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 U2.12-201ENST00000613778 191 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 U2.20-201ENST00000613956 192 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 U2.9-201ENST00000615427 191 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 U2.11-201ENST00000616345 191 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 U2.2-201ENST00000616535 191 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 U2.3-201ENST00000617785 191 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 U2.19-201ENST00000618602 191 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 RNU2-1-201ENST00000618664 191 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 U2.6-201ENST00000619225 191 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 U2.5-201ENST00000619465 191 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 U2.10-201ENST00000620268 191 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 AC130454.1-201ENST00000622948 401 ntBASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.18□□□□□ -2.06
DDX43Q9NXZ2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 RNU6-137P-201ENST00000363680 108 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 Y_RNA.188-201ENST00000363952 111 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 RNU6-281P-201ENST00000384212 103 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 Y_RNA.461-201ENST00000384263 103 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 MIR17-201ENST00000385012 84 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 MIR29C-201ENST00000385231 88 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 SNORD115-46-201ENST00000390982 71 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 RNU6-159P-201ENST00000391080 106 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 USP9YP16-201ENST00000430287 407 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 AC016700.2-201ENST00000446011 156 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 AC245102.2-201ENST00000448956 180 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 USP9YP23-201ENST00000455085 407 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 PRELID3BP1-201ENST00000457142 540 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 SNORD127-201ENST00000458892 86 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 SNRPGP7-201ENST00000469016 106 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 AC098869.1-201ENST00000481627 292 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 RNU6-1114P-201ENST00000516022 107 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 RNY3P15-201ENST00000516297 97 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 RNU6-965P-201ENST00000516721 96 ntBASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.17□□□□□ -2.06
DDX43Q9NXZ2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 397.9 ms