Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 RNU6-1019P-201ENST00000364424 107 ntBASIC2.02□□□□□ -2.09
ABCD3P28288 Y_RNA.252-201ENST00000364556 101 ntBASIC2.02□□□□□ -2.09
ABCD3P28288 RNY3P4-201ENST00000384428 101 ntBASIC2.02□□□□□ -2.09
ABCD3P28288 SNORD12B-201ENST00000410433 91 ntBASIC2.02□□□□□ -2.09
ABCD3P28288 SNORA40.9-201ENST00000515895 93 ntBASIC2.02□□□□□ -2.09
ABCD3P28288 MIR514B-201ENST00000516774 80 ntBASIC2.02□□□□□ -2.09
ABCD3P28288 AC018448.1-201ENST00000552843 316 ntBASIC2.02□□□□□ -2.09
ABCD3P28288 AC022254.1-201ENST00000567857 235 ntBASIC2.02□□□□□ -2.09
ABCD3P28288 MIR1273D-201ENST00000577266 86 ntBASIC2.02□□□□□ -2.09
ABCD3P28288 AC008749.1-201ENST00000597650 306 ntBASIC2.02□□□□□ -2.09
ABCD3P28288 AC010900.2-201ENST00000604508 210 ntBASIC2.02□□□□□ -2.09
ABCD3P28288 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ABCD3P28288 RNU1-115P-201ENST00000365329 160 ntBASIC2.01□□□□□ -2.09
ABCD3P28288 RNU4-52P-201ENST00000384209 138 ntBASIC2.01□□□□□ -2.09
ABCD3P28288 Y_RNA.498-201ENST00000384460 102 ntBASIC2.01□□□□□ -2.09
ABCD3P28288 ELOCP21-201ENST00000412558 336 ntBASIC2.01□□□□□ -2.09
ABCD3P28288 MTCO3P19-201ENST00000415864 321 ntBASIC2.01□□□□□ -2.09
ABCD3P28288 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.01□□□□□ -2.09
ABCD3P28288 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.01□□□□□ -2.09
ABCD3P28288 AC112492.4-201ENST00000456549 352 ntBASIC2.01□□□□□ -2.09
ABCD3P28288 RNU7-169P-201ENST00000459456 61 ntBASIC2.01□□□□□ -2.09
ABCD3P28288 AC090255.1-201ENST00000495779 349 ntBASIC2.01□□□□□ -2.09
ABCD3P28288 SCARNA16.3-201ENST00000516595 184 ntBASIC2.01□□□□□ -2.09
ABCD3P28288 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.01□□□□□ -2.09
ABCD3P28288 VN1R91P-201ENST00000594377 169 ntBASIC2.01□□□□□ -2.09
ABCD3P28288 C8orf59P2-201ENST00000603441 271 ntBASIC2.01□□□□□ -2.09
ABCD3P28288 AL357075.2-201ENST00000614906 189 ntBASIC2.01□□□□□ -2.09
ABCD3P28288 AC104985.2-201ENST00000620598 500 ntBASIC2.01□□□□□ -2.09
ABCD3P28288 AC091925.1-201ENST00000623204 462 ntBASIC2.01□□□□□ -2.09
ABCD3P28288 AC091932.3-201ENST00000624223 323 ntBASIC2.01□□□□□ -2.09
ABCD3P28288 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
ABCD3P28288 SNORA70B-201ENST00000384210 135 ntBASIC2□□□□□ -2.09
ABCD3P28288 Y_RNA.509-201ENST00000384506 99 ntBASIC2□□□□□ -2.09
ABCD3P28288 Y_RNA.579-201ENST00000390939 94 ntBASIC2□□□□□ -2.09
ABCD3P28288 SNORA48.3-201ENST00000391081 134 ntBASIC2□□□□□ -2.09
ABCD3P28288 RN7SKP223-201ENST00000410582 62 ntBASIC2□□□□□ -2.09
ABCD3P28288 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
ABCD3P28288 EBAG9P1-201ENST00000418955 543 ntBASIC2□□□□□ -2.09
ABCD3P28288 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2□□□□□ -2.09
ABCD3P28288 RNU6-625P-201ENST00000459412 107 ntBASIC2□□□□□ -2.09
ABCD3P28288 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2□□□□□ -2.09
ABCD3P28288 AC024995.1-201ENST00000523014 93 ntBASIC2□□□□□ -2.09
ABCD3P28288 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2□□□□□ -2.09
ABCD3P28288 AC006435.5-201ENST00000624486 112 ntBASIC2□□□□□ -2.09
ABCD3P28288 AC138305.3-201ENST00000624988 240 ntBASIC2□□□□□ -2.09
ABCD3P28288 Y_RNA.39-201ENST00000362620 98 ntBASIC1.99□□□□□ -2.09
ABCD3P28288 RNU6-112P-201ENST00000363599 104 ntBASIC1.99□□□□□ -2.09
ABCD3P28288 Y_RNA.197-201ENST00000364004 102 ntBASIC1.99□□□□□ -2.09
ABCD3P28288 RNU6-1310P-201ENST00000384153 107 ntBASIC1.99□□□□□ -2.09
ABCD3P28288 MIR520A-201ENST00000384862 85 ntBASIC1.99□□□□□ -2.09
