Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 U6.115-201ENST00000636045 103 ntBASIC3.22□□□□□ -1.89
EPHB3P54753 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.22□□□□□ -1.89
EPHB3P54753 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
EPHB3P54753 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
EPHB3P54753 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.22□□□□□ -1.89
EPHB3P54753 AC004944.1-201ENST00000517807 3059 ntBASIC3.22□□□□□ -1.89
EPHB3P54753 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
EPHB3P54753 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
EPHB3P54753 RNU6-1298P-201ENST00000362456 101 ntBASIC3.21□□□□□ -1.9
EPHB3P54753 Y_RNA.40-201ENST00000362645 93 ntBASIC3.21□□□□□ -1.9
EPHB3P54753 RNU6-1010P-201ENST00000362757 107 ntBASIC3.21□□□□□ -1.9
EPHB3P54753 Y_RNA.393-201ENST00000383936 102 ntBASIC3.21□□□□□ -1.9
EPHB3P54753 RNU6-144P-201ENST00000383951 107 ntBASIC3.21□□□□□ -1.9
EPHB3P54753 SNORA67.2-201ENST00000384300 149 ntBASIC3.21□□□□□ -1.9
EPHB3P54753 RNU6-429P-201ENST00000384582 108 ntBASIC3.21□□□□□ -1.9
EPHB3P54753 RNU6-748P-201ENST00000384648 107 ntBASIC3.21□□□□□ -1.9
EPHB3P54753 RNU6-768P-201ENST00000384683 107 ntBASIC3.21□□□□□ -1.9
EPHB3P54753 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
EPHB3P54753 RNU4-43P-201ENST00000410628 137 ntBASIC3.21□□□□□ -1.9
EPHB3P54753 EEF1A1P41-201ENST00000414667 207 ntBASIC3.21□□□□□ -1.9
EPHB3P54753 AC027124.2-201ENST00000428249 105 ntBASIC3.21□□□□□ -1.9
EPHB3P54753 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.21□□□□□ -1.9
EPHB3P54753 CYCTP-201ENST00000504253 315 ntBASIC3.21□□□□□ -1.9
EPHB3P54753 SNORD19.2-201ENST00000516978 73 ntBASIC3.21□□□□□ -1.9
EPHB3P54753 Y_RNA.712-201ENST00000517011 92 ntBASIC3.21□□□□□ -1.9
EPHB3P54753 RPS15AP11-201ENST00000594193 385 ntBASIC3.21□□□□□ -1.9
EPHB3P54753 AC073308.1-201ENST00000623696 305 ntBASIC3.21□□□□□ -1.9
EPHB3P54753 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.21□□□□□ -1.9
EPHB3P54753 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.21□□□□□ -1.9
EPHB3P54753 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.21□□□□□ -1.9
EPHB3P54753 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
EPHB3P54753 ZNF702P-202ENST00000434269 1966 ntBASIC3.2□□□□□ -1.9
EPHB3P54753 RNU4-15P-201ENST00000362613 141 ntBASIC3.2□□□□□ -1.9
EPHB3P54753 U3.8-201ENST00000363675 217 ntBASIC3.2□□□□□ -1.9
EPHB3P54753 Y_RNA.251-201ENST00000364551 99 ntBASIC3.2□□□□□ -1.9
EPHB3P54753 AP002088.1-201ENST00000382740 395 ntBASIC3.2□□□□□ -1.9
EPHB3P54753 MT-TT-201ENST00000387460 66 ntBASIC3.2□□□□□ -1.9
EPHB3P54753 AL606845.1-201ENST00000404881 255 ntBASIC3.2□□□□□ -1.9
EPHB3P54753 AIMP1P2-201ENST00000425294 312 ntBASIC3.2□□□□□ -1.9
EPHB3P54753 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
EPHB3P54753 AL714022.1-201ENST00000439897 151 ntBASIC3.2□□□□□ -1.9
EPHB3P54753 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.2□□□□□ -1.9
EPHB3P54753 AC006539.3-201ENST00000454258 129 ntBASIC3.2□□□□□ -1.9
EPHB3P54753 AC107626.1-201ENST00000471084 183 ntBASIC3.2□□□□□ -1.9
EPHB3P54753 RAC1P5-201ENST00000512182 576 ntBASIC3.2□□□□□ -1.9
EPHB3P54753 MIR4724-201ENST00000579485 89 ntBASIC3.2□□□□□ -1.9
EPHB3P54753 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.2□□□□□ -1.9
EPHB3P54753 HMGN2P15-201ENST00000585707 270 ntBASIC3.2□□□□□ -1.9
EPHB3P54753 AC091152.3-201ENST00000604227 325 ntBASIC3.2□□□□□ -1.9
EPHB3P54753 MIR6844-201ENST00000637122 62 ntBASIC3.2□□□□□ -1.9
