Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC093259.1-201ENST00000509755 300 ntBASIC3.75□□□□□ -1.81
TMEM88BA6NKF7 RNU6-1146P-201ENST00000516282 102 ntBASIC3.75□□□□□ -1.81
TMEM88BA6NKF7 Y_RNA.703-201ENST00000516846 111 ntBASIC3.75□□□□□ -1.81
TMEM88BA6NKF7 MRPS18CP4-201ENST00000535821 231 ntBASIC3.75□□□□□ -1.81
TMEM88BA6NKF7 MIR3117-201ENST00000584034 78 ntBASIC3.75□□□□□ -1.81
TMEM88BA6NKF7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TMEM88BA6NKF7 AC134026.1-201ENST00000623249 2239 ntBASIC3.74□□□□□ -1.81
TMEM88BA6NKF7 MIR367-201ENST00000362299 68 ntBASIC3.74□□□□□ -1.81
TMEM88BA6NKF7 RNU1-23P-201ENST00000363361 144 ntBASIC3.74□□□□□ -1.81
TMEM88BA6NKF7 RNU6-461P-201ENST00000364195 107 ntBASIC3.74□□□□□ -1.81
TMEM88BA6NKF7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.74□□□□□ -1.81
TMEM88BA6NKF7 MIR526A2-201ENST00000390198 65 ntBASIC3.74□□□□□ -1.81
TMEM88BA6NKF7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TMEM88BA6NKF7 RNU6-220P-201ENST00000390919 107 ntBASIC3.74□□□□□ -1.81
TMEM88BA6NKF7 RNU11-5P-201ENST00000391216 129 ntBASIC3.74□□□□□ -1.81
TMEM88BA6NKF7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.74□□□□□ -1.81
TMEM88BA6NKF7 AL392103.1-201ENST00000447000 198 ntBASIC3.74□□□□□ -1.81
TMEM88BA6NKF7 RNU7-141P-201ENST00000459304 62 ntBASIC3.74□□□□□ -1.81
TMEM88BA6NKF7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.74□□□□□ -1.81
TMEM88BA6NKF7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.74□□□□□ -1.81
TMEM88BA6NKF7 RNU6-1219P-201ENST00000516143 112 ntBASIC3.74□□□□□ -1.81
TMEM88BA6NKF7 RNU6-1337P-201ENST00000516525 95 ntBASIC3.74□□□□□ -1.81
TMEM88BA6NKF7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.74□□□□□ -1.81
TMEM88BA6NKF7 AC068647.2-201ENST00000637380 353 ntBASIC3.74□□□□□ -1.81
TMEM88BA6NKF7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
TMEM88BA6NKF7 CENPCP1-201ENST00000533085 2578 ntBASIC3.74□□□□□ -1.81
TMEM88BA6NKF7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
TMEM88BA6NKF7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
TMEM88BA6NKF7 Y_RNA.357-201ENST00000365487 109 ntBASIC3.73□□□□□ -1.81
TMEM88BA6NKF7 AC063976.3-201ENST00000426849 329 ntBASIC3.73□□□□□ -1.81
TMEM88BA6NKF7 RPS27AP9-201ENST00000477681 438 ntBASIC3.73□□□□□ -1.81
TMEM88BA6NKF7 Y_RNA.797-201ENST00000515977 94 ntBASIC3.73□□□□□ -1.81
TMEM88BA6NKF7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.73□□□□□ -1.81
TMEM88BA6NKF7 SUMO2P18-201ENST00000518873 252 ntBASIC3.73□□□□□ -1.81
TMEM88BA6NKF7 MIR5047-201ENST00000579212 100 ntBASIC3.73□□□□□ -1.81
TMEM88BA6NKF7 MIR4724-201ENST00000579485 89 ntBASIC3.73□□□□□ -1.81
TMEM88BA6NKF7 MIR548AY-201ENST00000617669 107 ntBASIC3.73□□□□□ -1.81
TMEM88BA6NKF7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.73□□□□□ -1.81
TMEM88BA6NKF7 AP006437.1-201ENST00000641440 3685 ntBASIC3.73□□□□□ -1.81
TMEM88BA6NKF7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 RNU1-70P-201ENST00000362618 164 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 Y_RNA.124-201ENST00000363339 93 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 Y_RNA.182-201ENST00000363880 111 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 RNU4-13P-201ENST00000364019 141 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 Y_RNA.332-201ENST00000365271 113 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 MIR626-201ENST00000385032 94 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 RNU2-2P-201ENST00000410396 191 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 AC006989.1-201ENST00000427212 131 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 RPS27P22-201ENST00000478056 241 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 