ABCD3P28288 SNORD78.2-201ENST00000391076 69 ntBASIC1.99□□□□□ -2.09
ABCD3P28288 MIR1261-201ENST00000408659 82 ntBASIC1.99□□□□□ -2.09
ABCD3P28288 RN7SKP192-201ENST00000411291 327 ntBASIC1.99□□□□□ -2.09
ABCD3P28288 DPH3P2-201ENST00000422618 250 ntBASIC1.99□□□□□ -2.09
ABCD3P28288 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.99□□□□□ -2.09
ABCD3P28288 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
ABCD3P28288 FCF1P4-201ENST00000448326 183 ntBASIC1.99□□□□□ -2.09
ABCD3P28288 AC027575.1-201ENST00000481064 460 ntBASIC1.99□□□□□ -2.09
ABCD3P28288 AL137100.2-201ENST00000555786 315 ntBASIC1.99□□□□□ -2.09
ABCD3P28288 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.99□□□□□ -2.09
ABCD3P28288 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.99□□□□□ -2.09
ABCD3P28288 AC010615.1-201ENST00000594254 1764 ntBASIC1.99□□□□□ -2.09
ABCD3P28288 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ABCD3P28288 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ABCD3P28288 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.98□□□□□ -2.09
ABCD3P28288 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ABCD3P28288 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
ABCD3P28288 Y_RNA.287-201ENST00000364853 94 ntBASIC1.98□□□□□ -2.09
ABCD3P28288 RNA5SP37-201ENST00000365420 130 ntBASIC1.98□□□□□ -2.09
ABCD3P28288 RNU6-417P-201ENST00000384712 107 ntBASIC1.98□□□□□ -2.09
ABCD3P28288 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
ABCD3P28288 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.98□□□□□ -2.09
ABCD3P28288 RNA5SP475-201ENST00000410568 110 ntBASIC1.98□□□□□ -2.09
ABCD3P28288 HMGN2P38-201ENST00000423806 265 ntBASIC1.98□□□□□ -2.09
ABCD3P28288 RAB28P5-201ENST00000427490 651 ntBASIC1.98□□□□□ -2.09
ABCD3P28288 AC245047.4-201ENST00000433189 144 ntBASIC1.98□□□□□ -2.09
ABCD3P28288 AL121890.1-201ENST00000435457 205 ntBASIC1.98□□□□□ -2.09
ABCD3P28288 Y_RNA.661-201ENST00000516003 99 ntBASIC1.98□□□□□ -2.09
ABCD3P28288 AC006600.1-201ENST00000572529 153 ntBASIC1.98□□□□□ -2.09
ABCD3P28288 AL080274.1-201ENST00000605565 220 ntBASIC1.98□□□□□ -2.09
ABCD3P28288 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.98□□□□□ -2.09
ABCD3P28288 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.98□□□□□ -2.09
ABCD3P28288 MIR4272-201ENST00000635924 64 ntBASIC1.98□□□□□ -2.09
ABCD3P28288 MIR3674-201ENST00000636576 68 ntBASIC1.98□□□□□ -2.09
ABCD3P28288 AP000553.5-201ENST00000641933 54 ntBASIC1.98□□□□□ -2.09
ABCD3P28288 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ABCD3P28288 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ABCD3P28288 Y_RNA.27-201ENST00000362540 103 ntBASIC1.97□□□□□ -2.09
ABCD3P28288 U8.2-201ENST00000363156 134 ntBASIC1.97□□□□□ -2.09
ABCD3P28288 RNY3P11-201ENST00000364153 102 ntBASIC1.97□□□□□ -2.09
ABCD3P28288 Y_RNA.460-201ENST00000384255 102 ntBASIC1.97□□□□□ -2.09
ABCD3P28288 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.97□□□□□ -2.09
ABCD3P28288 HMGN2P19-201ENST00000425149 265 ntBASIC1.97□□□□□ -2.09
ABCD3P28288 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.97□□□□□ -2.09
ABCD3P28288 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.97□□□□□ -2.09
ABCD3P28288 UBL5P3-201ENST00000475112 231 ntBASIC1.97□□□□□ -2.09
ABCD3P28288 AC104435.1-201ENST00000483483 166 ntBASIC1.97□□□□□ -2.09
ABCD3P28288 AC010409.1-201ENST00000487382 476 ntBASIC1.97□□□□□ -2.09
ABCD3P28288 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.97□□□□□ -2.09
ABCD3P28288 AC010598.1-201ENST00000510378 103 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms