Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.07□□□□□ -2.4
TTC28Q96AY4 RPL23AP30-201ENST00000432419 501 ntBASIC0.07□□□□□ -2.4
TTC28Q96AY4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.07□□□□□ -2.4
TTC28Q96AY4 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.07□□□□□ -2.4
TTC28Q96AY4 snoU13.25-201ENST00000458945 104 ntBASIC0.07□□□□□ -2.4
TTC28Q96AY4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.07□□□□□ -2.4
TTC28Q96AY4 RNU6-947P-201ENST00000516264 106 ntBASIC0.07□□□□□ -2.4
TTC28Q96AY4 RNU6-1098P-201ENST00000516772 96 ntBASIC0.07□□□□□ -2.4
TTC28Q96AY4 AC022868.1-201ENST00000517767 391 ntBASIC0.07□□□□□ -2.4
TTC28Q96AY4 SUMO2P18-201ENST00000518873 252 ntBASIC0.07□□□□□ -2.4
TTC28Q96AY4 MIR3146-201ENST00000580367 79 ntBASIC0.07□□□□□ -2.4
TTC28Q96AY4 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.07□□□□□ -2.4
TTC28Q96AY4 AL031281.1-201ENST00000604049 488 ntBASIC0.07□□□□□ -2.4
TTC28Q96AY4 AL353149.1-201ENST00000610667 244 ntBASIC0.07□□□□□ -2.4
TTC28Q96AY4 AC012409.4-201ENST00000612923 249 ntBASIC0.07□□□□□ -2.4
TTC28Q96AY4 AC009509.4-201ENST00000619202 509 ntBASIC0.07□□□□□ -2.4
TTC28Q96AY4 MIR6755-201ENST00000619993 66 ntBASIC0.07□□□□□ -2.4
TTC28Q96AY4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.06□□□□□ -2.4
TTC28Q96AY4 RNU6-609P-201ENST00000365459 107 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 RNA5SP467-201ENST00000391274 118 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
TTC28Q96AY4 FCF1P10-201ENST00000407590 479 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.06□□□□□ -2.4
TTC28Q96AY4 BTF3L4P1-201ENST00000413813 468 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.06□□□□□ -2.4
TTC28Q96AY4 AL356583.2-201ENST00000426536 280 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 AC243964.1-201ENST00000441814 261 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.06□□□□□ -2.4
TTC28Q96AY4 AL122001.1-201ENST00000457027 370 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 LINC01399-202ENST00000458450 244 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 AL139824.2-201ENST00000458731 1095 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.06□□□□□ -2.4
TTC28Q96AY4 AC107934.1-201ENST00000522215 217 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 AC109810.1-201ENST00000534066 224 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.06□□□□□ -2.4
TTC28Q96AY4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.06□□□□□ -2.4
TTC28Q96AY4 AC090049.2-201ENST00000550377 109 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.06□□□□□ -2.4
TTC28Q96AY4 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.06□□□□□ -2.4
TTC28Q96AY4 TPRKBP2-201ENST00000565969 475 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 MIR3678-201ENST00000578455 94 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 AC016597.2-201ENST00000613256 341 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 FRG1KP-201ENST00000623592 341 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 AL356596.1-201ENST00000624230 379 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 AC092104.1-201ENST00000497346 1441 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 RNU6-1123P-201ENST00000362347 106 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 Y_RNA.169-201ENST00000363745 96 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 Y_RNA.232-201ENST00000364369 96 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 RNU6-950P-201ENST00000384651 107 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 RNU6-1067P-201ENST00000384752 107 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 MIR509-1-201ENST00000385265 94 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 MIR509-2-201ENST00000390724 91 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 RPS20P2-201ENST00000402520 389 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 MIR1283-1-201ENST00000408494 87 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.06□□□□□ -2.4
TTC28Q96AY4 MRPS18CP6-201ENST00000423587 223 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 MTCO2P1-201ENST00000424648 477 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 MTCO1P20-201ENST00000425366 358 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.06□□□□□ -2.4
TTC28Q96AY4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.06□□□□□ -2.4
TTC28Q96AY4 U7.7-201ENST00000459276 60 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 AC098869.1-201ENST00000481627 292 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 AC022493.2-201ENST00000506122 481 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 RNU6-377P-201ENST00000515965 102 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.06□□□□□ -2.4
TTC28Q96AY4 ADI1P3-201ENST00000549509 470 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 AC104072.1-201ENST00000568817 668 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 AL929325.1-201ENST00000603096 117 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.06□□□□□ -2.4
TTC28Q96AY4 AC092634.7-201ENST00000621022 103 ntBASIC0.06□□□□□ -2.4
TTC28Q96AY4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
TTC28Q96AY4 RNU6-212P-201ENST00000362642 104 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 RNU6-560P-201ENST00000364007 108 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 RNU6-793P-201ENST00000384233 104 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 RNU6-1031P-201ENST00000384773 107 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 SNORD12-201ENST00000391002 90 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 RNU2-39P-201ENST00000410604 198 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 HIGD1AP15-201ENST00000416198 280 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 MTND4P3-201ENST00000417829 541 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 UBE2D3P3-201ENST00000426992 425 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 AC073910.1-201ENST00000445047 438 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.05□□□□□ -2.4
TTC28Q96AY4 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.05□□□□□ -2.4
TTC28Q96AY4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.05□□□□□ -2.4
TTC28Q96AY4 AL162424.1-201ENST00000602325 221 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 RPL17P51-201ENST00000605218 238 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 AC099785.1-201ENST00000605697 437 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 AC005520.5-201ENST00000613926 164 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 RNU1-76P-201ENST00000362903 159 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 U3.4-201ENST00000363352 213 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 SNORD32A-201ENST00000364805 84 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 SMIM11P1-201ENST00000369586 178 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 MIR653-201ENST00000385279 96 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 AC243428.1-201ENST00000421099 264 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 AL590135.1-201ENST00000422215 156 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 AC019205.3-201ENST00000424573 156 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 AC016700.2-201ENST00000446011 156 ntBASIC0.05□□□□□ -2.4
TTC28Q96AY4 AL031313.1-201ENST00000448435 256 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 290.6 ms