Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 MTND4P28-201ENST00000426217 387 ntBASIC1.92□□□□□ -2.1
CMTM3Q96MX0 HMGN2P34-201ENST00000437647 269 ntBASIC1.92□□□□□ -2.1
CMTM3Q96MX0 AC099799.1-201ENST00000439809 192 ntBASIC1.92□□□□□ -2.1
CMTM3Q96MX0 UQCRBP2-201ENST00000447827 297 ntBASIC1.92□□□□□ -2.1
CMTM3Q96MX0 AC010409.1-201ENST00000487382 476 ntBASIC1.92□□□□□ -2.1
CMTM3Q96MX0 HMGB3P17-201ENST00000504195 649 ntBASIC1.92□□□□□ -2.1
CMTM3Q96MX0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.92□□□□□ -2.1
CMTM3Q96MX0 RNU6-107P-201ENST00000516643 102 ntBASIC1.92□□□□□ -2.1
CMTM3Q96MX0 MIR4319-201ENST00000577285 85 ntBASIC1.92□□□□□ -2.1
CMTM3Q96MX0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.91□□□□□ -2.1
CMTM3Q96MX0 RNA5SP138-201ENST00000365098 114 ntBASIC1.91□□□□□ -2.1
CMTM3Q96MX0 RNA5SP489-201ENST00000410986 109 ntBASIC1.91□□□□□ -2.1
CMTM3Q96MX0 ELOCP21-201ENST00000412558 336 ntBASIC1.91□□□□□ -2.1
CMTM3Q96MX0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.91□□□□□ -2.1
CMTM3Q96MX0 TOMM22P2-201ENST00000430735 237 ntBASIC1.91□□□□□ -2.1
CMTM3Q96MX0 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.91□□□□□ -2.1
CMTM3Q96MX0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.91□□□□□ -2.1
CMTM3Q96MX0 AC018634.1-201ENST00000437554 401 ntBASIC1.91□□□□□ -2.1
CMTM3Q96MX0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.91□□□□□ -2.1
CMTM3Q96MX0 AL021397.1-201ENST00000451806 248 ntBASIC1.91□□□□□ -2.1
CMTM3Q96MX0 AC105758.1-201ENST00000506038 399 ntBASIC1.91□□□□□ -2.1
CMTM3Q96MX0 RN7SKP132-201ENST00000516001 208 ntBASIC1.91□□□□□ -2.1
CMTM3Q96MX0 RNA5SP200-201ENST00000516360 103 ntBASIC1.91□□□□□ -2.1
CMTM3Q96MX0 AC021269.2-201ENST00000532318 330 ntBASIC1.91□□□□□ -2.1
CMTM3Q96MX0 AL357075.2-201ENST00000614906 189 ntBASIC1.91□□□□□ -2.1
CMTM3Q96MX0 SCARNA15.3-201ENST00000626315 122 ntBASIC1.91□□□□□ -2.1
CMTM3Q96MX0 SCARNA4.1-201ENST00000628597 123 ntBASIC1.91□□□□□ -2.1
CMTM3Q96MX0 AC010615.1-201ENST00000594254 1764 ntBASIC1.9□□□□□ -2.1
CMTM3Q96MX0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.9□□□□□ -2.11
CMTM3Q96MX0 RNU6-1301P-201ENST00000362724 104 ntBASIC1.9□□□□□ -2.11
CMTM3Q96MX0 Y_RNA.58-201ENST00000362807 102 ntBASIC1.9□□□□□ -2.11
CMTM3Q96MX0 Y_RNA.146-201ENST00000363549 102 ntBASIC1.9□□□□□ -2.11
CMTM3Q96MX0 Y_RNA.154-201ENST00000363624 102 ntBASIC1.9□□□□□ -2.11
CMTM3Q96MX0 Y_RNA.287-201ENST00000364853 94 ntBASIC1.9□□□□□ -2.11
CMTM3Q96MX0 RNY3P1-201ENST00000365085 102 ntBASIC1.9□□□□□ -2.11
CMTM3Q96MX0 RNY3-201ENST00000365484 102 ntBASIC1.9□□□□□ -2.11
CMTM3Q96MX0 RNU6-296P-201ENST00000384608 107 ntBASIC1.9□□□□□ -2.11
CMTM3Q96MX0 RNU6-417P-201ENST00000384712 107 ntBASIC1.9□□□□□ -2.11
CMTM3Q96MX0 MIR515-2-201ENST00000384883 83 ntBASIC1.9□□□□□ -2.11
CMTM3Q96MX0 MIR515-1-201ENST00000384884 83 ntBASIC1.9□□□□□ -2.11
CMTM3Q96MX0 AC245047.4-201ENST00000433189 144 ntBASIC1.9□□□□□ -2.11
CMTM3Q96MX0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.9□□□□□ -2.11
CMTM3Q96MX0 AC007677.1-201ENST00000445757 515 ntBASIC1.9□□□□□ -2.11
CMTM3Q96MX0 RNU6-699P-201ENST00000517081 110 ntBASIC1.9□□□□□ -2.11
CMTM3Q96MX0 AC084364.2-201ENST00000546924 395 ntBASIC1.9□□□□□ -2.11
CMTM3Q96MX0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.9□□□□□ -2.11
CMTM3Q96MX0 MIR4795-201ENST00000584182 89 ntBASIC1.9□□□□□ -2.11
CMTM3Q96MX0 AC012493.3-201ENST00000604494 112 ntBASIC1.9□□□□□ -2.11
CMTM3Q96MX0 AC116312.1-201ENST00000606841 314 ntBASIC1.9□□□□□ -2.11
CMTM3Q96MX0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.9□□□□□ -2.11
CMTM3Q96MX0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CMTM3Q96MX0 AC062016.1-201ENST00000355719 319 ntBASIC1.89□□□□□ -2.11
CMTM3Q96MX0 RNU6-1266P-201ENST00000362794 105 ntBASIC1.89□□□□□ -2.11
CMTM3Q96MX0 Y_RNA.314-201ENST00000365114 102 ntBASIC1.89□□□□□ -2.11
CMTM3Q96MX0 RNU6-1264P-201ENST00000383891 107 ntBASIC1.89□□□□□ -2.11
CMTM3Q96MX0 SNORA67.4-201ENST00000384688 142 ntBASIC1.89□□□□□ -2.11
CMTM3Q96MX0 MIR520A-201ENST00000384862 85 ntBASIC1.89□□□□□ -2.11
CMTM3Q96MX0 MIR634-201ENST00000385208 97 ntBASIC1.89□□□□□ -2.11
CMTM3Q96MX0 Y_RNA.605-201ENST00000410577 105 ntBASIC1.89□□□□□ -2.11
CMTM3Q96MX0 AF228730.4-201ENST00000421457 183 ntBASIC1.89□□□□□ -2.11
CMTM3Q96MX0 RPL31P63-201ENST00000422565 375 ntBASIC1.89□□□□□ -2.11
CMTM3Q96MX0 MRPS18CP6-201ENST00000423587 223 ntBASIC1.89□□□□□ -2.11
CMTM3Q96MX0 SNORA31.17-201ENST00000516953 127 ntBASIC1.89□□□□□ -2.11
CMTM3Q96MX0 RAB11AP2-201ENST00000545905 639 ntBASIC1.89□□□□□ -2.11
CMTM3Q96MX0 AC018448.1-201ENST00000552843 316 ntBASIC1.89□□□□□ -2.11
CMTM3Q96MX0 HSBP1P1-201ENST00000555205 166 ntBASIC1.89□□□□□ -2.11
CMTM3Q96MX0 MIR3935-201ENST00000583472 104 ntBASIC1.89□□□□□ -2.11
CMTM3Q96MX0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
CMTM3Q96MX0 SNORA72.2-201ENST00000365028 127 ntBASIC1.88□□□□□ -2.11
CMTM3Q96MX0 Y_RNA.463-201ENST00000384271 102 ntBASIC1.88□□□□□ -2.11
CMTM3Q96MX0 Y_RNA.498-201ENST00000384460 102 ntBASIC1.88□□□□□ -2.11
CMTM3Q96MX0 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.88□□□□□ -2.11
CMTM3Q96MX0 AC069257.2-201ENST00000441819 155 ntBASIC1.88□□□□□ -2.11
CMTM3Q96MX0 RPL23AP7-203ENST00000449021 469 ntBASIC1.88□□□□□ -2.11
CMTM3Q96MX0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.88□□□□□ -2.11
CMTM3Q96MX0 RNA5SP364-201ENST00000516938 78 ntBASIC1.88□□□□□ -2.11
CMTM3Q96MX0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.88□□□□□ -2.11
CMTM3Q96MX0 AC103810.8-201ENST00000607347 118 ntBASIC1.88□□□□□ -2.11
CMTM3Q96MX0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.88□□□□□ -2.11
CMTM3Q96MX0 MIR6132-201ENST00000622083 109 ntBASIC1.88□□□□□ -2.11
CMTM3Q96MX0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.88□□□□□ -2.11
CMTM3Q96MX0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CMTM3Q96MX0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.88□□□□□ -2.11
CMTM3Q96MX0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CMTM3Q96MX0 MIR410-201ENST00000362222 80 ntBASIC1.87□□□□□ -2.11
CMTM3Q96MX0 RNU4-79P-201ENST00000362764 141 ntBASIC1.87□□□□□ -2.11
CMTM3Q96MX0 RNA5SP68-201ENST00000363885 119 ntBASIC1.87□□□□□ -2.11
CMTM3Q96MX0 SUMO2P12-201ENST00000405924 140 ntBASIC1.87□□□□□ -2.11
CMTM3Q96MX0 SNORD12B-201ENST00000410433 91 ntBASIC1.87□□□□□ -2.11
CMTM3Q96MX0 RNA5SP338-201ENST00000410495 85 ntBASIC1.87□□□□□ -2.11
CMTM3Q96MX0 EBAG9P1-201ENST00000418955 543 ntBASIC1.87□□□□□ -2.11
CMTM3Q96MX0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.87□□□□□ -2.11
CMTM3Q96MX0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.87□□□□□ -2.11
CMTM3Q96MX0 RNU7-169P-201ENST00000459456 61 ntBASIC1.87□□□□□ -2.11
CMTM3Q96MX0 WWP1P1-201ENST00000466609 2769 ntBASIC1.87□□□□□ -2.11
CMTM3Q96MX0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.87□□□□□ -2.11
CMTM3Q96MX0 SNORA40.9-201ENST00000515895 93 ntBASIC1.87□□□□□ -2.11
CMTM3Q96MX0 Y_RNA.675-201ENST00000516389 149 ntBASIC1.87□□□□□ -2.11
CMTM3Q96MX0 AC024995.1-201ENST00000523014 93 ntBASIC1.87□□□□□ -2.11
CMTM3Q96MX0 GNAI2P1-201ENST00000541815 315 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 241.4 ms