Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 MIR1244-1-201ENST00000612829 85 ntBASIC2.25□□□□□ -2.05
HOXC13P31276 AC022202.1-201ENST00000613515 211 ntBASIC2.25□□□□□ -2.05
HOXC13P31276 MIR1244-3-201ENST00000635744 85 ntBASIC2.25□□□□□ -2.05
HOXC13P31276 MIR1244-2-201ENST00000636449 85 ntBASIC2.25□□□□□ -2.05
HOXC13P31276 MIR1244-4-202ENST00000636813 85 ntBASIC2.25□□□□□ -2.05
HOXC13P31276 U6.104-201ENST00000637979 90 ntBASIC2.25□□□□□ -2.05
HOXC13P31276 CENPCP1-201ENST00000533085 2578 ntBASIC2.25□□□□□ -2.05
HOXC13P31276 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
HOXC13P31276 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
HOXC13P31276 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HOXC13P31276 RNU1-17P-201ENST00000363022 152 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 RNU6-1285P-201ENST00000363480 105 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 RNU6-1329P-201ENST00000365664 107 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 Y_RNA.462-201ENST00000384268 102 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 RNU6-790P-201ENST00000384479 105 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 Y_RNA.551-201ENST00000384661 102 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 Y_RNA.577-201ENST00000384794 101 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 U8.13-201ENST00000390842 128 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 RNA5SP212-201ENST00000391223 107 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 RPS29P13-201ENST00000402041 169 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 MTATP6P29-201ENST00000415057 132 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 AL117339.3-201ENST00000418733 162 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 HMGN2P19-201ENST00000425149 265 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.24□□□□□ -2.05
HOXC13P31276 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.24□□□□□ -2.05
HOXC13P31276 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.24□□□□□ -2.05
HOXC13P31276 AP003733.2-201ENST00000529409 171 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.24□□□□□ -2.05
HOXC13P31276 CBX3P8-201ENST00000532412 525 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 AC022616.8-201ENST00000533569 253 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 AC103996.1-201ENST00000555468 102 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 MIR4299-201ENST00000577899 72 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 MIR4273-201ENST00000582824 84 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 AL356157.2-201ENST00000605122 111 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 AL773524.1-201ENST00000614065 229 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 U1.36-201ENST00000620684 176 ntBASIC2.24□□□□□ -2.05
HOXC13P31276 RNY1P16-201ENST00000363063 111 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 Y_RNA.105-201ENST00000363182 111 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 RNU6-1141P-201ENST00000364520 107 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 Y_RNA.276-201ENST00000364732 109 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 MIR676-201ENST00000390702 67 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 Y_RNA.597-201ENST00000410463 100 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 RNU2-14P-201ENST00000411053 191 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 RPL21P38-201ENST00000418090 167 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 UBE2V1P4-201ENST00000425374 344 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 AL133396.1-201ENST00000432048 687 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 LINC01399-202ENST00000458450 244 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 RNU7-138P-201ENST00000459479 64 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 TRBVB-201ENST00000477100 408 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 AC098869.1-201ENST00000481627 292 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 AC104435.1-201ENST00000483483 166 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 SNORA81.3-201ENST00000517283 198 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXC13P31276 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.23□□□□□ -2.05
HOXC13P31276 MIR5002-201ENST00000584713 97 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 AL138825.1-201ENST00000618587 192 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 AC130454.1-201ENST00000622948 401 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 MIR219B-201ENST00000637023 88 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.23□□□□□ -2.05
HOXC13P31276 AC009487.4-201ENST00000624969 3585 ntBASIC2.23□□□□□ -2.05
HOXC13P31276 RNA5SP276-201ENST00000362580 94 ntBASIC2.22□□□□□ -2.05
HOXC13P31276 Y_RNA.65-201ENST00000362846 100 ntBASIC2.22□□□□□ -2.05
HOXC13P31276 RNU6-944P-201ENST00000364023 107 ntBASIC2.22□□□□□ -2.05
HOXC13P31276 Y_RNA.270-201ENST00000364693 104 ntBASIC2.22□□□□□ -2.05
HOXC13P31276 Y_RNA.338-201ENST00000365320 114 ntBASIC2.22□□□□□ -2.05
HOXC13P31276 Y_RNA.478-201ENST00000384358 107 ntBASIC2.22□□□□□ -2.05
HOXC13P31276 Y_RNA.539-201ENST00000384635 107 ntBASIC2.22□□□□□ -2.05
HOXC13P31276 SNORA17.3-201ENST00000391159 129 ntBASIC2.22□□□□□ -2.05
HOXC13P31276 RNU6-174P-201ENST00000410406 106 ntBASIC2.22□□□□□ -2.05
HOXC13P31276 AC096920.1-201ENST00000423991 241 ntBASIC2.22□□□□□ -2.05
HOXC13P31276 AL031659.1-201ENST00000447075 539 ntBASIC2.22□□□□□ -2.05
HOXC13P31276 RN7SKP210-201ENST00000459176 261 ntBASIC2.22□□□□□ -2.05
HOXC13P31276 AC093852.1-201ENST00000503587 266 ntBASIC2.22□□□□□ -2.05
HOXC13P31276 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.22□□□□□ -2.05
HOXC13P31276 MIR6845-201ENST00000613182 61 ntBASIC2.22□□□□□ -2.05
HOXC13P31276 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.05
HOXC13P31276 ZNF355P-201ENST00000427301 3216 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
HOXC13P31276 RNU4-50P-201ENST00000364361 141 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 Y_RNA.274-201ENST00000364714 101 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 Y_RNA.416-201ENST00000384014 113 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 RNU6-187P-201ENST00000384139 106 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 RNU6-708P-201ENST00000384217 107 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 Y_RNA.471-201ENST00000384312 102 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 Y_RNA.555-201ENST00000384673 110 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 MIR625-201ENST00000385047 85 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 SNORA11.4-201ENST00000408823 129 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 RNU6-121P-201ENST00000410525 99 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 AL030996.1-201ENST00000411430 235 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 SRIP3-201ENST00000413200 219 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 MTCO3P19-201ENST00000415864 321 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 AC244636.1-201ENST00000421152 228 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 AC092423.1-201ENST00000430165 186 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 AC244670.1-201ENST00000436879 112 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HOXC13P31276 FCF1P4-201ENST00000448326 183 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.21□□□□□ -2.06
HOXC13P31276 RNU6-295P-201ENST00000516901 104 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 RNU7-4P-201ENST00000516961 62 ntBASIC2.21□□□□□ -2.06
HOXC13P31276 AC018630.3-201ENST00000542637 96 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 214.5 ms