Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 HMGN1P7-201ENST00000491722 313 ntBASIC0.82□□□□□ -2.28
BPIFA3Q9BQP9 AF186996.7-201ENST00000492781 209 ntBASIC0.82□□□□□ -2.28
BPIFA3Q9BQP9 AC105758.1-201ENST00000506038 399 ntBASIC0.82□□□□□ -2.28
BPIFA3Q9BQP9 RNU7-99P-201ENST00000516271 62 ntBASIC0.82□□□□□ -2.28
BPIFA3Q9BQP9 RNU6-1198P-201ENST00000516904 67 ntBASIC0.82□□□□□ -2.28
BPIFA3Q9BQP9 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.82□□□□□ -2.28
BPIFA3Q9BQP9 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
BPIFA3Q9BQP9 MTND1P24-201ENST00000552175 861 ntBASIC0.82□□□□□ -2.28
BPIFA3Q9BQP9 SNORD11B-201ENST00000607707 90 ntBASIC0.82□□□□□ -2.28
BPIFA3Q9BQP9 RMST_3.1-201ENST00000611651 109 ntBASIC0.82□□□□□ -2.28
BPIFA3Q9BQP9 AL354950.2-201ENST00000617939 290 ntBASIC0.82□□□□□ -2.28
BPIFA3Q9BQP9 HSBP1P2-201ENST00000299671 229 ntBASIC0.81□□□□□ -2.28
BPIFA3Q9BQP9 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.81□□□□□ -2.28
BPIFA3Q9BQP9 RNU6-505P-201ENST00000384427 107 ntBASIC0.81□□□□□ -2.28
BPIFA3Q9BQP9 MIR660-201ENST00000385235 97 ntBASIC0.81□□□□□ -2.28
BPIFA3Q9BQP9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.81□□□□□ -2.28
BPIFA3Q9BQP9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.81□□□□□ -2.28
BPIFA3Q9BQP9 AL359672.1-201ENST00000442302 409 ntBASIC0.81□□□□□ -2.28
BPIFA3Q9BQP9 RPS4XP11-201ENST00000446897 772 ntBASIC0.81□□□□□ -2.28
BPIFA3Q9BQP9 SNORD79.1-201ENST00000516069 84 ntBASIC0.81□□□□□ -2.28
BPIFA3Q9BQP9 ACA64.5-201ENST00000516207 127 ntBASIC0.81□□□□□ -2.28
BPIFA3Q9BQP9 MTND1P35-201ENST00000526739 508 ntBASIC0.81□□□□□ -2.28
BPIFA3Q9BQP9 CPDP1-201ENST00000579660 283 ntBASIC0.81□□□□□ -2.28
BPIFA3Q9BQP9 MIR3908-201ENST00000579798 126 ntBASIC0.81□□□□□ -2.28
BPIFA3Q9BQP9 AC008088.1-201ENST00000580993 280 ntBASIC0.81□□□□□ -2.28
BPIFA3Q9BQP9 AC022432.1-201ENST00000595739 310 ntBASIC0.81□□□□□ -2.28
BPIFA3Q9BQP9 U6.73-201ENST00000619194 103 ntBASIC0.81□□□□□ -2.28
BPIFA3Q9BQP9 ZNF204P-201ENST00000416749 2397 ntBASIC0.81□□□□□ -2.28
BPIFA3Q9BQP9 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.8□□□□□ -2.28
BPIFA3Q9BQP9 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.8□□□□□ -2.28
BPIFA3Q9BQP9 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.8□□□□□ -2.28
BPIFA3Q9BQP9 AC048334.1-201ENST00000477975 159 ntBASIC0.8□□□□□ -2.28
BPIFA3Q9BQP9 HMGB1P29-201ENST00000505659 499 ntBASIC0.8□□□□□ -2.28
BPIFA3Q9BQP9 RNA5SP168-201ENST00000516642 112 ntBASIC0.8□□□□□ -2.28
BPIFA3Q9BQP9 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.8□□□□□ -2.28
BPIFA3Q9BQP9 AL157687.1-201ENST00000554853 619 ntBASIC0.8□□□□□ -2.28
BPIFA3Q9BQP9 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.8□□□□□ -2.28
BPIFA3Q9BQP9 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.8□□□□□ -2.28
BPIFA3Q9BQP9 SNORA28-201ENST00000606769 126 ntBASIC0.8□□□□□ -2.28
BPIFA3Q9BQP9 AC091931.1-201ENST00000623488 728 ntBASIC0.8□□□□□ -2.28
BPIFA3Q9BQP9 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
BPIFA3Q9BQP9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.8□□□□□ -2.28
BPIFA3Q9BQP9 SNORD115-8-201ENST00000363856 82 ntBASIC0.79□□□□□ -2.28
BPIFA3Q9BQP9 SNORD115-38-201ENST00000365037 82 ntBASIC0.79□□□□□ -2.28
BPIFA3Q9BQP9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.79□□□□□ -2.28
BPIFA3Q9BQP9 MTND5P15-201ENST00000434246 349 ntBASIC0.79□□□□□ -2.28
BPIFA3Q9BQP9 AL445567.1-201ENST00000439121 144 ntBASIC0.79□□□□□ -2.28
BPIFA3Q9BQP9 AL031667.1-201ENST00000440222 725 ntBASIC0.79□□□□□ -2.28
BPIFA3Q9BQP9 BET1P1-201ENST00000482276 359 ntBASIC0.79□□□□□ -2.28
BPIFA3Q9BQP9 RPL23AP75-201ENST00000491601 451 ntBASIC0.79□□□□□ -2.28
BPIFA3Q9BQP9 RNU6-415P-201ENST00000516252 97 ntBASIC0.79□□□□□ -2.28
BPIFA3Q9BQP9 RNU6-922P-201ENST00000516753 99 ntBASIC0.79□□□□□ -2.28
BPIFA3Q9BQP9 AC136628.3-201ENST00000521868 290 ntBASIC0.79□□□□□ -2.28
BPIFA3Q9BQP9 AC104576.1-201ENST00000524225 88 ntBASIC0.79□□□□□ -2.28
BPIFA3Q9BQP9 AC025423.5-201ENST00000550230 219 ntBASIC0.79□□□□□ -2.28
BPIFA3Q9BQP9 AC090049.2-201ENST00000550377 109 ntBASIC0.79□□□□□ -2.28
BPIFA3Q9BQP9 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.79□□□□□ -2.28
BPIFA3Q9BQP9 AC040904.1-201ENST00000590850 223 ntBASIC0.79□□□□□ -2.28
BPIFA3Q9BQP9 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.79□□□□□ -2.28
BPIFA3Q9BQP9 MIR373-201ENST00000362273 69 ntBASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 U3.8-201ENST00000363675 217 ntBASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 RNU6-214P-201ENST00000384130 107 ntBASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 SNORA80D-201ENST00000384488 135 ntBASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 MIR608-201ENST00000384820 100 ntBASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 RNU6-1158P-201ENST00000391167 107 ntBASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 MIR1185-2-201ENST00000408687 86 ntBASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 RNU6-1186P-201ENST00000410429 97 ntBASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 AC114482.1-201ENST00000418010 247 ntBASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 AC073464.1-201ENST00000429823 534 ntBASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 MTCO1P29-201ENST00000496868 288 ntBASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 PDCD5P2-201ENST00000507570 312 ntBASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 RNU6-322P-201ENST00000516010 103 ntBASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 RNU7-128P-201ENST00000517247 62 ntBASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 AL590705.4-201ENST00000532209 134 ntBASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 AC100830.2-201ENST00000581636 240 ntBASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 AL357312.1-201ENST00000603879 298 ntBASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 AL357078.3-201ENST00000607528 618 ntBASIC0.78□□□□□ -2.28
BPIFA3Q9BQP9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
BPIFA3Q9BQP9 RNU6-1266P-201ENST00000362794 105 ntBASIC0.77□□□□□ -2.29
BPIFA3Q9BQP9 RNU6-199P-201ENST00000362954 107 ntBASIC0.77□□□□□ -2.29
BPIFA3Q9BQP9 Y_RNA.124-201ENST00000363339 93 ntBASIC0.77□□□□□ -2.29
BPIFA3Q9BQP9 RNY3P9-201ENST00000384727 106 ntBASIC0.77□□□□□ -2.29
BPIFA3Q9BQP9 RNA5SP504-201ENST00000410676 117 ntBASIC0.77□□□□□ -2.29
BPIFA3Q9BQP9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.77□□□□□ -2.29
BPIFA3Q9BQP9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.77□□□□□ -2.29
BPIFA3Q9BQP9 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.77□□□□□ -2.29
BPIFA3Q9BQP9 AC004941.2-201ENST00000427009 228 ntBASIC0.77□□□□□ -2.29
BPIFA3Q9BQP9 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.77□□□□□ -2.29
BPIFA3Q9BQP9 AC005002.2-201ENST00000438228 269 ntBASIC0.77□□□□□ -2.29
BPIFA3Q9BQP9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.77□□□□□ -2.29
BPIFA3Q9BQP9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.77□□□□□ -2.29
BPIFA3Q9BQP9 Y_RNA.638-201ENST00000459374 113 ntBASIC0.77□□□□□ -2.29
BPIFA3Q9BQP9 SNORD124-201ENST00000459577 104 ntBASIC0.77□□□□□ -2.29
BPIFA3Q9BQP9 AC091885.1-201ENST00000506658 268 ntBASIC0.77□□□□□ -2.29
BPIFA3Q9BQP9 RNU6-113P-201ENST00000516653 101 ntBASIC0.77□□□□□ -2.29
BPIFA3Q9BQP9 MTND1P5-201ENST00000517906 940 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 607.8 ms