Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
PTPRAP18433 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
PTPRAP18433 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.64□□□□□ -1.83
PTPRAP18433 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTPRAP18433 SNORD114-7-201ENST00000362520 77 ntBASIC3.64□□□□□ -1.83
PTPRAP18433 SNORA63.4-201ENST00000362763 126 ntBASIC3.64□□□□□ -1.83
PTPRAP18433 SNORD45.3-201ENST00000363836 72 ntBASIC3.64□□□□□ -1.83
PTPRAP18433 RNU6-1082P-201ENST00000364574 107 ntBASIC3.64□□□□□ -1.83
PTPRAP18433 RNY3P5-201ENST00000384127 102 ntBASIC3.64□□□□□ -1.83
PTPRAP18433 SNORA20B-201ENST00000384220 132 ntBASIC3.64□□□□□ -1.83
PTPRAP18433 RNU6-429P-201ENST00000384582 108 ntBASIC3.64□□□□□ -1.83
PTPRAP18433 AL512604.1-201ENST00000404812 257 ntBASIC3.64□□□□□ -1.83
PTPRAP18433 AL139132.1-201ENST00000431587 344 ntBASIC3.64□□□□□ -1.83
PTPRAP18433 AC021205.2-201ENST00000480069 347 ntBASIC3.64□□□□□ -1.83
PTPRAP18433 RAC1P5-201ENST00000512182 576 ntBASIC3.64□□□□□ -1.83
PTPRAP18433 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.64□□□□□ -1.83
PTPRAP18433 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.64□□□□□ -1.83
PTPRAP18433 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.64□□□□□ -1.83
PTPRAP18433 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.64□□□□□ -1.83
PTPRAP18433 AP003357.1-201ENST00000604497 148 ntBASIC3.64□□□□□ -1.83
PTPRAP18433 AL670379.2-201ENST00000604983 252 ntBASIC3.64□□□□□ -1.83
PTPRAP18433 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPRAP18433 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPRAP18433 MIR1278-201ENST00000408753 81 ntBASIC3.63□□□□□ -1.83
PTPRAP18433 RNU6-1064P-201ENST00000410626 104 ntBASIC3.63□□□□□ -1.83
PTPRAP18433 EEF1A1P41-201ENST00000414667 207 ntBASIC3.63□□□□□ -1.83
PTPRAP18433 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPRAP18433 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPRAP18433 RNA5SP76-201ENST00000516277 87 ntBASIC3.63□□□□□ -1.83
PTPRAP18433 NDUFB9P3-201ENST00000521269 501 ntBASIC3.63□□□□□ -1.83
PTPRAP18433 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.63□□□□□ -1.83
PTPRAP18433 AC127455.1-201ENST00000565496 145 ntBASIC3.63□□□□□ -1.83
PTPRAP18433 AC120024.3-201ENST00000603167 156 ntBASIC3.63□□□□□ -1.83
PTPRAP18433 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPRAP18433 uc_338.14-201ENST00000613162 166 ntBASIC3.63□□□□□ -1.83
PTPRAP18433 CENPCP1-201ENST00000533085 2578 ntBASIC3.63□□□□□ -1.83
PTPRAP18433 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.63□□□□□ -1.83
PTPRAP18433 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPRAP18433 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPRAP18433 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPRAP18433 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.62□□□□□ -1.83
PTPRAP18433 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.62□□□□□ -1.83
PTPRAP18433 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.62□□□□□ -1.83
PTPRAP18433 SNORA27.1-201ENST00000362604 124 ntBASIC3.62□□□□□ -1.83
PTPRAP18433 Y_RNA.294-201ENST00000364916 102 ntBASIC3.62□□□□□ -1.83
PTPRAP18433 SNORD14D-201ENST00000384390 87 ntBASIC3.62□□□□□ -1.83
PTPRAP18433 SNORD67-201ENST00000390833 111 ntBASIC3.62□□□□□ -1.83
PTPRAP18433 AP000567.1-201ENST00000406413 156 ntBASIC3.62□□□□□ -1.83
PTPRAP18433 Z98941.1-201ENST00000407764 100 ntBASIC3.62□□□□□ -1.83
PTPRAP18433 Z98742.2-201ENST00000431564 187 ntBASIC3.62□□□□□ -1.83
