Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AL121655.1-201ENST00000605811 308 ntBASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 AC103810.6-201ENST00000606708 136 ntBASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 SNORD11B-201ENST00000607707 90 ntBASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.69□□□□□ -1.98
TRIM43Q96BQ3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.68□□□□□ -1.98
TRIM43Q96BQ3 RNU6-727P-201ENST00000363592 107 ntBASIC2.68□□□□□ -1.98
TRIM43Q96BQ3 RNU6-926P-201ENST00000384075 107 ntBASIC2.68□□□□□ -1.98
TRIM43Q96BQ3 snosnR66.1-201ENST00000391095 99 ntBASIC2.68□□□□□ -1.98
TRIM43Q96BQ3 AL033519.2-201ENST00000403958 392 ntBASIC2.68□□□□□ -1.98
TRIM43Q96BQ3 FCF1P4-201ENST00000448326 183 ntBASIC2.68□□□□□ -1.98
TRIM43Q96BQ3 AC007395.1-201ENST00000451333 677 ntBASIC2.68□□□□□ -1.98
TRIM43Q96BQ3 MTND5P22-201ENST00000458380 195 ntBASIC2.68□□□□□ -1.98
TRIM43Q96BQ3 AL355297.3-201ENST00000604082 446 ntBASIC2.68□□□□□ -1.98
TRIM43Q96BQ3 AC005034.5-201ENST00000604219 466 ntBASIC2.68□□□□□ -1.98
TRIM43Q96BQ3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.68□□□□□ -1.98
TRIM43Q96BQ3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
TRIM43Q96BQ3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.67□□□□□ -1.98
TRIM43Q96BQ3 RNU1-91P-201ENST00000364746 163 ntBASIC2.67□□□□□ -1.98
TRIM43Q96BQ3 RNU6-1145P-201ENST00000384246 107 ntBASIC2.67□□□□□ -1.98
TRIM43Q96BQ3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.67□□□□□ -1.98
TRIM43Q96BQ3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.67□□□□□ -1.98
TRIM43Q96BQ3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.67□□□□□ -1.98
TRIM43Q96BQ3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM43Q96BQ3 UQCRBP2-201ENST00000447827 297 ntBASIC2.67□□□□□ -1.98
TRIM43Q96BQ3 RNU7-14P-201ENST00000459331 62 ntBASIC2.67□□□□□ -1.98
TRIM43Q96BQ3 U8.20-201ENST00000459445 131 ntBASIC2.67□□□□□ -1.98
TRIM43Q96BQ3 AC010469.2-201ENST00000496412 480 ntBASIC2.67□□□□□ -1.98
TRIM43Q96BQ3 Y_RNA.713-201ENST00000517013 96 ntBASIC2.67□□□□□ -1.98
TRIM43Q96BQ3 RNU1-117P-201ENST00000517041 158 ntBASIC2.67□□□□□ -1.98
TRIM43Q96BQ3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM43Q96BQ3 MIR4446-201ENST00000578505 67 ntBASIC2.67□□□□□ -1.98
TRIM43Q96BQ3 MIR4659A-201ENST00000580269 81 ntBASIC2.67□□□□□ -1.98
TRIM43Q96BQ3 AC136443.5-201ENST00000603741 370 ntBASIC2.67□□□□□ -1.98
TRIM43Q96BQ3 MZT1P2-201ENST00000604387 248 ntBASIC2.67□□□□□ -1.98
TRIM43Q96BQ3 Y_RNA.772-201ENST00000606692 102 ntBASIC2.67□□□□□ -1.98
TRIM43Q96BQ3 U4atac.1-201ENST00000618345 95 ntBASIC2.67□□□□□ -1.98
TRIM43Q96BQ3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM43Q96BQ3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM43Q96BQ3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
TRIM43Q96BQ3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM43Q96BQ3 RNU6-743P-201ENST00000364151 106 ntBASIC2.66□□□□□ -1.98
TRIM43Q96BQ3 AC004866.1-201ENST00000411748 78 ntBASIC2.66□□□□□ -1.98
TRIM43Q96BQ3 AC009238.1-201ENST00000442165 424 ntBASIC2.66□□□□□ -1.98
TRIM43Q96BQ3 AC009237.6-201ENST00000446969 424 ntBASIC2.66□□□□□ -1.98
TRIM43Q96BQ3 RNU7-26P-201ENST00000458980 63 ntBASIC2.66□□□□□ -1.98
TRIM43Q96BQ3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.66□□□□□ -1.98
TRIM43Q96BQ3 RNU6-1012P-201ENST00000516606 109 ntBASIC2.66□□□□□ -1.98
TRIM43Q96BQ3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.66□□□□□ -1.98
TRIM43Q96BQ3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.66□□□□□ -1.98
TRIM43Q96BQ3 AC240442.1-201ENST00000616055 283 ntBASIC2.66□□□□□ -1.98
TRIM43Q96BQ3 FO624990.1-201ENST00000636373 85 ntBASIC2.66□□□□□ -1.98
TRIM43Q96BQ3 AC131280.1-202ENST00000624067 4211 ntBASIC2.66□□□□□ -1.98
TRIM43Q96BQ3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.66□□□□□ -1.98
TRIM43Q96BQ3 Y_RNA.4-201ENST00000362333 112 ntBASIC2.65□□□□□ -1.99
TRIM43Q96BQ3 AL357139.1-201ENST00000407792 426 ntBASIC2.65□□□□□ -1.99
TRIM43Q96BQ3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.65□□□□□ -1.99
TRIM43Q96BQ3 RPEP5-201ENST00000441137 268 ntBASIC2.65□□□□□ -1.99
TRIM43Q96BQ3 PCNPP5-201ENST00000452246 481 ntBASIC2.65□□□□□ -1.99
TRIM43Q96BQ3 AC026436.1-201ENST00000510537 270 ntBASIC2.65□□□□□ -1.99
TRIM43Q96BQ3 SNORA40.9-201ENST00000515895 93 ntBASIC2.65□□□□□ -1.99
TRIM43Q96BQ3 RNA5SP76-201ENST00000516277 87 ntBASIC2.65□□□□□ -1.99
TRIM43Q96BQ3 AC131281.1-201ENST00000522984 164 ntBASIC2.65□□□□□ -1.99
TRIM43Q96BQ3 AL021879.1-201ENST00000611756 288 ntBASIC2.65□□□□□ -1.99
TRIM43Q96BQ3 AC011476.5-201ENST00000615594 130 ntBASIC2.65□□□□□ -1.99
TRIM43Q96BQ3 AL078596.1-201ENST00000624856 447 ntBASIC2.65□□□□□ -1.99
TRIM43Q96BQ3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 Y_RNA.153-201ENST00000363615 91 ntBASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 Y_RNA.164-201ENST00000363709 102 ntBASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 SNORA38-201ENST00000363946 132 ntBASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 RNA5SP456-201ENST00000364002 114 ntBASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 RNU6-438P-201ENST00000365561 103 ntBASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 Y_RNA.439-201ENST00000384119 94 ntBASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 Y_RNA.458-201ENST00000384240 102 ntBASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 MIR300-201ENST00000401138 83 ntBASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 MRPL35P1-201ENST00000404272 572 ntBASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 AC067942.3-201ENST00000512025 362 ntBASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 AC074133.1-201ENST00000515696 183 ntBASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 RNA5SP490-201ENST00000517141 136 ntBASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 RNU6-667P-201ENST00000517186 102 ntBASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 RRN3P3-201ENST00000549207 578 ntBASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 AC010205.1-201ENST00000616668 449 ntBASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 MIR1248-201ENST00000629190 106 ntBASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 AC068205.3-201ENST00000636385 468 ntBASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 MAPK10-266ENST00000641066 6555 ntBASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
TRIM43Q96BQ3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
TRIM43Q96BQ3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
TRIM43Q96BQ3 AL356292.1-201ENST00000283110 373 ntBASIC2.63□□□□□ -1.99
TRIM43Q96BQ3 Y_RNA.210-201ENST00000364161 110 ntBASIC2.63□□□□□ -1.99
TRIM43Q96BQ3 RNU6-1305P-201ENST00000364353 104 ntBASIC2.63□□□□□ -1.99
TRIM43Q96BQ3 SNORA25B-201ENST00000365507 128 ntBASIC2.63□□□□□ -1.99
TRIM43Q96BQ3 Y_RNA.415-201ENST00000384012 112 ntBASIC2.63□□□□□ -1.99
TRIM43Q96BQ3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.63□□□□□ -1.99
TRIM43Q96BQ3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.63□□□□□ -1.99
TRIM43Q96BQ3 AC074290.1-201ENST00000448883 135 ntBASIC2.63□□□□□ -1.99
TRIM43Q96BQ3 MRPS35P2-201ENST00000508242 191 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms