Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
LRRC53A6NM62 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
LRRC53A6NM62 SUMO2P12-201ENST00000405924 140 ntBASIC2.1□□□□□ -2.07
LRRC53A6NM62 Y_RNA.595-201ENST00000410403 105 ntBASIC2.1□□□□□ -2.07
LRRC53A6NM62 AC018865.2-201ENST00000423631 129 ntBASIC2.1□□□□□ -2.07
LRRC53A6NM62 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.1□□□□□ -2.07
LRRC53A6NM62 AL357134.1-201ENST00000445848 426 ntBASIC2.1□□□□□ -2.07
LRRC53A6NM62 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.1□□□□□ -2.07
LRRC53A6NM62 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.1□□□□□ -2.07
LRRC53A6NM62 MIR1273D-201ENST00000577266 86 ntBASIC2.1□□□□□ -2.07
LRRC53A6NM62 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.1□□□□□ -2.07
LRRC53A6NM62 AC092447.9-201ENST00000603395 144 ntBASIC2.1□□□□□ -2.07
LRRC53A6NM62 AC090971.5-201ENST00000621102 293 ntBASIC2.1□□□□□ -2.07
LRRC53A6NM62 uc_338.22-201ENST00000622722 187 ntBASIC2.1□□□□□ -2.07
LRRC53A6NM62 AL159152.1-201ENST00000635019 2587 ntBASIC2.09□□□□□ -2.07
LRRC53A6NM62 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
LRRC53A6NM62 Y_RNA.395-201ENST00000383945 109 ntBASIC2.09□□□□□ -2.07
LRRC53A6NM62 RNU6-1235P-201ENST00000384559 107 ntBASIC2.09□□□□□ -2.07
LRRC53A6NM62 RNA5SP465-201ENST00000391195 109 ntBASIC2.09□□□□□ -2.07
LRRC53A6NM62 AC096920.1-201ENST00000423991 241 ntBASIC2.09□□□□□ -2.07
LRRC53A6NM62 AL445646.1-201ENST00000431784 216 ntBASIC2.09□□□□□ -2.07
LRRC53A6NM62 AL137792.2-201ENST00000443484 235 ntBASIC2.09□□□□□ -2.07
LRRC53A6NM62 Y_RNA.639-201ENST00000458981 102 ntBASIC2.09□□□□□ -2.07
LRRC53A6NM62 RNU6-498P-201ENST00000459468 107 ntBASIC2.09□□□□□ -2.07
LRRC53A6NM62 RN7SKP49-201ENST00000516675 260 ntBASIC2.09□□□□□ -2.07
LRRC53A6NM62 RNU6-856P-201ENST00000516959 98 ntBASIC2.09□□□□□ -2.07
LRRC53A6NM62 MIR2355-201ENST00000517199 87 ntBASIC2.09□□□□□ -2.07
LRRC53A6NM62 AC091144.1-201ENST00000519573 138 ntBASIC2.09□□□□□ -2.07
LRRC53A6NM62 AP002770.2-201ENST00000543613 532 ntBASIC2.09□□□□□ -2.07
LRRC53A6NM62 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.09□□□□□ -2.07
LRRC53A6NM62 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.09□□□□□ -2.07
LRRC53A6NM62 U2.1-201ENST00000618978 145 ntBASIC2.09□□□□□ -2.07
LRRC53A6NM62 MIR6852-201ENST00000621699 66 ntBASIC2.09□□□□□ -2.07
LRRC53A6NM62 AC022513.1-201ENST00000624512 117 ntBASIC2.09□□□□□ -2.07
LRRC53A6NM62 MIR219B-201ENST00000637023 88 ntBASIC2.09□□□□□ -2.07
LRRC53A6NM62 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.09□□□□□ -2.07
LRRC53A6NM62 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.09□□□□□ -2.08
LRRC53A6NM62 ZNF658B-202ENST00000615961 3375 ntBASIC2.09□□□□□ -2.08
LRRC53A6NM62 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LRRC53A6NM62 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.08□□□□□ -2.08
LRRC53A6NM62 U3.8-201ENST00000363675 217 ntBASIC2.08□□□□□ -2.08
LRRC53A6NM62 RNU6-708P-201ENST00000384217 107 ntBASIC2.08□□□□□ -2.08
LRRC53A6NM62 RNU6-308P-201ENST00000390957 107 ntBASIC2.08□□□□□ -2.08
LRRC53A6NM62 U3.40-201ENST00000408706 208 ntBASIC2.08□□□□□ -2.08
LRRC53A6NM62 RNU2-20P-201ENST00000410425 191 ntBASIC2.08□□□□□ -2.08
LRRC53A6NM62 SNORD12B-201ENST00000410433 91 ntBASIC2.08□□□□□ -2.08
LRRC53A6NM62 RNU6-57P-201ENST00000411348 103 ntBASIC2.08□□□□□ -2.08
LRRC53A6NM62 Z98742.3-201ENST00000418637 326 ntBASIC2.08□□□□□ -2.08
LRRC53A6NM62 AC060773.1-201ENST00000421698 310 ntBASIC2.08□□□□□ -2.08
LRRC53A6NM62 AC008413.1-201ENST00000511864 177 ntBASIC2.08□□□□□ -2.08
LRRC53A6NM62 RNU2-34P-201ENST00000516534 121 ntBASIC2.08□□□□□ -2.08
LRRC53A6NM62 RNU6-107P-201ENST00000516643 102 ntBASIC2.08□□□□□ -2.08
LRRC53A6NM62 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.08□□□□□ -2.08
LRRC53A6NM62 AC006600.1-201ENST00000572529 153 ntBASIC2.08□□□□□ -2.08
LRRC53A6NM62 MIR4287-201ENST00000579398 78 ntBASIC2.08□□□□□ -2.08
LRRC53A6NM62 AC083806.3-201ENST00000614016 455 ntBASIC2.08□□□□□ -2.08
LRRC53A6NM62 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.08□□□□□ -2.08
LRRC53A6NM62 snoZ196.1-201ENST00000625269 89 ntBASIC2.08□□□□□ -2.08
LRRC53A6NM62 MIR4272-201ENST00000635924 64 ntBASIC2.08□□□□□ -2.08
LRRC53A6NM62 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.08□□□□□ -2.08
LRRC53A6NM62 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LRRC53A6NM62 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LRRC53A6NM62 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
LRRC53A6NM62 Y_RNA.31-201ENST00000362574 102 ntBASIC2.07□□□□□ -2.08
LRRC53A6NM62 RNA5SP276-201ENST00000362580 94 ntBASIC2.07□□□□□ -2.08
LRRC53A6NM62 Y_RNA.112-201ENST00000363250 102 ntBASIC2.07□□□□□ -2.08
LRRC53A6NM62 RNY1P14-201ENST00000384426 108 ntBASIC2.07□□□□□ -2.08
LRRC53A6NM62 Y_RNA.500-201ENST00000384466 111 ntBASIC2.07□□□□□ -2.08
LRRC53A6NM62 MIR17-201ENST00000385012 84 ntBASIC2.07□□□□□ -2.08
LRRC53A6NM62 RN7SKP223-201ENST00000410582 62 ntBASIC2.07□□□□□ -2.08
LRRC53A6NM62 ELOCP21-201ENST00000412558 336 ntBASIC2.07□□□□□ -2.08
LRRC53A6NM62 RPS20P15-201ENST00000412792 311 ntBASIC2.07□□□□□ -2.08
LRRC53A6NM62 AL135786.1-201ENST00000415892 214 ntBASIC2.07□□□□□ -2.08
LRRC53A6NM62 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LRRC53A6NM62 UQCRBP2-201ENST00000447827 297 ntBASIC2.07□□□□□ -2.08
LRRC53A6NM62 AC074290.1-201ENST00000448883 135 ntBASIC2.07□□□□□ -2.08
LRRC53A6NM62 PCNPP5-201ENST00000452246 481 ntBASIC2.07□□□□□ -2.08
LRRC53A6NM62 NDUFB4P10-201ENST00000452541 359 ntBASIC2.07□□□□□ -2.08
LRRC53A6NM62 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.07□□□□□ -2.08
LRRC53A6NM62 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.07□□□□□ -2.08
LRRC53A6NM62 RNU4-77P-201ENST00000516692 156 ntBASIC2.07□□□□□ -2.08
LRRC53A6NM62 MIR514B-201ENST00000516774 80 ntBASIC2.07□□□□□ -2.08
LRRC53A6NM62 AL442163.3-201ENST00000554110 156 ntBASIC2.07□□□□□ -2.08
LRRC53A6NM62 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.07□□□□□ -2.08
LRRC53A6NM62 AC006157.1-201ENST00000611750 366 ntBASIC2.07□□□□□ -2.08
LRRC53A6NM62 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
LRRC53A6NM62 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.07□□□□□ -2.08
LRRC53A6NM62 Y_RNA.80-201ENST00000362996 102 ntBASIC2.06□□□□□ -2.08
LRRC53A6NM62 Y_RNA.138-201ENST00000363462 102 ntBASIC2.06□□□□□ -2.08
LRRC53A6NM62 RNU6-474P-201ENST00000384243 107 ntBASIC2.06□□□□□ -2.08
LRRC53A6NM62 Y_RNA.485-201ENST00000384395 102 ntBASIC2.06□□□□□ -2.08
LRRC53A6NM62 MIR628-201ENST00000385229 95 ntBASIC2.06□□□□□ -2.08
LRRC53A6NM62 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LRRC53A6NM62 SNORA3.2-201ENST00000408221 125 ntBASIC2.06□□□□□ -2.08
LRRC53A6NM62 RNA5SP489-201ENST00000410986 109 ntBASIC2.06□□□□□ -2.08
LRRC53A6NM62 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.06□□□□□ -2.08
LRRC53A6NM62 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.06□□□□□ -2.08
LRRC53A6NM62 RPS27P21-201ENST00000486977 252 ntBASIC2.06□□□□□ -2.08
LRRC53A6NM62 RN7SL274P-201ENST00000492268 272 ntBASIC2.06□□□□□ -2.08
LRRC53A6NM62 RNU6-1041P-201ENST00000516254 102 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms