Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LETMD1Q6P1Q0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LETMD1Q6P1Q0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.22□□□□□ -1.89
LETMD1Q6P1Q0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.21□□□□□ -1.89
LETMD1Q6P1Q0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LETMD1Q6P1Q0 SNORD56.3-201ENST00000363507 71 ntBASIC3.21□□□□□ -1.9
LETMD1Q6P1Q0 RNU4-41P-201ENST00000364426 143 ntBASIC3.21□□□□□ -1.9
LETMD1Q6P1Q0 RNU6-418P-201ENST00000384035 107 ntBASIC3.21□□□□□ -1.9
LETMD1Q6P1Q0 Y_RNA.587-201ENST00000391210 103 ntBASIC3.21□□□□□ -1.9
LETMD1Q6P1Q0 SNORA79-201ENST00000408376 140 ntBASIC3.21□□□□□ -1.9
LETMD1Q6P1Q0 AL035461.1-201ENST00000421490 332 ntBASIC3.21□□□□□ -1.9
LETMD1Q6P1Q0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.21□□□□□ -1.9
LETMD1Q6P1Q0 AC010531.2-201ENST00000465012 153 ntBASIC3.21□□□□□ -1.9
LETMD1Q6P1Q0 SCARNA11.3-201ENST00000517276 130 ntBASIC3.21□□□□□ -1.9
LETMD1Q6P1Q0 AC026403.1-201ENST00000518938 295 ntBASIC3.21□□□□□ -1.9
LETMD1Q6P1Q0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.21□□□□□ -1.9
LETMD1Q6P1Q0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.21□□□□□ -1.9
LETMD1Q6P1Q0 AL020997.2-201ENST00000602607 184 ntBASIC3.21□□□□□ -1.9
LETMD1Q6P1Q0 U7.2-201ENST00000607576 63 ntBASIC3.21□□□□□ -1.9
LETMD1Q6P1Q0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.21□□□□□ -1.9
LETMD1Q6P1Q0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LETMD1Q6P1Q0 AC006435.5-201ENST00000624486 112 ntBASIC3.21□□□□□ -1.9
LETMD1Q6P1Q0 AC073476.4-201ENST00000628409 72 ntBASIC3.21□□□□□ -1.9
LETMD1Q6P1Q0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
LETMD1Q6P1Q0 Z82209.1-201ENST00000422141 2135 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 RNU6-1082P-201ENST00000364574 107 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 RNU6-597P-201ENST00000365620 102 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 RNU6-44P-201ENST00000384045 107 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 RNU6-1235P-201ENST00000384559 107 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 MIR181A2-201ENST00000384863 110 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 SNORA48.8-201ENST00000391324 134 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 AL512604.1-201ENST00000404812 257 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 RNA5SP511-201ENST00000410487 115 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 RNA5SP229-201ENST00000410809 99 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 AC092017.2-201ENST00000427600 362 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 AL353705.1-201ENST00000433468 480 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 RNU6-498P-201ENST00000459468 107 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 RN7SL542P-201ENST00000467147 294 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 RNU1-143P-201ENST00000516296 146 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 RNU6-659P-201ENST00000516454 104 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 SNORA64.4-201ENST00000516632 81 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 AC015720.1-201ENST00000565251 277 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 MIR378D2-201ENST00000580636 98 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 AC120024.3-201ENST00000603167 156 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 AL021707.8-201ENST00000609428 183 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 U1.23-201ENST00000610293 146 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 AC013412.1-201ENST00000610687 192 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 uc_338.1-201ENST00000612113 180 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 RNU1-68P-201ENST00000615382 146 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 U1.39-201ENST00000621562 146 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 AL049781.1-201ENST00000623195 3585 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 MAPK10-362ENST00000641864 4484 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 MAPK10-322ENST00000641485 4530 ntBASIC3.2□□□□□ -1.9
LETMD1Q6P1Q0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
LETMD1Q6P1Q0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LETMD1Q6P1Q0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LETMD1Q6P1Q0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LETMD1Q6P1Q0 RNA5SP119-201ENST00000362715 117 ntBASIC3.19□□□□□ -1.9
LETMD1Q6P1Q0 RNU6-1325P-201ENST00000364905 105 ntBASIC3.19□□□□□ -1.9
LETMD1Q6P1Q0 RNU6-117P-201ENST00000365415 107 ntBASIC3.19□□□□□ -1.9
LETMD1Q6P1Q0 AC016909.1-201ENST00000415916 166 ntBASIC3.19□□□□□ -1.9
LETMD1Q6P1Q0 CYCSP49-201ENST00000420810 319 ntBASIC3.19□□□□□ -1.9
LETMD1Q6P1Q0 AC008134.1-201ENST00000420943 193 ntBASIC3.19□□□□□ -1.9
LETMD1Q6P1Q0 AC010154.1-201ENST00000425857 269 ntBASIC3.19□□□□□ -1.9
LETMD1Q6P1Q0 CST9LP2-201ENST00000437612 320 ntBASIC3.19□□□□□ -1.9
LETMD1Q6P1Q0 SNORD59.2-201ENST00000516873 68 ntBASIC3.19□□□□□ -1.9
LETMD1Q6P1Q0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.19□□□□□ -1.9
LETMD1Q6P1Q0 AC006130.2-201ENST00000586202 326 ntBASIC3.19□□□□□ -1.9
LETMD1Q6P1Q0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
LETMD1Q6P1Q0 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
LETMD1Q6P1Q0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
LETMD1Q6P1Q0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.19□□□□□ -1.9
LETMD1Q6P1Q0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.19□□□□□ -1.9
LETMD1Q6P1Q0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LETMD1Q6P1Q0 AC093908.1-201ENST00000623125 8092 ntBASIC3.18□□□□□ -1.9
LETMD1Q6P1Q0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
LETMD1Q6P1Q0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LETMD1Q6P1Q0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
LETMD1Q6P1Q0 MIR148B-201ENST00000362252 99 ntBASIC3.18□□□□□ -1.9
LETMD1Q6P1Q0 RNU4-13P-201ENST00000364019 141 ntBASIC3.18□□□□□ -1.9
LETMD1Q6P1Q0 RNU6-915P-201ENST00000364943 103 ntBASIC3.18□□□□□ -1.9
LETMD1Q6P1Q0 RNU6-438P-201ENST00000365561 103 ntBASIC3.18□□□□□ -1.9
LETMD1Q6P1Q0 DYNLT3P1-201ENST00000378574 347 ntBASIC3.18□□□□□ -1.9
LETMD1Q6P1Q0 MIR218-2-201ENST00000385006 110 ntBASIC3.18□□□□□ -1.9
LETMD1Q6P1Q0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LETMD1Q6P1Q0 RPL30P4-201ENST00000429309 333 ntBASIC3.18□□□□□ -1.9
LETMD1Q6P1Q0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.18□□□□□ -1.9
LETMD1Q6P1Q0 AC115115.1-201ENST00000449927 248 ntBASIC3.18□□□□□ -1.9
LETMD1Q6P1Q0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.18□□□□□ -1.9
LETMD1Q6P1Q0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
LETMD1Q6P1Q0 RNU6-965P-201ENST00000516721 96 ntBASIC3.18□□□□□ -1.9
LETMD1Q6P1Q0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.18□□□□□ -1.9
LETMD1Q6P1Q0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 283.6 ms