AC010409.1-201ENST00000487382 476 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 RPS29P21-201ENST00000496272 170 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 AC005840.1-201ENST00000498412 377 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 AC074198.2-201ENST00000508153 258 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 RNU6-991P-201ENST00000516168 107 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 AC027419.1-201ENST00000522976 328 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 AC021269.2-201ENST00000532318 330 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 AC005972.2-201ENST00000604690 348 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 RNU2-4P-201ENST00000606190 192 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 AC090115.4-201ENST00000609970 188 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 U2.15-201ENST00000611544 191 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 U2.16-201ENST00000613119 191 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 U2.12-201ENST00000613778 191 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 U2.9-201ENST00000615427 191 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 U2.11-201ENST00000616345 191 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 U2.2-201ENST00000616535 191 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 U2.3-201ENST00000617785 191 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 U2.19-201ENST00000618602 191 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 RNU2-1-201ENST00000618664 191 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 U2.6-201ENST00000619225 191 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 U2.5-201ENST00000619465 191 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 U2.10-201ENST00000620268 191 ntBASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TMEM88BA6NKF7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.71□□□□□ -1.81
TMEM88BA6NKF7 MAPK10-373ENST00000641983 6772 ntBASIC3.71□□□□□ -1.82
TMEM88BA6NKF7 Y_RNA.23-201ENST00000362496 106 ntBASIC3.71□□□□□ -1.82
TMEM88BA6NKF7 Y_RNA.75-201ENST00000362927 97 ntBASIC3.71□□□□□ -1.82
TMEM88BA6NKF7 RNU6-1048P-201ENST00000364054 107 ntBASIC3.71□□□□□ -1.82
TMEM88BA6NKF7 RNU6-1323P-201ENST00000384025 107 ntBASIC3.71□□□□□ -1.82
TMEM88BA6NKF7 CR769767.1-201ENST00000436337 346 ntBASIC3.71□□□□□ -1.82
TMEM88BA6NKF7 AC010531.2-201ENST00000465012 153 ntBASIC3.71□□□□□ -1.82
TMEM88BA6NKF7 AC108706.1-201ENST00000611053 297 ntBASIC3.71□□□□□ -1.82
TMEM88BA6NKF7 AL590808.1-201ENST00000618696 141 ntBASIC3.71□□□□□ -1.82
TMEM88BA6NKF7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
TMEM88BA6NKF7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.71□□□□□ -1.82
TMEM88BA6NKF7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.71□□□□□ -1.82
TMEM88BA6NKF7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.71□□□□□ -1.82
TMEM88BA6NKF7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM88BA6NKF7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.7□□□□□ -1.82
TMEM88BA6NKF7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM88BA6NKF7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM88BA6NKF7 SNORD15B-201ENST00000384714 146 ntBASIC3.7□□□□□ -1.82
TMEM88BA6NKF7 MIR627-201ENST00000384979 97 ntBASIC3.7□□□□□ -1.82
TMEM88BA6NKF7 AL357552.1-201ENST00000445254 415 ntBASIC3.7□□□□□ -1.82
TMEM88BA6NKF7 RPS26P15-201ENST00000488067 348 ntBASIC3.7□□□□□ -1.82
TMEM88BA6NKF7 Y_RNA.676-201ENST00000516393 96 ntBASIC3.7□□□□□ -1.82
TMEM88BA6NKF7 U4atac.1-201ENST00000618345 95 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 224.4 ms