Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 Y_RNA.415-201ENST00000384012 112 ntBASIC1.4□□□□□ -2.19
VMP1Q96GC9 SNORD116-4-201ENST00000384733 96 ntBASIC1.4□□□□□ -2.19
VMP1Q96GC9 MRPL42P3-201ENST00000401492 326 ntBASIC1.4□□□□□ -2.19
VMP1Q96GC9 MIR1323-201ENST00000408090 73 ntBASIC1.4□□□□□ -2.19
VMP1Q96GC9 RPL37P10-201ENST00000412884 288 ntBASIC1.4□□□□□ -2.19
VMP1Q96GC9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.4□□□□□ -2.19
VMP1Q96GC9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.4□□□□□ -2.19
VMP1Q96GC9 MTATP6P13-201ENST00000438531 667 ntBASIC1.4□□□□□ -2.19
VMP1Q96GC9 RNU7-175P-201ENST00000515915 61 ntBASIC1.4□□□□□ -2.19
VMP1Q96GC9 AK6P2-201ENST00000549020 471 ntBASIC1.4□□□□□ -2.19
VMP1Q96GC9 AC015720.1-201ENST00000565251 277 ntBASIC1.4□□□□□ -2.19
VMP1Q96GC9 AC004584.2-201ENST00000570407 410 ntBASIC1.4□□□□□ -2.19
VMP1Q96GC9 AL645939.4-201ENST00000604495 135 ntBASIC1.4□□□□□ -2.19
VMP1Q96GC9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.4□□□□□ -2.19
VMP1Q96GC9 Y_RNA.179-201ENST00000363844 90 ntBASIC1.39□□□□□ -2.19
VMP1Q96GC9 RNU6-440P-201ENST00000390882 105 ntBASIC1.39□□□□□ -2.19
VMP1Q96GC9 MIR1304-201ENST00000408243 91 ntBASIC1.39□□□□□ -2.19
VMP1Q96GC9 RNU4-62P-201ENST00000410125 130 ntBASIC1.39□□□□□ -2.19
VMP1Q96GC9 AC245047.3-201ENST00000429428 127 ntBASIC1.39□□□□□ -2.19
VMP1Q96GC9 AC091179.3-201ENST00000474761 144 ntBASIC1.39□□□□□ -2.19
VMP1Q96GC9 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.39□□□□□ -2.19
VMP1Q96GC9 RNU7-99P-201ENST00000516271 62 ntBASIC1.39□□□□□ -2.19
VMP1Q96GC9 Y_RNA.675-201ENST00000516389 149 ntBASIC1.39□□□□□ -2.19
VMP1Q96GC9 AC134698.4-201ENST00000523451 826 ntBASIC1.39□□□□□ -2.19
VMP1Q96GC9 UBL5P4-201ENST00000562584 236 ntBASIC1.39□□□□□ -2.19
VMP1Q96GC9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.39□□□□□ -2.19
VMP1Q96GC9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.39□□□□□ -2.19
VMP1Q96GC9 AL512598.1-201ENST00000610158 273 ntBASIC1.39□□□□□ -2.19
VMP1Q96GC9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.39□□□□□ -2.19
VMP1Q96GC9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
VMP1Q96GC9 MIR378A-201ENST00000362177 66 ntBASIC1.38□□□□□ -2.19
VMP1Q96GC9 SNORA70.7-201ENST00000384159 133 ntBASIC1.38□□□□□ -2.19
VMP1Q96GC9 Y_RNA.450-201ENST00000384198 113 ntBASIC1.38□□□□□ -2.19
VMP1Q96GC9 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.38□□□□□ -2.19
VMP1Q96GC9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.38□□□□□ -2.19
VMP1Q96GC9 FRG2DP-202ENST00000566967 323 ntBASIC1.38□□□□□ -2.19
VMP1Q96GC9 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.38□□□□□ -2.19
VMP1Q96GC9 Y_RNA.89-201ENST00000363031 102 ntBASIC1.37□□□□□ -2.19
VMP1Q96GC9 RNU4-12P-201ENST00000365233 139 ntBASIC1.37□□□□□ -2.19
VMP1Q96GC9 Y_RNA.516-201ENST00000384541 124 ntBASIC1.37□□□□□ -2.19
VMP1Q96GC9 AL034345.1-201ENST00000407768 123 ntBASIC1.37□□□□□ -2.19
VMP1Q96GC9 RNU6-174P-201ENST00000410406 106 ntBASIC1.37□□□□□ -2.19
VMP1Q96GC9 AL354695.1-201ENST00000427935 228 ntBASIC1.37□□□□□ -2.19
VMP1Q96GC9 AL603825.1-201ENST00000438481 80 ntBASIC1.37□□□□□ -2.19
VMP1Q96GC9 RN7SKP210-201ENST00000459176 261 ntBASIC1.37□□□□□ -2.19
VMP1Q96GC9 RNU7-94P-201ENST00000459576 63 ntBASIC1.37□□□□□ -2.19
VMP1Q96GC9 APOOP3-201ENST00000536787 586 ntBASIC1.37□□□□□ -2.19
VMP1Q96GC9 U4.5-201ENST00000617137 123 ntBASIC1.37□□□□□ -2.19
VMP1Q96GC9 AC090617.10-201ENST00000624308 134 ntBASIC1.37□□□□□ -2.19
VMP1Q96GC9 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.37□□□□□ -2.19
