Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.17□□□□□ -1.9
PTCHD1Q96NR3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.17□□□□□ -1.9
PTCHD1Q96NR3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.17□□□□□ -1.9
PTCHD1Q96NR3 MIR4744-201ENST00000581563 82 ntBASIC3.17□□□□□ -1.9
PTCHD1Q96NR3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.17□□□□□ -1.9
PTCHD1Q96NR3 AC025754.2-201ENST00000606491 432 ntBASIC3.17□□□□□ -1.9
PTCHD1Q96NR3 SNORA50A-202ENST00000629536 136 ntBASIC3.17□□□□□ -1.9
PTCHD1Q96NR3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PTCHD1Q96NR3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.17□□□□□ -1.9
PTCHD1Q96NR3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 RNU6-103P-201ENST00000363686 107 ntBASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 snoU2_19.4-201ENST00000364329 80 ntBASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 RNU6-81P-201ENST00000365608 104 ntBASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 AP002088.1-201ENST00000382740 395 ntBASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 RNU6-1274P-201ENST00000384557 107 ntBASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 RNVU1-14-201ENST00000384770 164 ntBASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 AL139095.1-201ENST00000404326 391 ntBASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 MIR1283-1-201ENST00000408494 87 ntBASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 AC126124.2-201ENST00000413542 321 ntBASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 RNU7-141P-201ENST00000459304 62 ntBASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 AC006483.1-201ENST00000487308 313 ntBASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 AC107934.2-201ENST00000518653 310 ntBASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 MIR4276-201ENST00000584832 70 ntBASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 Y_RNA.802-201ENST00000614892 130 ntBASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 AC002064.3-201ENST00000623448 346 ntBASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
PTCHD1Q96NR3 Z83843.1-201ENST00000604070 3685 ntBASIC3.15□□□□□ -1.9
PTCHD1Q96NR3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.15□□□□□ -1.91
PTCHD1Q96NR3 RNU6-944P-201ENST00000364023 107 ntBASIC3.15□□□□□ -1.91
PTCHD1Q96NR3 Y_RNA.343-201ENST00000365354 112 ntBASIC3.15□□□□□ -1.91
PTCHD1Q96NR3 CD24P4-201ENST00000382840 243 ntBASIC3.15□□□□□ -1.91
PTCHD1Q96NR3 Y_RNA.400-201ENST00000383963 111 ntBASIC3.15□□□□□ -1.91
PTCHD1Q96NR3 RNU6-578P-201ENST00000390980 103 ntBASIC3.15□□□□□ -1.91
PTCHD1Q96NR3 EBAG9P1-201ENST00000418955 543 ntBASIC3.15□□□□□ -1.91
PTCHD1Q96NR3 AC074290.1-201ENST00000448883 135 ntBASIC3.15□□□□□ -1.91
PTCHD1Q96NR3 snoU13.22-201ENST00000459428 104 ntBASIC3.15□□□□□ -1.91
PTCHD1Q96NR3 RNU7-57P-201ENST00000459540 60 ntBASIC3.15□□□□□ -1.91
PTCHD1Q96NR3 AC083906.5-201ENST00000503722 328 ntBASIC3.15□□□□□ -1.91
PTCHD1Q96NR3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.15□□□□□ -1.91
PTCHD1Q96NR3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.15□□□□□ -1.91
PTCHD1Q96NR3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.15□□□□□ -1.91
PTCHD1Q96NR3 MIR548AI-201ENST00000579940 88 ntBASIC3.15□□□□□ -1.91
PTCHD1Q96NR3 MIR4753-201ENST00000585119 83 ntBASIC3.15□□□□□ -1.91
PTCHD1Q96NR3 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.15□□□□□ -1.91
PTCHD1Q96NR3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTCHD1Q96NR3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTCHD1Q96NR3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTCHD1Q96NR3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 AP003122.5-201ENST00000527668 3766 ntBASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 AC017071.1-201ENST00000564407 2204 ntBASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 Y_RNA.24-201ENST00000362508 103 ntBASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 RNU6-1205P-201ENST00000363625 106 ntBASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 RNA5SP267-201ENST00000364893 126 ntBASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 Y_RNA.488-201ENST00000384403 102 ntBASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 Y_RNA.572-201ENST00000384757 98 ntBASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 SNORA48.8-201ENST00000391324 134 ntBASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 SNORA11.1-201ENST00000408133 129 ntBASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 AC114982.1-201ENST00000469402 321 ntBASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 MIR2276-201ENST00000516886 89 ntBASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 SCARNA11.3-201ENST00000517276 130 ntBASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
PTCHD1Q96NR3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTCHD1Q96NR3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PTCHD1Q96NR3 AL356274.2-201ENST00000624379 3752 ntBASIC3.13□□□□□ -1.91
PTCHD1Q96NR3 SNORD114-7-201ENST00000362520 77 ntBASIC3.13□□□□□ -1.91
PTCHD1Q96NR3 Y_RNA.124-201ENST00000363339 93 ntBASIC3.13□□□□□ -1.91
PTCHD1Q96NR3 RNU6-234P-201ENST00000365229 104 ntBASIC3.13□□□□□ -1.91
PTCHD1Q96NR3 RNU6-239P-201ENST00000390990 99 ntBASIC3.13□□□□□ -1.91
PTCHD1Q96NR3 CR769767.1-201ENST00000436337 346 ntBASIC3.13□□□□□ -1.91
PTCHD1Q96NR3 RPS4XP2-201ENST00000458402 793 ntBASIC3.13□□□□□ -1.91
PTCHD1Q96NR3 RN7SL601P-201ENST00000471221 293 ntBASIC3.13□□□□□ -1.91
PTCHD1Q96NR3 AC092185.1-201ENST00000491371 97 ntBASIC3.13□□□□□ -1.91
PTCHD1Q96NR3 RAC1P5-201ENST00000512182 576 ntBASIC3.13□□□□□ -1.91
PTCHD1Q96NR3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.13□□□□□ -1.91
PTCHD1Q96NR3 AC107294.3-201ENST00000609211 526 ntBASIC3.13□□□□□ -1.91
PTCHD1Q96NR3 AC092435.3-201ENST00000565538 3654 ntBASIC3.13□□□□□ -1.91
PTCHD1Q96NR3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PTCHD1Q96NR3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTCHD1Q96NR3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
PTCHD1Q96NR3 MIR208A-201ENST00000362287 71 ntBASIC3.12□□□□□ -1.91
PTCHD1Q96NR3 RNU1-72P-201ENST00000362976 153 ntBASIC3.12□□□□□ -1.91
PTCHD1Q96NR3 Y_RNA.215-201ENST00000364204 112 ntBASIC3.12□□□□□ -1.91
PTCHD1Q96NR3 RNU6-969P-201ENST00000383900 105 ntBASIC3.12□□□□□ -1.91
PTCHD1Q96NR3 SNORD14D-201ENST00000384390 87 ntBASIC3.12□□□□□ -1.91
PTCHD1Q96NR3 Y_RNA.497-201ENST00000384447 98 ntBASIC3.12□□□□□ -1.91
PTCHD1Q96NR3 MIR526A2-201ENST00000390198 65 ntBASIC3.12□□□□□ -1.91
PTCHD1Q96NR3 MIR873-201ENST00000401120 77 ntBASIC3.12□□□□□ -1.91
PTCHD1Q96NR3 AL355796.1-201ENST00000406706 323 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms