Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SNORD12-201ENST00000391002 90 ntBASIC0.91□□□□□ -2.26
LRRC40Q9H9A6 CALM2P3-201ENST00000400429 449 ntBASIC0.91□□□□□ -2.26
LRRC40Q9H9A6 AC002429.1-201ENST00000437672 148 ntBASIC0.91□□□□□ -2.26
LRRC40Q9H9A6 AC245047.7-201ENST00000440265 293 ntBASIC0.91□□□□□ -2.26
LRRC40Q9H9A6 SNORD124-201ENST00000459577 104 ntBASIC0.91□□□□□ -2.26
LRRC40Q9H9A6 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
LRRC40Q9H9A6 MTCO2P30-201ENST00000503662 364 ntBASIC0.91□□□□□ -2.26
LRRC40Q9H9A6 AC010424.1-201ENST00000506336 297 ntBASIC0.91□□□□□ -2.26
LRRC40Q9H9A6 RNA5SP168-201ENST00000516642 112 ntBASIC0.91□□□□□ -2.26
LRRC40Q9H9A6 APOOP3-201ENST00000536787 586 ntBASIC0.91□□□□□ -2.26
LRRC40Q9H9A6 OSBPL9P5-201ENST00000542581 171 ntBASIC0.91□□□□□ -2.26
LRRC40Q9H9A6 MIR4438-201ENST00000585271 93 ntBASIC0.91□□□□□ -2.26
LRRC40Q9H9A6 RNU6-89P-201ENST00000606519 100 ntBASIC0.91□□□□□ -2.26
LRRC40Q9H9A6 SNORA28-201ENST00000606769 126 ntBASIC0.91□□□□□ -2.26
LRRC40Q9H9A6 ELL2P3-201ENST00000457883 1602 ntBASIC0.9□□□□□ -2.26
LRRC40Q9H9A6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
LRRC40Q9H9A6 RNU6-1085P-201ENST00000363576 107 ntBASIC0.9□□□□□ -2.27
LRRC40Q9H9A6 SNORD114-24-201ENST00000365029 72 ntBASIC0.9□□□□□ -2.27
LRRC40Q9H9A6 AL355796.1-201ENST00000406706 323 ntBASIC0.9□□□□□ -2.27
LRRC40Q9H9A6 AC108729.3-201ENST00000513484 108 ntBASIC0.9□□□□□ -2.27
LRRC40Q9H9A6 AC027419.1-201ENST00000522976 328 ntBASIC0.9□□□□□ -2.27
LRRC40Q9H9A6 MIR6863-201ENST00000636112 90 ntBASIC0.9□□□□□ -2.27
LRRC40Q9H9A6 Y_RNA.124-201ENST00000363339 93 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 RNU6-137P-201ENST00000363680 108 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 RNU6-280P-201ENST00000364145 104 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 RNU6-522P-201ENST00000364497 107 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 RNU6-1080P-201ENST00000383982 107 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 SNORD116-8-201ENST00000384365 95 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 MIR653-201ENST00000385279 96 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 AL451046.2-201ENST00000403074 277 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 AL603825.1-201ENST00000438481 80 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 TPT1P7-201ENST00000458300 517 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 AC091179.3-201ENST00000474761 144 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 AC005840.1-201ENST00000498412 377 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 TRMT112P2-201ENST00000512910 132 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 RNU6-322P-201ENST00000516010 103 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 SNORD79.1-201ENST00000516069 84 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 AC090049.2-201ENST00000550377 109 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 AC027288.2-201ENST00000553028 243 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 AL158211.1-201ENST00000566763 763 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 POLR3GP2-201ENST00000588366 668 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 AC080078.2-201ENST00000603766 501 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 AC211469.2-201ENST00000605461 205 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 AL158209.2-201ENST00000619266 216 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 AC090582.1-201ENST00000636321 199 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 AC099654.12-201ENST00000639868 649 ntBASIC0.89□□□□□ -2.27
LRRC40Q9H9A6 RNU6-793P-201ENST00000384233 104 ntBASIC0.88□□□□□ -2.27
LRRC40Q9H9A6 SNORD41-201ENST00000386967 70 ntBASIC0.88□□□□□ -2.27
LRRC40Q9H9A6 RNU6-321P-201ENST00000410912 106 ntBASIC0.88□□□□□ -2.27
LRRC40Q9H9A6 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.88□□□□□ -2.27
LRRC40Q9H9A6 RPL30P16-201ENST00000419341 429 ntBASIC0.88□□□□□ -2.27
LRRC40Q9H9A6 ERLEC1P1-201ENST00000433806 578 ntBASIC0.88□□□□□ -2.27
LRRC40Q9H9A6 NDUFA5P4-201ENST00000436704 385 ntBASIC0.88□□□□□ -2.27
LRRC40Q9H9A6 SNORD65B-201ENST00000459126 73 ntBASIC0.88□□□□□ -2.27
LRRC40Q9H9A6 RPS27P22-201ENST00000478056 241 ntBASIC0.88□□□□□ -2.27
LRRC40Q9H9A6 HMGN1P7-201ENST00000491722 313 ntBASIC0.88□□□□□ -2.27
LRRC40Q9H9A6 PDCD5P2-201ENST00000507570 312 ntBASIC0.88□□□□□ -2.27
LRRC40Q9H9A6 AC023157.2-201ENST00000540596 141 ntBASIC0.88□□□□□ -2.27
LRRC40Q9H9A6 AC068790.6-201ENST00000602558 258 ntBASIC0.88□□□□□ -2.27
LRRC40Q9H9A6 MIR6857-201ENST00000613267 93 ntBASIC0.88□□□□□ -2.27
LRRC40Q9H9A6 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.88□□□□□ -2.27
LRRC40Q9H9A6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
LRRC40Q9H9A6 Y_RNA.77-201ENST00000362962 107 ntBASIC0.87□□□□□ -2.27
LRRC40Q9H9A6 Y_RNA.100-201ENST00000363141 102 ntBASIC0.87□□□□□ -2.27
LRRC40Q9H9A6 Y_RNA.265-201ENST00000364677 108 ntBASIC0.87□□□□□ -2.27
LRRC40Q9H9A6 Y_RNA.363-201ENST00000365529 113 ntBASIC0.87□□□□□ -2.27
LRRC40Q9H9A6 Y_RNA.373-201ENST00000365600 103 ntBASIC0.87□□□□□ -2.27
LRRC40Q9H9A6 DEFB108C-201ENST00000400154 252 ntBASIC0.87□□□□□ -2.27
LRRC40Q9H9A6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.87□□□□□ -2.27
LRRC40Q9H9A6 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.87□□□□□ -2.27
LRRC40Q9H9A6 AC114482.1-201ENST00000418010 247 ntBASIC0.87□□□□□ -2.27
LRRC40Q9H9A6 RPL39P39-201ENST00000455840 151 ntBASIC0.87□□□□□ -2.27
LRRC40Q9H9A6 FAM71BP1-201ENST00000604431 523 ntBASIC0.87□□□□□ -2.27
LRRC40Q9H9A6 AC009248.2-201ENST00000619826 254 ntBASIC0.87□□□□□ -2.27
LRRC40Q9H9A6 RNU5F-3P-201ENST00000363767 117 ntBASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 Y_RNA.179-201ENST00000363844 90 ntBASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 RNU6-1042P-201ENST00000384204 107 ntBASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 SNORA80D-201ENST00000384488 135 ntBASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 RNU6-159P-201ENST00000391080 106 ntBASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 AF228730.1-201ENST00000397972 663 ntBASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 RNU6-1068P-201ENST00000410958 103 ntBASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 MTND4P18-201ENST00000447010 465 ntBASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 MRPS10P1-201ENST00000448483 130 ntBASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 AC010469.2-201ENST00000496412 480 ntBASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 ACA59.1-201ENST00000515966 143 ntBASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 AL590705.4-201ENST00000532209 134 ntBASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 CBX3P8-201ENST00000532412 525 ntBASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 AL121579.1-201ENST00000555129 305 ntBASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 UBL5P4-201ENST00000562584 236 ntBASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 AP000770.2-201ENST00000623694 100 ntBASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.86□□□□□ -2.27
LRRC40Q9H9A6 Y_RNA.184-201ENST00000363884 108 ntBASIC0.85□□□□□ -2.27
LRRC40Q9H9A6 Y_RNA.372-201ENST00000365599 102 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 275.5 ms