Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC20.74■□□□□ 0.91
Uspl1Q3ULM6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uspl1Q3ULM6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Uspl1Q3ULM6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uspl1Q3ULM6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uspl1Q3ULM6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uspl1Q3ULM6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uspl1Q3ULM6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Uspl1Q3ULM6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uspl1Q3ULM6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uspl1Q3ULM6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uspl1Q3ULM6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uspl1Q3ULM6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC20.73■□□□□ 0.91
Uspl1Q3ULM6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uspl1Q3ULM6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uspl1Q3ULM6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC20.72■□□□□ 0.91
Uspl1Q3ULM6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Uspl1Q3ULM6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Uspl1Q3ULM6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Uspl1Q3ULM6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC20.72■□□□□ 0.91
Uspl1Q3ULM6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.72■□□□□ 0.91
Uspl1Q3ULM6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.72■□□□□ 0.91
Uspl1Q3ULM6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Uspl1Q3ULM6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Uspl1Q3ULM6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Uspl1Q3ULM6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Uspl1Q3ULM6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Uspl1Q3ULM6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Uspl1Q3ULM6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Uspl1Q3ULM6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Uspl1Q3ULM6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Uspl1Q3ULM6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Uspl1Q3ULM6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.71■□□□□ 0.91
Uspl1Q3ULM6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.71■□□□□ 0.91
Uspl1Q3ULM6 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.71■□□□□ 0.91
Uspl1Q3ULM6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Uspl1Q3ULM6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Uspl1Q3ULM6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Uspl1Q3ULM6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Uspl1Q3ULM6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC20.71■□□□□ 0.91
Uspl1Q3ULM6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Uspl1Q3ULM6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Uspl1Q3ULM6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Uspl1Q3ULM6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Uspl1Q3ULM6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Uspl1Q3ULM6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Uspl1Q3ULM6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Uspl1Q3ULM6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Uspl1Q3ULM6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Uspl1Q3ULM6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Uspl1Q3ULM6 Gm4459-201ENSMUST00000118750 468 ntBASIC20.7■□□□□ 0.9
Uspl1Q3ULM6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.7■□□□□ 0.9
Uspl1Q3ULM6 Gm27459-201ENSMUST00000184860 107 ntBASIC20.7■□□□□ 0.9
Uspl1Q3ULM6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.7■□□□□ 0.9
Uspl1Q3ULM6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Uspl1Q3ULM6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Uspl1Q3ULM6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Uspl1Q3ULM6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Uspl1Q3ULM6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Uspl1Q3ULM6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Uspl1Q3ULM6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gm8825-201ENSMUST00000182565 998 ntBASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gm4518-201ENSMUST00000182638 718 ntBASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Uspl1Q3ULM6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms