Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 SNORA72.4-201ENST00000384174 132 ntBASIC3.56□□□□□ -1.84
TMEM40Q8WWA1 AL606845.1-201ENST00000404881 255 ntBASIC3.56□□□□□ -1.84
TMEM40Q8WWA1 RN7SKP284-201ENST00000411002 343 ntBASIC3.56□□□□□ -1.84
TMEM40Q8WWA1 AC002075.2-201ENST00000425207 252 ntBASIC3.56□□□□□ -1.84
TMEM40Q8WWA1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.56□□□□□ -1.84
TMEM40Q8WWA1 HSPE1P13-201ENST00000451143 297 ntBASIC3.56□□□□□ -1.84
TMEM40Q8WWA1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.56□□□□□ -1.84
TMEM40Q8WWA1 HSPE1P18-201ENST00000517602 280 ntBASIC3.56□□□□□ -1.84
TMEM40Q8WWA1 EIF4BP1-201ENST00000554881 351 ntBASIC3.56□□□□□ -1.84
TMEM40Q8WWA1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.56□□□□□ -1.84
TMEM40Q8WWA1 MIR4765-201ENST00000585007 77 ntBASIC3.56□□□□□ -1.84
TMEM40Q8WWA1 AC012640.5-201ENST00000623897 319 ntBASIC3.56□□□□□ -1.84
TMEM40Q8WWA1 U6.95-201ENST00000636931 70 ntBASIC3.56□□□□□ -1.84
TMEM40Q8WWA1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
TMEM40Q8WWA1 CEP170P1-201ENST00000502249 4587 ntBASIC3.56□□□□□ -1.84
TMEM40Q8WWA1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 FAM35DP-201ENST00000323387 2712 ntBASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 Y_RNA.229-201ENST00000364347 113 ntBASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 RNU6-1164P-201ENST00000364428 107 ntBASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 RNU6-1336P-201ENST00000383886 109 ntBASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 Y_RNA.393-201ENST00000383936 102 ntBASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 SNORD116-21-201ENST00000384507 92 ntBASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 MIR634-201ENST00000385208 97 ntBASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 AC004866.1-201ENST00000411748 78 ntBASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 RPS27P1-201ENST00000450552 247 ntBASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 RPL27AP5-201ENST00000469428 449 ntBASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 RNA5SP112-201ENST00000515937 99 ntBASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 SNORD59.2-201ENST00000516873 68 ntBASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 RNU1-117P-201ENST00000517041 158 ntBASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 RNU6-537P-201ENST00000517277 103 ntBASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 AL162274.2-201ENST00000614406 332 ntBASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 AC244205.2-202ENST00000635781 342 ntBASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
TMEM40Q8WWA1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 Y_RNA.111-201ENST00000363248 100 ntBASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 EIF4EP4-201ENST00000424916 578 ntBASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 AC009414.1-201ENST00000427200 443 ntBASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 ARF4P2-201ENST00000430209 526 ntBASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 SNORA59A-201ENST00000459326 152 ntBASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 Y_RNA.651-201ENST00000459380 103 ntBASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 RPL23AP67-201ENST00000465341 474 ntBASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 MIR2114-201ENST00000516645 80 ntBASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 RNU2-44P-201ENST00000516795 194 ntBASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 MIR2276-201ENST00000516886 89 ntBASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 AC107934.2-201ENST00000518653 310 ntBASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 AL031274.2-201ENST00000599419 203 ntBASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 uc_338.1-201ENST00000612113 180 ntBASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 AL391903.3-201ENST00000612158 163 ntBASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 AC068205.3-201ENST00000636385 468 ntBASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 GABRG2-229ENST00000641017 3628 ntBASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TMEM40Q8WWA1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 MIR422A-201ENST00000362286 90 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 SNORD87-201ENST00000364849 89 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 Y_RNA.388-201ENST00000383919 113 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 RNU6-32P-201ENST00000383948 107 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 RNU6-1083P-201ENST00000384022 107 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 RNU6-13P-201ENST00000384248 107 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 RNU6-12P-201ENST00000384604 107 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 RNU6-41P-201ENST00000384741 107 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 AL355497.1-201ENST00000406262 551 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 RN7SL330P-201ENST00000469709 307 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 RPL31P41-201ENST00000477967 372 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 Y_RNA.677-201ENST00000516401 85 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 RNU6-1061P-201ENST00000516530 99 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 AC133485.4-201ENST00000561835 220 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 AC138907.4-201ENST00000570107 226 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 AC103810.1-201ENST00000579873 453 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 AC008739.2-201ENST00000597006 317 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 RPL30P11-203ENST00000598995 310 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 AL670379.3-201ENST00000605040 251 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 AC110079.1-202ENST00000635213 138 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 Z82209.1-201ENST00000422141 2135 ntBASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TMEM40Q8WWA1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
TMEM40Q8WWA1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMEM40Q8WWA1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMEM40Q8WWA1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 260.4 ms