VMP1Q96GC9 AC243428.1-201ENST00000421099 264 ntBASIC1.36□□□□□ -2.19
VMP1Q96GC9 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.36□□□□□ -2.19
VMP1Q96GC9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.36□□□□□ -2.19
VMP1Q96GC9 RPL39P38-201ENST00000467018 153 ntBASIC1.36□□□□□ -2.19
VMP1Q96GC9 AL133373.1-201ENST00000497098 94 ntBASIC1.36□□□□□ -2.19
VMP1Q96GC9 MTCYBP18-201ENST00000501056 747 ntBASIC1.36□□□□□ -2.19
VMP1Q96GC9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.36□□□□□ -2.19
VMP1Q96GC9 AC093303.1-201ENST00000514549 295 ntBASIC1.36□□□□□ -2.19
VMP1Q96GC9 RNA5SP61-201ENST00000516453 100 ntBASIC1.36□□□□□ -2.19
VMP1Q96GC9 RNU1-92P-201ENST00000517017 135 ntBASIC1.36□□□□□ -2.19
VMP1Q96GC9 RNU7-128P-201ENST00000517247 62 ntBASIC1.36□□□□□ -2.19
VMP1Q96GC9 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.36□□□□□ -2.19
VMP1Q96GC9 DNAJC19P9-201ENST00000555084 351 ntBASIC1.36□□□□□ -2.19
VMP1Q96GC9 AL162424.1-201ENST00000602325 221 ntBASIC1.36□□□□□ -2.19
VMP1Q96GC9 AL390123.1-201ENST00000603216 237 ntBASIC1.36□□□□□ -2.19
VMP1Q96GC9 AL021879.1-201ENST00000611756 288 ntBASIC1.36□□□□□ -2.19
VMP1Q96GC9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.36□□□□□ -2.19
VMP1Q96GC9 AC068137.4-201ENST00000638485 296 ntBASIC1.36□□□□□ -2.19
VMP1Q96GC9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
VMP1Q96GC9 RNU4-13P-201ENST00000364019 141 ntBASIC1.35□□□□□ -2.19
VMP1Q96GC9 RNU6-596P-201ENST00000365395 98 ntBASIC1.35□□□□□ -2.19
VMP1Q96GC9 RNU6-306P-201ENST00000384617 107 ntBASIC1.35□□□□□ -2.19
VMP1Q96GC9 Y_RNA.573-201ENST00000384763 105 ntBASIC1.35□□□□□ -2.19
VMP1Q96GC9 AL356776.1-201ENST00000406574 447 ntBASIC1.35□□□□□ -2.19
VMP1Q96GC9 BTF3P4-201ENST00000418852 495 ntBASIC1.35□□□□□ -2.19
VMP1Q96GC9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.35□□□□□ -2.19
VMP1Q96GC9 MTND4P18-201ENST00000447010 465 ntBASIC1.35□□□□□ -2.19
VMP1Q96GC9 RNU7-40P-201ENST00000516397 64 ntBASIC1.35□□□□□ -2.19
VMP1Q96GC9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.35□□□□□ -2.19
VMP1Q96GC9 AL590705.4-201ENST00000532209 134 ntBASIC1.35□□□□□ -2.19
VMP1Q96GC9 MIR3942-201ENST00000585264 109 ntBASIC1.35□□□□□ -2.19
VMP1Q96GC9 AC010999.1-201ENST00000611856 324 ntBASIC1.35□□□□□ -2.19
VMP1Q96GC9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.35□□□□□ -2.19
VMP1Q96GC9 ZNF209P-201ENST00000593450 2304 ntBASIC1.35□□□□□ -2.19
VMP1Q96GC9 Y_RNA.184-201ENST00000363884 108 ntBASIC1.34□□□□□ -2.19
VMP1Q96GC9 Y_RNA.295-201ENST00000364918 102 ntBASIC1.34□□□□□ -2.19
VMP1Q96GC9 RNU6-1215P-201ENST00000384441 102 ntBASIC1.34□□□□□ -2.19
VMP1Q96GC9 Y_RNA.533-201ENST00000384596 114 ntBASIC1.34□□□□□ -2.19
VMP1Q96GC9 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.34□□□□□ -2.19
VMP1Q96GC9 RNA5SP118-201ENST00000410385 109 ntBASIC1.34□□□□□ -2.19
VMP1Q96GC9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.34□□□□□ -2.19
VMP1Q96GC9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.34□□□□□ -2.19
VMP1Q96GC9 USMG5P1-201ENST00000425964 177 ntBASIC1.34□□□□□ -2.19
VMP1Q96GC9 RNU7-95P-201ENST00000459222 64 ntBASIC1.34□□□□□ -2.19
VMP1Q96GC9 Y_RNA.638-201ENST00000459374 113 ntBASIC1.34□□□□□ -2.19
VMP1Q96GC9 AP000870.1-201ENST00000472927 406 ntBASIC1.34□□□□□ -2.19
VMP1Q96GC9 RNU6-1314P-201ENST00000517139 104 ntBASIC1.34□□□□□ -2.19
VMP1Q96GC9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.34□□□□□ -2.19
VMP1Q96GC9 AL513423.1-201ENST00000621695 132 ntBASIC1.34□□□□□ -2.19
VMP1Q96GC9 AC068647.2-201ENST00000637380 353 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 207.2 ms