EPHB3P54753 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
EPHB3P54753 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
EPHB3P54753 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
EPHB3P54753 Y_RNA.43-201ENST00000362670 111 ntBASIC3.19□□□□□ -1.9
EPHB3P54753 SNORA63.4-201ENST00000362763 126 ntBASIC3.19□□□□□ -1.9
EPHB3P54753 RNU6-529P-201ENST00000363383 104 ntBASIC3.19□□□□□ -1.9
EPHB3P54753 SNORA5B-201ENST00000363786 132 ntBASIC3.19□□□□□ -1.9
EPHB3P54753 U3.9-201ENST00000363823 204 ntBASIC3.19□□□□□ -1.9
EPHB3P54753 RNU6-728P-201ENST00000365375 104 ntBASIC3.19□□□□□ -1.9
EPHB3P54753 Y_RNA.510-201ENST00000384511 114 ntBASIC3.19□□□□□ -1.9
EPHB3P54753 RNU6-476P-201ENST00000384726 107 ntBASIC3.19□□□□□ -1.9
EPHB3P54753 RNU1-101P-201ENST00000391171 127 ntBASIC3.19□□□□□ -1.9
EPHB3P54753 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.19□□□□□ -1.9
EPHB3P54753 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.19□□□□□ -1.9
EPHB3P54753 AL365496.1-201ENST00000426885 215 ntBASIC3.19□□□□□ -1.9
EPHB3P54753 RPS27P1-201ENST00000450552 247 ntBASIC3.19□□□□□ -1.9
EPHB3P54753 HSPE1P13-201ENST00000451143 297 ntBASIC3.19□□□□□ -1.9
EPHB3P54753 SNORA70.12-201ENST00000516084 153 ntBASIC3.19□□□□□ -1.9
EPHB3P54753 RNU6-561P-201ENST00000516222 102 ntBASIC3.19□□□□□ -1.9
EPHB3P54753 RNU1-117P-201ENST00000517041 158 ntBASIC3.19□□□□□ -1.9
EPHB3P54753 NDUFB9P3-201ENST00000521269 501 ntBASIC3.19□□□□□ -1.9
EPHB3P54753 AC127455.1-201ENST00000565496 145 ntBASIC3.19□□□□□ -1.9
EPHB3P54753 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.19□□□□□ -1.9
EPHB3P54753 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.19□□□□□ -1.9
EPHB3P54753 MIR5006-201ENST00000583027 110 ntBASIC3.19□□□□□ -1.9
EPHB3P54753 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.19□□□□□ -1.9
EPHB3P54753 AC025754.2-201ENST00000606491 432 ntBASIC3.19□□□□□ -1.9
EPHB3P54753 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.19□□□□□ -1.9
EPHB3P54753 MIR6852-201ENST00000621699 66 ntBASIC3.19□□□□□ -1.9
EPHB3P54753 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
EPHB3P54753 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
EPHB3P54753 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.19□□□□□ -1.9
EPHB3P54753 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
EPHB3P54753 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
EPHB3P54753 CENPCP1-201ENST00000533085 2578 ntBASIC3.18□□□□□ -1.9
EPHB3P54753 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
EPHB3P54753 RNU6-755P-201ENST00000364400 103 ntBASIC3.18□□□□□ -1.9
EPHB3P54753 RNU6-1180P-201ENST00000364935 107 ntBASIC3.18□□□□□ -1.9
EPHB3P54753 SNORA18.2-201ENST00000383865 132 ntBASIC3.18□□□□□ -1.9
EPHB3P54753 RNY3P5-201ENST00000384127 102 ntBASIC3.18□□□□□ -1.9
EPHB3P54753 RNU6-1144P-201ENST00000384247 104 ntBASIC3.18□□□□□ -1.9
EPHB3P54753 SNORA75.5-201ENST00000391291 81 ntBASIC3.18□□□□□ -1.9
EPHB3P54753 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.18□□□□□ -1.9
EPHB3P54753 AL031183.1-201ENST00000457667 207 ntBASIC3.18□□□□□ -1.9
EPHB3P54753 RNU7-107P-201ENST00000459121 61 ntBASIC3.18□□□□□ -1.9
EPHB3P54753 AC010401.1-201ENST00000463867 348 ntBASIC3.18□□□□□ -1.9
EPHB3P54753 AC083906.5-201ENST00000503722 328 ntBASIC3.18□□□□□ -1.9
EPHB3P54753 AC090049.2-201ENST00000550377 109 ntBASIC3.18□□□□□ -1.9
EPHB3P54753 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.18□□□□□ -1.9
EPHB3P54753 AC025281.1-201ENST00000567026 265 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 304.9 ms