Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC018555.1-201ENST00000567548 1980 ntBASIC3.9□□□□□ -1.79
PCDHB11Q9Y5F2 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PCDHB11Q9Y5F2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PCDHB11Q9Y5F2 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHB11Q9Y5F2 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PCDHB11Q9Y5F2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHB11Q9Y5F2 RNU1-22P-201ENST00000363334 158 ntBASIC3.89□□□□□ -1.79
PCDHB11Q9Y5F2 Y_RNA.333-201ENST00000365274 102 ntBASIC3.89□□□□□ -1.79
PCDHB11Q9Y5F2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PCDHB11Q9Y5F2 RNA5SP89-201ENST00000410300 108 ntBASIC3.89□□□□□ -1.79
PCDHB11Q9Y5F2 DBIP2-201ENST00000419076 262 ntBASIC3.89□□□□□ -1.79
PCDHB11Q9Y5F2 Y_RNA.651-201ENST00000459380 103 ntBASIC3.89□□□□□ -1.79
PCDHB11Q9Y5F2 RAC1P2-201ENST00000511164 579 ntBASIC3.89□□□□□ -1.79
PCDHB11Q9Y5F2 RNU6-168P-201ENST00000516189 101 ntBASIC3.89□□□□□ -1.79
PCDHB11Q9Y5F2 SNORA72.7-201ENST00000516349 94 ntBASIC3.89□□□□□ -1.79
PCDHB11Q9Y5F2 RNU6-126P-201ENST00000516685 103 ntBASIC3.89□□□□□ -1.79
PCDHB11Q9Y5F2 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.89□□□□□ -1.79
PCDHB11Q9Y5F2 MIR6868-201ENST00000611215 58 ntBASIC3.89□□□□□ -1.79
PCDHB11Q9Y5F2 AL121890.5-201ENST00000620848 304 ntBASIC3.89□□□□□ -1.79
PCDHB11Q9Y5F2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHB11Q9Y5F2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.89□□□□□ -1.79
PCDHB11Q9Y5F2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 SNORA71.3-201ENST00000362582 128 ntBASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 RNU1-72P-201ENST00000362976 153 ntBASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 Y_RNA.111-201ENST00000363248 100 ntBASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 RNU6-525P-201ENST00000363685 104 ntBASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 Y_RNA.796-201ENST00000364268 102 ntBASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 RNU6-1164P-201ENST00000364428 107 ntBASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 RNU6-309P-201ENST00000364573 106 ntBASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 Y_RNA.799-201ENST00000364992 102 ntBASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 MIR562-201ENST00000384894 95 ntBASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 RNA5SP354-201ENST00000391247 136 ntBASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 RPL23AP83-201ENST00000434984 473 ntBASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 RPL21P10-201ENST00000463521 490 ntBASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 AC097462.1-201ENST00000514125 324 ntBASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 RNU6-586P-201ENST00000517265 104 ntBASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 MIR4662B-201ENST00000579498 81 ntBASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 SNORA51-201ENST00000606420 132 ntBASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 AC039056.2-201ENST00000622261 511 ntBASIC3.88□□□□□ -1.79
PCDHB11Q9Y5F2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.87□□□□□ -1.79
PCDHB11Q9Y5F2 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHB11Q9Y5F2 RNU6-1209P-201ENST00000363655 107 ntBASIC3.87□□□□□ -1.79
PCDHB11Q9Y5F2 RNU6-1138P-201ENST00000365359 106 ntBASIC3.87□□□□□ -1.79
PCDHB11Q9Y5F2 MIRLET7F2-201ENST00000385277 83 ntBASIC3.87□□□□□ -1.79
PCDHB11Q9Y5F2 AL500522.2-201ENST00000448562 343 ntBASIC3.87□□□□□ -1.79
PCDHB11Q9Y5F2 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDHB11Q9Y5F2 RN7SKP19-201ENST00000516016 252 ntBASIC3.87□□□□□ -1.79
PCDHB11Q9Y5F2 RNU6-781P-201ENST00000516377 101 ntBASIC3.87□□□□□ -1.79
PCDHB11Q9Y5F2 CYCSP30-201ENST00000546447 172 ntBASIC3.87□□□□□ -1.79
PCDHB11Q9Y5F2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PCDHB11Q9Y5F2 AC090115.4-201ENST00000609970 188 ntBASIC3.87□□□□□ -1.79
PCDHB11Q9Y5F2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PCDHB11Q9Y5F2 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.87□□□□□ -1.79
PCDHB11Q9Y5F2 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHB11Q9Y5F2 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.87□□□□□ -1.79
PCDHB11Q9Y5F2 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHB11Q9Y5F2 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 LINC02471-203ENST00000641941 4752 ntBASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 Y_RNA.52-201ENST00000362760 96 ntBASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 RNU6-508P-201ENST00000363231 103 ntBASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 RNU6-438P-201ENST00000365561 103 ntBASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 RNU6-880P-201ENST00000384526 107 ntBASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 MIR624-201ENST00000385217 97 ntBASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 AC009414.1-201ENST00000427200 443 ntBASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 SNRPGP3-201ENST00000469405 227 ntBASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 SCARNA17.1-201ENST00000516211 143 ntBASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 SCARNA17.2-201ENST00000516334 143 ntBASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 RNU7-149P-201ENST00000516739 59 ntBASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 MIR3117-201ENST00000584034 78 ntBASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 MIR4438-201ENST00000585271 93 ntBASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 AC019176.2-201ENST00000611579 315 ntBASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 SCARNA17.4-201ENST00000614296 143 ntBASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 Pinc.1-201ENST00000616452 154 ntBASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.86□□□□□ -1.79
PCDHB11Q9Y5F2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHB11Q9Y5F2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHB11Q9Y5F2 SNORA63.1-201ENST00000362493 131 ntBASIC3.85□□□□□ -1.79
PCDHB11Q9Y5F2 RNA5SP97-201ENST00000365006 84 ntBASIC3.85□□□□□ -1.79
PCDHB11Q9Y5F2 Y_RNA.346-201ENST00000365385 112 ntBASIC3.85□□□□□ -1.79
PCDHB11Q9Y5F2 MIR891A-201ENST00000401237 79 ntBASIC3.85□□□□□ -1.79
PCDHB11Q9Y5F2 RNA5SP127-201ENST00000411051 133 ntBASIC3.85□□□□□ -1.79
PCDHB11Q9Y5F2 OR9P1P-201ENST00000496431 281 ntBASIC3.85□□□□□ -1.79
PCDHB11Q9Y5F2 SNORA18.4-201ENST00000516440 124 ntBASIC3.85□□□□□ -1.79
PCDHB11Q9Y5F2 AC011604.1-201ENST00000545978 196 ntBASIC3.85□□□□□ -1.79
PCDHB11Q9Y5F2 AL365205.2-201ENST00000594586 68 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 211.9 ms