Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.33□□□□□ -2.04
PKP4Q99569 SNORD127-201ENST00000458892 86 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 RNU6-1132P-201ENST00000459214 107 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.33□□□□□ -2.04
PKP4Q99569 RNU6-58P-201ENST00000517143 103 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 CYCSP26-201ENST00000534107 320 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 MIR3136-201ENST00000583498 78 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 AL713866.2-201ENST00000603579 219 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.33□□□□□ -2.04
PKP4Q99569 MIR6840-201ENST00000611937 71 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.33□□□□□ -2.04
PKP4Q99569 AC240442.1-201ENST00000616055 283 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 MIR1291-201ENST00000627649 87 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 AC016717.2-201ENST00000609089 5141 ntBASIC2.33□□□□□ -2.04
PKP4Q99569 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.32□□□□□ -2.04
PKP4Q99569 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.32□□□□□ -2.04
PKP4Q99569 RNU6-379P-201ENST00000363813 104 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 Y_RNA.447-201ENST00000384184 113 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 RNU6-318P-201ENST00000384283 103 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 Y_RNA.518-201ENST00000384552 113 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 MIR10B-201ENST00000385011 110 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 RNU6-159P-201ENST00000391080 106 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 MRPL35P1-201ENST00000404272 572 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 AL133475.1-201ENST00000404414 305 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 SNORD23.1-201ENST00000408212 104 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 RNU6-1140P-201ENST00000410517 106 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 AC138623.1-201ENST00000418060 216 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 AL590135.1-201ENST00000422215 156 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 AC019205.3-201ENST00000424573 156 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.32□□□□□ -2.04
PKP4Q99569 snoU13.6-201ENST00000458785 104 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 AC090515.1-201ENST00000465295 476 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 TRBVB-201ENST00000477100 408 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 RNU6-570P-201ENST00000517051 105 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.32□□□□□ -2.04
PKP4Q99569 AC021269.2-201ENST00000532318 330 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 MIR4659A-201ENST00000580269 81 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 AC073410.2-201ENST00000603240 332 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 AL078605.1-201ENST00000603529 500 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 AC067747.1-201ENST00000608026 250 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 AC046143.2-201ENST00000609789 160 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 AC005296.1-201ENST00000616145 209 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 MIR376A1-201ENST00000616574 68 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 AC012640.5-201ENST00000623897 319 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 LINC02555-201ENST00000563933 1951 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 AC007336.1-201ENST00000576365 3828 ntBASIC2.32□□□□□ -2.04
PKP4Q99569 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.32□□□□□ -2.04
PKP4Q99569 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
PKP4Q99569 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PKP4Q99569 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PKP4Q99569 RNU6-212P-201ENST00000362642 104 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 Y_RNA.350-201ENST00000365409 98 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 RNU6-281P-201ENST00000384212 103 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 RNU6-907P-201ENST00000390924 102 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 SNORD115-46-201ENST00000390982 71 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 AL079342.1-201ENST00000401460 267 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 RPL21P38-201ENST00000418090 167 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 WARS2P1-201ENST00000429678 537 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 AC009238.1-201ENST00000442165 424 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 AL513328.1-201ENST00000446460 224 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 AC009237.6-201ENST00000446969 424 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 AC140059.1-201ENST00000489238 361 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 AC234781.5-201ENST00000508429 271 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 SNORA31.16-201ENST00000516773 139 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 RNA5SP54-201ENST00000516951 92 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 AC136932.1-201ENST00000574771 208 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 MIR5695-201ENST00000579717 85 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 MIR4300-201ENST00000581016 96 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 MIR5694-201ENST00000581190 76 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 AC103810.6-201ENST00000606708 136 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 CTSLP2-204ENST00000629029 392 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 IGHVIII-44-202ENST00000636235 289 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 SNORD98-201ENST00000636377 67 ntBASIC2.31□□□□□ -2.04
PKP4Q99569 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
PKP4Q99569 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.31□□□□□ -2.04
PKP4Q99569 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.3□□□□□ -2.04
PKP4Q99569 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PKP4Q99569 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PKP4Q99569 MIR449A-201ENST00000362113 91 ntBASIC2.3□□□□□ -2.04
PKP4Q99569 Y_RNA.14-201ENST00000362415 103 ntBASIC2.3□□□□□ -2.04
PKP4Q99569 Y_RNA.143-201ENST00000363520 106 ntBASIC2.3□□□□□ -2.04
PKP4Q99569 RNU6-280P-201ENST00000364145 104 ntBASIC2.3□□□□□ -2.04
PKP4Q99569 RNU4-56P-201ENST00000364700 142 ntBASIC2.3□□□□□ -2.04
PKP4Q99569 RNU1-51P-201ENST00000365345 176 ntBASIC2.3□□□□□ -2.04
PKP4Q99569 MIR487A-201ENST00000385009 80 ntBASIC2.3□□□□□ -2.04
PKP4Q99569 MIR561-201ENST00000385216 97 ntBASIC2.3□□□□□ -2.04
PKP4Q99569 RNU2-38P-201ENST00000410856 79 ntBASIC2.3□□□□□ -2.04
PKP4Q99569 RNA5SP270-201ENST00000411361 118 ntBASIC2.3□□□□□ -2.04
PKP4Q99569 AC096920.1-201ENST00000423991 241 ntBASIC2.3□□□□□ -2.04
PKP4Q99569 AC098869.1-201ENST00000481627 292 ntBASIC2.3□□□□□ -2.04
PKP4Q99569 RN7SL636P-201ENST00000497504 294 ntBASIC2.3□□□□□ -2.04
PKP4Q99569 RNU5F-2P-201ENST00000516066 82 ntBASIC2.3□□□□□ -2.04
PKP4Q99569 RN7SKP49-201ENST00000516675 260 ntBASIC2.3□□□□□ -2.04
PKP4Q99569 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.3□□□□□ -2.04
PKP4Q99569 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.3□□□□□ -2.04
PKP4Q99569 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.3□□□□□ -2.04
PKP4Q99569 UBL5P4-201ENST00000562584 236 ntBASIC2.3□□□□□ -2.04
PKP4Q99569 CYP4A27P-201ENST00000567218 190 ntBASIC2.3□□□□□ -2.04
PKP4Q99569 MIR4298-201ENST00000584380 73 ntBASIC2.3□□□□□ -2.04
PKP4Q99569 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 203.8 ms