Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 Y_RNA.415-201ENST00000384012 112 ntBASIC3.03□□□□□ -1.92
KRT40Q6A162 RNU1-57P-201ENST00000384491 166 ntBASIC3.03□□□□□ -1.92
KRT40Q6A162 MIR764-201ENST00000390811 85 ntBASIC3.03□□□□□ -1.92
KRT40Q6A162 RNA5SP210-201ENST00000391034 120 ntBASIC3.03□□□□□ -1.92
KRT40Q6A162 SNORA46.1-201ENST00000391069 153 ntBASIC3.03□□□□□ -1.92
KRT40Q6A162 AL441985.1-201ENST00000457727 251 ntBASIC3.03□□□□□ -1.92
KRT40Q6A162 AC145146.1-201ENST00000496370 254 ntBASIC3.03□□□□□ -1.92
KRT40Q6A162 Y_RNA.676-201ENST00000516393 96 ntBASIC3.03□□□□□ -1.92
KRT40Q6A162 MIR4282-201ENST00000583613 67 ntBASIC3.03□□□□□ -1.92
KRT40Q6A162 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.03□□□□□ -1.92
KRT40Q6A162 AC004467.1-201ENST00000615678 330 ntBASIC3.03□□□□□ -1.92
KRT40Q6A162 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.03□□□□□ -1.92
KRT40Q6A162 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
KRT40Q6A162 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.03□□□□□ -1.92
KRT40Q6A162 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.02□□□□□ -1.93
KRT40Q6A162 SNORA25.1-201ENST00000362326 128 ntBASIC3.02□□□□□ -1.93
KRT40Q6A162 RNU1-62P-201ENST00000362599 164 ntBASIC3.02□□□□□ -1.93
KRT40Q6A162 RNU5F-3P-201ENST00000363767 117 ntBASIC3.02□□□□□ -1.93
KRT40Q6A162 RNU6-1210P-201ENST00000363775 107 ntBASIC3.02□□□□□ -1.93
KRT40Q6A162 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
KRT40Q6A162 Y_RNA.626-201ENST00000411288 95 ntBASIC3.02□□□□□ -1.93
KRT40Q6A162 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.02□□□□□ -1.93
KRT40Q6A162 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.02□□□□□ -1.93
KRT40Q6A162 POLR2KP2-201ENST00000438155 177 ntBASIC3.02□□□□□ -1.93
KRT40Q6A162 Y_RNA.644-201ENST00000459006 113 ntBASIC3.02□□□□□ -1.93
KRT40Q6A162 RPS27P26-201ENST00000494583 239 ntBASIC3.02□□□□□ -1.93
KRT40Q6A162 RPS29P21-201ENST00000496272 170 ntBASIC3.02□□□□□ -1.93
KRT40Q6A162 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.02□□□□□ -1.93
KRT40Q6A162 Y_RNA.674-201ENST00000516362 113 ntBASIC3.02□□□□□ -1.93
KRT40Q6A162 CYCSP23-201ENST00000519781 313 ntBASIC3.02□□□□□ -1.93
KRT40Q6A162 EIF4A1P12-201ENST00000551910 141 ntBASIC3.02□□□□□ -1.93
KRT40Q6A162 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.02□□□□□ -1.93
KRT40Q6A162 MIR3145-201ENST00000580727 82 ntBASIC3.02□□□□□ -1.93
KRT40Q6A162 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.02□□□□□ -1.93
KRT40Q6A162 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.02□□□□□ -1.93
KRT40Q6A162 AC006001.4-201ENST00000622243 395 ntBASIC3.02□□□□□ -1.93
KRT40Q6A162 AC002064.3-201ENST00000623448 346 ntBASIC3.02□□□□□ -1.93
KRT40Q6A162 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
KRT40Q6A162 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
KRT40Q6A162 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.01□□□□□ -1.93
KRT40Q6A162 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.01□□□□□ -1.93
KRT40Q6A162 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRT40Q6A162 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.01□□□□□ -1.93
KRT40Q6A162 snoU2_19.1-201ENST00000362361 80 ntBASIC3.01□□□□□ -1.93
KRT40Q6A162 RNU6-655P-201ENST00000362858 107 ntBASIC3.01□□□□□ -1.93
KRT40Q6A162 Y_RNA.82-201ENST00000363000 102 ntBASIC3.01□□□□□ -1.93
KRT40Q6A162 Y_RNA.92-201ENST00000363043 102 ntBASIC3.01□□□□□ -1.93
KRT40Q6A162 Y_RNA.180-201ENST00000363867 113 ntBASIC3.01□□□□□ -1.93
KRT40Q6A162 Y_RNA.235-201ENST00000364412 102 ntBASIC3.01□□□□□ -1.93
