Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 MIR1185-2-201ENST00000408687 86 ntBASIC0.8□□□□□ -2.28
CCNB1IP1Q9NPC3 RNU2-64P-201ENST00000411315 191 ntBASIC0.8□□□□□ -2.28
CCNB1IP1Q9NPC3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.8□□□□□ -2.28
CCNB1IP1Q9NPC3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.8□□□□□ -2.28
CCNB1IP1Q9NPC3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.8□□□□□ -2.28
CCNB1IP1Q9NPC3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.8□□□□□ -2.28
CCNB1IP1Q9NPC3 ACA64.5-201ENST00000516207 127 ntBASIC0.8□□□□□ -2.28
CCNB1IP1Q9NPC3 AC211469.2-201ENST00000605461 205 ntBASIC0.8□□□□□ -2.28
CCNB1IP1Q9NPC3 AC007684.1-201ENST00000609671 477 ntBASIC0.8□□□□□ -2.28
CCNB1IP1Q9NPC3 Y_RNA.1-201ENST00000352915 104 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 U3.8-201ENST00000363675 217 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 SNORD114-27-201ENST00000363766 70 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 RNU4-66P-201ENST00000365199 138 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 Y_RNA.363-201ENST00000365529 113 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 RNU6-1080P-201ENST00000383982 107 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 MIR532-201ENST00000385025 91 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 RNU6-1186P-201ENST00000410429 97 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 RNU7-94P-201ENST00000459576 63 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 SNORD124-201ENST00000459577 104 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 RNU6-1208P-201ENST00000459588 107 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 BET1P1-201ENST00000482276 359 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 AC091885.1-201ENST00000506658 268 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 RNA5SP401-201ENST00000515920 127 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 AL590705.4-201ENST00000532209 134 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 CBX3P8-201ENST00000532412 525 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 AK6P2-201ENST00000549020 471 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 FRG2DP-202ENST00000566967 323 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 AC092807.2-201ENST00000609367 243 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 AL133215.3-201ENST00000609801 448 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 AC023510.2-201ENST00000622162 746 ntBASIC0.79□□□□□ -2.28
CCNB1IP1Q9NPC3 SNORD50.1-201ENST00000362987 71 ntBASIC0.78□□□□□ -2.28
CCNB1IP1Q9NPC3 Y_RNA.124-201ENST00000363339 93 ntBASIC0.78□□□□□ -2.28
CCNB1IP1Q9NPC3 SNORD37.1-201ENST00000390968 65 ntBASIC0.78□□□□□ -2.28
CCNB1IP1Q9NPC3 AC006461.1-201ENST00000412637 326 ntBASIC0.78□□□□□ -2.28
CCNB1IP1Q9NPC3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.78□□□□□ -2.28
CCNB1IP1Q9NPC3 RPS4XP11-201ENST00000446897 772 ntBASIC0.78□□□□□ -2.28
CCNB1IP1Q9NPC3 AC079354.2-201ENST00000453523 154 ntBASIC0.78□□□□□ -2.28
CCNB1IP1Q9NPC3 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
CCNB1IP1Q9NPC3 RNU6-113P-201ENST00000516653 101 ntBASIC0.78□□□□□ -2.28
CCNB1IP1Q9NPC3 LRRC34P1-201ENST00000542742 915 ntBASIC0.78□□□□□ -2.28
CCNB1IP1Q9NPC3 MIR4653-201ENST00000585107 83 ntBASIC0.78□□□□□ -2.28
CCNB1IP1Q9NPC3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.78□□□□□ -2.28
CCNB1IP1Q9NPC3 AC073648.5-201ENST00000603502 305 ntBASIC0.78□□□□□ -2.28
CCNB1IP1Q9NPC3 AP001330.5-201ENST00000607176 411 ntBASIC0.78□□□□□ -2.28
CCNB1IP1Q9NPC3 MIR6857-201ENST00000613267 93 ntBASIC0.78□□□□□ -2.28
CCNB1IP1Q9NPC3 FAM157A-202ENST00000615155 405 ntBASIC0.78□□□□□ -2.28
CCNB1IP1Q9NPC3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.29
CCNB1IP1Q9NPC3 SNORD115-32-201ENST00000364079 82 ntBASIC0.77□□□□□ -2.29
CCNB1IP1Q9NPC3 RNU6-933P-201ENST00000384424 107 ntBASIC0.77□□□□□ -2.29
CCNB1IP1Q9NPC3 MIR200A-201ENST00000384875 90 ntBASIC0.77□□□□□ -2.29
CCNB1IP1Q9NPC3 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
CCNB1IP1Q9NPC3 EIF4E2P1-201ENST00000393781 255 ntBASIC0.77□□□□□ -2.29
CCNB1IP1Q9NPC3 AF228730.1-201ENST00000397972 663 ntBASIC0.77□□□□□ -2.29
CCNB1IP1Q9NPC3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.77□□□□□ -2.29
CCNB1IP1Q9NPC3 PDCD5P2-201ENST00000507570 312 ntBASIC0.77□□□□□ -2.29
CCNB1IP1Q9NPC3 AC016957.1-201ENST00000534895 309 ntBASIC0.77□□□□□ -2.29
CCNB1IP1Q9NPC3 AC090049.2-201ENST00000550377 109 ntBASIC0.77□□□□□ -2.29
CCNB1IP1Q9NPC3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.77□□□□□ -2.29
CCNB1IP1Q9NPC3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CCNB1IP1Q9NPC3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 RNU6-199P-201ENST00000362954 107 ntBASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 SNORD113-7-201ENST00000363762 77 ntBASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 SNORD87-201ENST00000364849 89 ntBASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 MIR100-201ENST00000385259 80 ntBASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 RNU6-261P-201ENST00000459506 102 ntBASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 RPS3AP17-201ENST00000472594 777 ntBASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 AC083798.1-201ENST00000472671 131 ntBASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 AC091133.4-201ENST00000511142 308 ntBASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 RNU6-197P-201ENST00000516680 100 ntBASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 Y_RNA.695-201ENST00000516715 107 ntBASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 RNU6-1198P-201ENST00000516904 67 ntBASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 RNU6-58P-201ENST00000517143 103 ntBASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 AL121579.1-201ENST00000555129 305 ntBASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 AC145350.1-201ENST00000567426 208 ntBASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 MIR4778-201ENST00000577635 80 ntBASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 AC080078.2-201ENST00000603766 501 ntBASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 AC073114.1-201ENST00000612027 490 ntBASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 AC073534.2-201ENST00000620377 381 ntBASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 AC121333.1-201ENST00000567488 2709 ntBASIC0.76□□□□□ -2.29
CCNB1IP1Q9NPC3 AC018630.2-201ENST00000534866 2403 ntBASIC0.75□□□□□ -2.29
CCNB1IP1Q9NPC3 AP000568.1-201ENST00000282964 442 ntBASIC0.75□□□□□ -2.29
CCNB1IP1Q9NPC3 Y_RNA.296-201ENST00000364930 108 ntBASIC0.75□□□□□ -2.29
CCNB1IP1Q9NPC3 RNU6-969P-201ENST00000383900 105 ntBASIC0.75□□□□□ -2.29
CCNB1IP1Q9NPC3 SNORA80D-201ENST00000384488 135 ntBASIC0.75□□□□□ -2.29
CCNB1IP1Q9NPC3 MIR514A2-201ENST00000385131 88 ntBASIC0.75□□□□□ -2.29
CCNB1IP1Q9NPC3 MIR514A3-201ENST00000385132 88 ntBASIC0.75□□□□□ -2.29
CCNB1IP1Q9NPC3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
CCNB1IP1Q9NPC3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.75□□□□□ -2.29
CCNB1IP1Q9NPC3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.75□□□□□ -2.29
CCNB1IP1Q9NPC3 RPS26P48-201ENST00000491713 339 ntBASIC0.75□□□□□ -2.29
CCNB1IP1Q9NPC3 TRBVA-201ENST00000498804 316 ntBASIC0.75□□□□□ -2.29
CCNB1IP1Q9NPC3 PSMC1P5-201ENST00000512850 177 ntBASIC0.75□□□□□ -2.29
CCNB1IP1Q9NPC3 RNU6-1332P-201ENST00000516666 104 ntBASIC0.75□□□□□ -2.29
CCNB1IP1Q9NPC3 RNA5SP102-201ENST00000516865 106 ntBASIC0.75□□□□□ -2.29
CCNB1IP1Q9NPC3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.75□□□□□ -2.29
CCNB1IP1Q9NPC3 AC104383.1-201ENST00000530297 370 ntBASIC0.75□□□□□ -2.29
CCNB1IP1Q9NPC3 MIR4781-201ENST00000585250 76 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 197.9 ms