Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.13□□□□□ -1.91
YIPF4Q9BSR8 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.13□□□□□ -1.91
YIPF4Q9BSR8 HSPE1P18-201ENST00000517602 280 ntBASIC3.13□□□□□ -1.91
YIPF4Q9BSR8 AC109329.2-201ENST00000519658 482 ntBASIC3.13□□□□□ -1.91
YIPF4Q9BSR8 RPL17P51-201ENST00000605218 238 ntBASIC3.13□□□□□ -1.91
YIPF4Q9BSR8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.13□□□□□ -1.91
YIPF4Q9BSR8 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.13□□□□□ -1.91
YIPF4Q9BSR8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
YIPF4Q9BSR8 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
YIPF4Q9BSR8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
YIPF4Q9BSR8 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
YIPF4Q9BSR8 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.12□□□□□ -1.91
YIPF4Q9BSR8 SNORD56.5-201ENST00000364281 72 ntBASIC3.12□□□□□ -1.91
YIPF4Q9BSR8 TOMM22P2-201ENST00000430735 237 ntBASIC3.12□□□□□ -1.91
YIPF4Q9BSR8 RBMY2UP-201ENST00000453474 324 ntBASIC3.12□□□□□ -1.91
YIPF4Q9BSR8 HMGN1P18-201ENST00000457642 277 ntBASIC3.12□□□□□ -1.91
YIPF4Q9BSR8 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.12□□□□□ -1.91
YIPF4Q9BSR8 AC068657.1-201ENST00000520807 306 ntBASIC3.12□□□□□ -1.91
YIPF4Q9BSR8 AC018630.3-201ENST00000542637 96 ntBASIC3.12□□□□□ -1.91
YIPF4Q9BSR8 AC009127.3-201ENST00000570531 403 ntBASIC3.12□□□□□ -1.91
YIPF4Q9BSR8 MIR3651-201ENST00000630427 90 ntBASIC3.12□□□□□ -1.91
YIPF4Q9BSR8 U6.115-201ENST00000636045 103 ntBASIC3.12□□□□□ -1.91
YIPF4Q9BSR8 AC017071.1-201ENST00000564407 2204 ntBASIC3.12□□□□□ -1.91
YIPF4Q9BSR8 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
YIPF4Q9BSR8 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 Y_RNA.7-201ENST00000362352 102 ntBASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 RNU4-10P-201ENST00000364383 140 ntBASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 Y_RNA.238-201ENST00000364441 102 ntBASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 Y_RNA.272-201ENST00000364696 102 ntBASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 RNU6-818P-201ENST00000364837 108 ntBASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 RNU4-17P-201ENST00000365598 141 ntBASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 MIR613-201ENST00000385248 95 ntBASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 RNU6-381P-201ENST00000391259 108 ntBASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 AC090515.1-201ENST00000465295 476 ntBASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 SNORA48.11-201ENST00000517015 89 ntBASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 RN7SKP57-201ENST00000517248 293 ntBASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 SNORA31.26-201ENST00000517250 137 ntBASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 AC136628.3-201ENST00000521868 290 ntBASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 AC005000.2-201ENST00000605468 310 ntBASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 AC004832.4-201ENST00000608952 331 ntBASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 AL078604.3-201ENST00000615580 211 ntBASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 Z82209.1-201ENST00000422141 2135 ntBASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 AC134026.1-201ENST00000623249 2239 ntBASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.11□□□□□ -1.91
YIPF4Q9BSR8 RNU1-70P-201ENST00000362618 164 ntBASIC3.1□□□□□ -1.91
YIPF4Q9BSR8 RNU1-33P-201ENST00000364249 162 ntBASIC3.1□□□□□ -1.91
YIPF4Q9BSR8 SNORD116-18-201ENST00000383961 92 ntBASIC3.1□□□□□ -1.91
YIPF4Q9BSR8 RNU6-1274P-201ENST00000384557 107 ntBASIC3.1□□□□□ -1.91
YIPF4Q9BSR8 Y_RNA.572-201ENST00000384757 98 ntBASIC3.1□□□□□ -1.91
YIPF4Q9BSR8 RNA5SP120-201ENST00000410900 112 ntBASIC3.1□□□□□ -1.91
YIPF4Q9BSR8 AC083906.5-201ENST00000503722 328 ntBASIC3.1□□□□□ -1.91
YIPF4Q9BSR8 RNU6-1098P-201ENST00000516772 96 ntBASIC3.1□□□□□ -1.91
YIPF4Q9BSR8 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.1□□□□□ -1.91
YIPF4Q9BSR8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.1□□□□□ -1.91
YIPF4Q9BSR8 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.1□□□□□ -1.91
YIPF4Q9BSR8 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
YIPF4Q9BSR8 RNA5SP383-201ENST00000362934 120 ntBASIC3.09□□□□□ -1.91
YIPF4Q9BSR8 U3.8-201ENST00000363675 217 ntBASIC3.09□□□□□ -1.91
YIPF4Q9BSR8 Y_RNA.172-201ENST00000363765 102 ntBASIC3.09□□□□□ -1.91
YIPF4Q9BSR8 snoU2_19.4-201ENST00000364329 80 ntBASIC3.09□□□□□ -1.91
YIPF4Q9BSR8 SNORD50.2-201ENST00000365465 70 ntBASIC3.09□□□□□ -1.91
YIPF4Q9BSR8 SNORA72.4-201ENST00000384174 132 ntBASIC3.09□□□□□ -1.91
YIPF4Q9BSR8 Y_RNA.580-201ENST00000391004 95 ntBASIC3.09□□□□□ -1.91
YIPF4Q9BSR8 RNU6-1248P-201ENST00000391096 64 ntBASIC3.09□□□□□ -1.91
YIPF4Q9BSR8 AL139095.1-201ENST00000404326 391 ntBASIC3.09□□□□□ -1.91
YIPF4Q9BSR8 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.09□□□□□ -1.91
YIPF4Q9BSR8 SEPT7P4-201ENST00000437076 306 ntBASIC3.09□□□□□ -1.91
YIPF4Q9BSR8 AC104389.3-201ENST00000445629 235 ntBASIC3.09□□□□□ -1.91
YIPF4Q9BSR8 RPS29P2-201ENST00000479278 136 ntBASIC3.09□□□□□ -1.91
YIPF4Q9BSR8 AC021205.2-201ENST00000480069 347 ntBASIC3.09□□□□□ -1.91
YIPF4Q9BSR8 MIR449C-201ENST00000516047 92 ntBASIC3.09□□□□□ -1.91
YIPF4Q9BSR8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.09□□□□□ -1.91
YIPF4Q9BSR8 uc_338.1-201ENST00000612113 180 ntBASIC3.09□□□□□ -1.91
YIPF4Q9BSR8 AC013791.1-201ENST00000616619 62 ntBASIC3.09□□□□□ -1.91
YIPF4Q9BSR8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.09□□□□□ -1.91
YIPF4Q9BSR8 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
YIPF4Q9BSR8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
YIPF4Q9BSR8 AL365361.1-201ENST00000566942 3481 ntBASIC3.09□□□□□ -1.92
YIPF4Q9BSR8 CST9LP2-201ENST00000437612 320 ntBASIC3.08□□□□□ -1.92
YIPF4Q9BSR8 HMGN2P9-201ENST00000476875 229 ntBASIC3.08□□□□□ -1.92
YIPF4Q9BSR8 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.08□□□□□ -1.92
YIPF4Q9BSR8 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.08□□□□□ -1.92
YIPF4Q9BSR8 MIR4276-201ENST00000584832 70 ntBASIC3.08□□□□□ -1.92
YIPF4Q9BSR8 AL355297.2-201ENST00000604792 129 ntBASIC3.08□□□□□ -1.92
YIPF4Q9BSR8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
YIPF4Q9BSR8 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
YIPF4Q9BSR8 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
YIPF4Q9BSR8 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.07□□□□□ -1.92
YIPF4Q9BSR8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
YIPF4Q9BSR8 Y_RNA.75-201ENST00000362927 97 ntBASIC3.07□□□□□ -1.92
YIPF4Q9BSR8 Y_RNA.124-201ENST00000363339 93 ntBASIC3.07□□□□□ -1.92
YIPF4Q9BSR8 Y_RNA.182-201ENST00000363880 111 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 224.6 ms