KRT40Q6A162 Y_RNA.306-201ENST00000365015 102 ntBASIC3.01□□□□□ -1.93
KRT40Q6A162 Y_RNA.312-201ENST00000365089 102 ntBASIC3.01□□□□□ -1.93
KRT40Q6A162 Y_RNA.322-201ENST00000365151 102 ntBASIC3.01□□□□□ -1.93
KRT40Q6A162 MIR592-201ENST00000384959 97 ntBASIC3.01□□□□□ -1.93
KRT40Q6A162 SNORA12-201ENST00000391162 147 ntBASIC3.01□□□□□ -1.93
KRT40Q6A162 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.01□□□□□ -1.93
KRT40Q6A162 AC005042.3-201ENST00000453230 174 ntBASIC3.01□□□□□ -1.93
KRT40Q6A162 Y_RNA.650-201ENST00000459002 102 ntBASIC3.01□□□□□ -1.93
KRT40Q6A162 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.01□□□□□ -1.93
KRT40Q6A162 RNA5SP282-201ENST00000516355 108 ntBASIC3.01□□□□□ -1.93
KRT40Q6A162 SNORA27.4-201ENST00000516650 95 ntBASIC3.01□□□□□ -1.93
KRT40Q6A162 Y_RNA.777-201ENST00000516982 102 ntBASIC3.01□□□□□ -1.93
KRT40Q6A162 RNU6-56P-201ENST00000516986 93 ntBASIC3.01□□□□□ -1.93
KRT40Q6A162 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.01□□□□□ -1.93
KRT40Q6A162 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.01□□□□□ -1.93
KRT40Q6A162 Y_RNA.771-201ENST00000598668 102 ntBASIC3.01□□□□□ -1.93
KRT40Q6A162 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.01□□□□□ -1.93
KRT40Q6A162 Y_RNA.789-201ENST00000622480 102 ntBASIC3.01□□□□□ -1.93
KRT40Q6A162 ZNF658B-202ENST00000615961 3375 ntBASIC3□□□□□ -1.93
KRT40Q6A162 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
KRT40Q6A162 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3□□□□□ -1.93
KRT40Q6A162 RNU6-454P-201ENST00000364292 107 ntBASIC3□□□□□ -1.93
KRT40Q6A162 SNORD114-30-201ENST00000364448 72 ntBASIC3□□□□□ -1.93
KRT40Q6A162 Y_RNA.292-201ENST00000364904 97 ntBASIC3□□□□□ -1.93
KRT40Q6A162 RNU6-662P-201ENST00000384253 104 ntBASIC3□□□□□ -1.93
KRT40Q6A162 RNU6-886P-201ENST00000384319 105 ntBASIC3□□□□□ -1.93
KRT40Q6A162 Y_RNA.498-201ENST00000384460 102 ntBASIC3□□□□□ -1.93
KRT40Q6A162 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3□□□□□ -1.93
KRT40Q6A162 RPL23AP36-201ENST00000413895 458 ntBASIC3□□□□□ -1.93
KRT40Q6A162 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3□□□□□ -1.93
KRT40Q6A162 AC027124.2-201ENST00000428249 105 ntBASIC3□□□□□ -1.93
KRT40Q6A162 AC004386.2-201ENST00000441858 148 ntBASIC3□□□□□ -1.93
KRT40Q6A162 AL138752.1-201ENST00000452964 351 ntBASIC3□□□□□ -1.93
KRT40Q6A162 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3□□□□□ -1.93
KRT40Q6A162 SNORD2.1-201ENST00000458762 69 ntBASIC3□□□□□ -1.93
KRT40Q6A162 AC107393.1-201ENST00000512403 346 ntBASIC3□□□□□ -1.93
KRT40Q6A162 AC024405.2-202ENST00000532731 184 ntBASIC3□□□□□ -1.93
KRT40Q6A162 SNRPGP20-201ENST00000604477 205 ntBASIC3□□□□□ -1.93
KRT40Q6A162 AC025754.2-201ENST00000606491 432 ntBASIC3□□□□□ -1.93
KRT40Q6A162 AC037487.3-201ENST00000606668 112 ntBASIC3□□□□□ -1.93
KRT40Q6A162 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3□□□□□ -1.93
KRT40Q6A162 uc_338.14-201ENST00000613162 166 ntBASIC3□□□□□ -1.93
KRT40Q6A162 AC005562.2-201ENST00000618264 111 ntBASIC3□□□□□ -1.93
KRT40Q6A162 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
KRT40Q6A162 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
KRT40Q6A162 RNA5SP289-201ENST00000362332 137 ntBASIC2.99□□□□□ -1.93
KRT40Q6A162 RNU4-80P-201ENST00000363200 141 ntBASIC2.99□□□□□ -1.93
KRT40Q6A162 U3.9-201ENST00000363823 204 ntBASIC2.99□□□□□ -1.93
KRT40Q6A162 Y_RNA.217-201ENST00000364214 105 ntBASIC2.99□□□□□ -1.93
KRT40Q6A162 SNORD87-201ENST00000364849 89 ntBASIC2.99□□□□□ -1.93
KRT40Q6A162 U8.9-201ENST00000365667 134 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms