Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.16□□□□□ -2.22
HMGCS1Q01581 AC025647.1-201ENST00000517879 253 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 MIR4790-201ENST00000577799 79 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 AC018638.8-201ENST00000588755 281 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 AC068790.6-201ENST00000602558 258 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 BNIP3P10-201ENST00000605360 577 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 AL050343.2-201ENST00000607338 280 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 AC139792.2-201ENST00000624218 587 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 snoZ196.1-201ENST00000625269 89 ntBASIC1.16□□□□□ -2.22
HMGCS1Q01581 AC100821.1-201ENST00000523153 2479 ntBASIC1.15□□□□□ -2.22
HMGCS1Q01581 SNORA4.2-201ENST00000365313 147 ntBASIC1.15□□□□□ -2.23
HMGCS1Q01581 RNU6-596P-201ENST00000365395 98 ntBASIC1.15□□□□□ -2.23
HMGCS1Q01581 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.15□□□□□ -2.23
HMGCS1Q01581 RPS26P55-201ENST00000471178 356 ntBASIC1.15□□□□□ -2.23
HMGCS1Q01581 AP000870.1-201ENST00000472927 406 ntBASIC1.15□□□□□ -2.23
HMGCS1Q01581 AC091179.3-201ENST00000474761 144 ntBASIC1.15□□□□□ -2.23
HMGCS1Q01581 RPL36AP21-201ENST00000490372 323 ntBASIC1.15□□□□□ -2.23
HMGCS1Q01581 MTND5P5-201ENST00000503764 376 ntBASIC1.15□□□□□ -2.23
HMGCS1Q01581 RNU6-1198P-201ENST00000516904 67 ntBASIC1.15□□□□□ -2.23
HMGCS1Q01581 RNU1-54P-201ENST00000517181 120 ntBASIC1.15□□□□□ -2.23
HMGCS1Q01581 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.15□□□□□ -2.23
HMGCS1Q01581 CBX3P8-201ENST00000532412 525 ntBASIC1.15□□□□□ -2.23
HMGCS1Q01581 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.15□□□□□ -2.23
HMGCS1Q01581 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.15□□□□□ -2.23
HMGCS1Q01581 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.15□□□□□ -2.23
HMGCS1Q01581 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.15□□□□□ -2.23
HMGCS1Q01581 AC091812.1-201ENST00000432235 1948 ntBASIC1.15□□□□□ -2.23
HMGCS1Q01581 RNU6-595P-201ENST00000363944 107 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 Y_RNA.338-201ENST00000365320 114 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 RNU6-331P-201ENST00000384724 107 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 MIR10B-201ENST00000385011 110 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 AL356776.1-201ENST00000406574 447 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 MIR1253-201ENST00000408273 105 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 RPL23AP36-201ENST00000413895 458 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 EBAG9P1-201ENST00000418955 543 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.14□□□□□ -2.23
HMGCS1Q01581 MTND1P4-201ENST00000435196 415 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 JTBP1-201ENST00000441314 247 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 RNU6-221P-201ENST00000459541 99 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 AC103851.1-201ENST00000506833 274 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 AC108729.3-201ENST00000513484 108 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 RNU7-175P-201ENST00000515915 61 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 AF235103.2-201ENST00000525753 346 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 AL590705.4-201ENST00000532209 134 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.14□□□□□ -2.23
HMGCS1Q01581 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.14□□□□□ -2.23
HMGCS1Q01581 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.14□□□□□ -2.23
HMGCS1Q01581 MIR4742-201ENST00000581069 85 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 AC073413.2-201ENST00000604332 360 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 MZT1P2-201ENST00000604387 248 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 AC016727.1-205ENST00000605437 569 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 AL355802.3-201ENST00000607571 545 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 AC084782.3-201ENST00000612282 578 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 ZNF299P-201ENST00000406845 1804 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 AC027514.1-201ENST00000588561 1603 ntBASIC1.14□□□□□ -2.23
HMGCS1Q01581 RNU6-222P-201ENST00000362438 107 ntBASIC1.13□□□□□ -2.23
HMGCS1Q01581 RNU6-137P-201ENST00000363680 108 ntBASIC1.13□□□□□ -2.23
HMGCS1Q01581 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HMGCS1Q01581 MIR1185-2-201ENST00000408687 86 ntBASIC1.13□□□□□ -2.23
HMGCS1Q01581 AC092473.1-201ENST00000441098 221 ntBASIC1.13□□□□□ -2.23
HMGCS1Q01581 AC074290.1-201ENST00000448883 135 ntBASIC1.13□□□□□ -2.23
HMGCS1Q01581 SNORD5.1-201ENST00000458800 75 ntBASIC1.13□□□□□ -2.23
HMGCS1Q01581 AL163195.1-201ENST00000496941 348 ntBASIC1.13□□□□□ -2.23
HMGCS1Q01581 AC026782.1-201ENST00000512952 449 ntBASIC1.13□□□□□ -2.23
HMGCS1Q01581 FRG2DP-202ENST00000566967 323 ntBASIC1.13□□□□□ -2.23
HMGCS1Q01581 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.13□□□□□ -2.23
HMGCS1Q01581 AL359821.1-201ENST00000605519 182 ntBASIC1.13□□□□□ -2.23
HMGCS1Q01581 AL121890.5-201ENST00000620848 304 ntBASIC1.13□□□□□ -2.23
HMGCS1Q01581 MIR8063-201ENST00000621930 81 ntBASIC1.13□□□□□ -2.23
HMGCS1Q01581 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HMGCS1Q01581 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HMGCS1Q01581 MIR302D-201ENST00000362275 68 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 SNORD1A-201ENST00000364968 72 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 RNU6-1240P-201ENST00000365155 104 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 Y_RNA.327-201ENST00000365201 102 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 RNA5SP109-201ENST00000391010 116 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.12□□□□□ -2.23
HMGCS1Q01581 MIR548F5-201ENST00000408421 86 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 FCF1P9-201ENST00000412546 282 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 AL161935.2-201ENST00000414627 60 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 EIF1P1-201ENST00000421436 341 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 MTND3P23-201ENST00000431980 347 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 AL135790.2-201ENST00000437701 267 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 AL606517.2-201ENST00000442855 241 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.12□□□□□ -2.23
HMGCS1Q01581 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.12□□□□□ -2.23
HMGCS1Q01581 snoU13.27-201ENST00000459278 104 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 RN7SKP179-201ENST00000516126 217 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 RNU6-1146P-201ENST00000516282 102 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 RNA5SP481-201ENST00000516814 122 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 AC134698.4-201ENST00000523451 826 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 AC005668.1-201ENST00000571142 476 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 MIR5695-201ENST00000579717 85 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 7SK.7-201ENST00000603504 247 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.12□□□□□ -2.23
HMGCS1Q01581 U6.108-201ENST00000637764 58 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 AC068137.4-201ENST00000638485 296 ntBASIC1.12□□□□□ -2.23
HMGCS1Q01581 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HMGCS1Q01581 ICE2P2-201ENST00000483823 2787 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 266.8 ms