PTPRAP18433 SNRPGP8-201ENST00000454064 226 ntBASIC3.62□□□□□ -1.83
PTPRAP18433 RNU7-57P-201ENST00000459540 60 ntBASIC3.62□□□□□ -1.83
PTPRAP18433 YWHAEP4-201ENST00000505390 198 ntBASIC3.62□□□□□ -1.83
PTPRAP18433 PDCD5P2-201ENST00000507570 312 ntBASIC3.62□□□□□ -1.83
PTPRAP18433 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPRAP18433 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPRAP18433 MIR449C-201ENST00000516047 92 ntBASIC3.62□□□□□ -1.83
PTPRAP18433 RN7SKP179-201ENST00000516126 217 ntBASIC3.62□□□□□ -1.83
PTPRAP18433 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.62□□□□□ -1.83
PTPRAP18433 POLR3GP1-201ENST00000594073 261 ntBASIC3.62□□□□□ -1.83
PTPRAP18433 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTPRAP18433 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
PTPRAP18433 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.62□□□□□ -1.83
PTPRAP18433 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.62□□□□□ -1.83
PTPRAP18433 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
PTPRAP18433 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTPRAP18433 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.61□□□□□ -1.83
PTPRAP18433 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
PTPRAP18433 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTPRAP18433 AL353746.1-201ENST00000566293 6881 ntBASIC3.61□□□□□ -1.83
PTPRAP18433 AL356292.1-201ENST00000283110 373 ntBASIC3.61□□□□□ -1.83
PTPRAP18433 MIR22-201ENST00000362190 85 ntBASIC3.61□□□□□ -1.83
PTPRAP18433 MIR1283-1-201ENST00000408494 87 ntBASIC3.61□□□□□ -1.83
PTPRAP18433 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.61□□□□□ -1.83
PTPRAP18433 EIF4EP4-201ENST00000424916 578 ntBASIC3.61□□□□□ -1.83
PTPRAP18433 RPS26P55-201ENST00000471178 356 ntBASIC3.61□□□□□ -1.83
PTPRAP18433 RPL23AP54-201ENST00000495129 419 ntBASIC3.61□□□□□ -1.83
PTPRAP18433 AC091826.1-201ENST00000514065 313 ntBASIC3.61□□□□□ -1.83
PTPRAP18433 RNA5SP356-201ENST00000515972 94 ntBASIC3.61□□□□□ -1.83
PTPRAP18433 SNORA31.21-201ENST00000517180 77 ntBASIC3.61□□□□□ -1.83
PTPRAP18433 AC090049.2-201ENST00000550377 109 ntBASIC3.61□□□□□ -1.83
PTPRAP18433 GTF3AP2-201ENST00000557014 266 ntBASIC3.61□□□□□ -1.83
PTPRAP18433 RPL30P11-203ENST00000598995 310 ntBASIC3.61□□□□□ -1.83
PTPRAP18433 AC110741.2-201ENST00000605278 268 ntBASIC3.61□□□□□ -1.83
PTPRAP18433 MIR6129-201ENST00000616087 109 ntBASIC3.61□□□□□ -1.83
PTPRAP18433 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.61□□□□□ -1.83
PTPRAP18433 AC090517.3-201ENST00000625170 141 ntBASIC3.61□□□□□ -1.83
PTPRAP18433 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTPRAP18433 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.61□□□□□ -1.83
PTPRAP18433 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
PTPRAP18433 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.61□□□□□ -1.83
PTPRAP18433 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.6□□□□□ -1.83
PTPRAP18433 RNU6-235P-201ENST00000362644 107 ntBASIC3.6□□□□□ -1.83
PTPRAP18433 RNU6-597P-201ENST00000365620 102 ntBASIC3.6□□□□□ -1.83
PTPRAP18433 RNU6-1336P-201ENST00000383886 109 ntBASIC3.6□□□□□ -1.83
PTPRAP18433 RNU6-1323P-201ENST00000384025 107 ntBASIC3.6□□□□□ -1.83
PTPRAP18433 RNU6-476P-201ENST00000384726 107 ntBASIC3.6□□□□□ -1.83
PTPRAP18433 RNY4P18-201ENST00000391107 89 ntBASIC3.6□□□□□ -1.83
PTPRAP18433 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.6□□□□□ -1.83
PTPRAP18433 AC097463.2-201ENST00000421074 142 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms