Protein–RNA interactions for Protein: A0A0G2JDV4

Igkv5-39, Immunoglobulin kappa variable 5-39 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-39A0A0G2JDV4 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.04■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.04■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Gm27525-201ENSMUST00000184465 107 ntBASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Gm7222-201ENSMUST00000117512 906 ntBASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Gm15590-201ENSMUST00000078419 552 ntBASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
Igkv5-39A0A0G2JDV4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Igkv5-39A0A0G2JDV4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16■□□□□ 0.15
Igkv5-39A0A0G2JDV4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 202.1 ms