Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNU6-1299P-201ENST00000516316 100 ntBASIC3.69□□□□□ -1.82
NFKB1P19838 MIR4753-201ENST00000585119 83 ntBASIC3.69□□□□□ -1.82
NFKB1P19838 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.69□□□□□ -1.82
NFKB1P19838 AC008739.2-201ENST00000597006 317 ntBASIC3.69□□□□□ -1.82
NFKB1P19838 RPL30P11-203ENST00000598995 310 ntBASIC3.69□□□□□ -1.82
NFKB1P19838 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.69□□□□□ -1.82
NFKB1P19838 MIR4679-1-201ENST00000637619 75 ntBASIC3.69□□□□□ -1.82
NFKB1P19838 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.69□□□□□ -1.82
NFKB1P19838 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.68□□□□□ -1.82
NFKB1P19838 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NFKB1P19838 RNA5SP42-201ENST00000364278 115 ntBASIC3.68□□□□□ -1.82
NFKB1P19838 RNU6-975P-201ENST00000384296 105 ntBASIC3.68□□□□□ -1.82
NFKB1P19838 AC097463.2-201ENST00000421074 142 ntBASIC3.68□□□□□ -1.82
NFKB1P19838 HMGN2P31-201ENST00000432430 273 ntBASIC3.68□□□□□ -1.82
NFKB1P19838 RNU7-14P-201ENST00000459331 62 ntBASIC3.68□□□□□ -1.82
NFKB1P19838 SNORA72.7-201ENST00000516349 94 ntBASIC3.68□□□□□ -1.82
NFKB1P19838 SNORA31.21-201ENST00000517180 77 ntBASIC3.68□□□□□ -1.82
NFKB1P19838 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.68□□□□□ -1.82
NFKB1P19838 AC133485.4-201ENST00000561835 220 ntBASIC3.68□□□□□ -1.82
NFKB1P19838 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.68□□□□□ -1.82
NFKB1P19838 AC138907.4-201ENST00000570107 226 ntBASIC3.68□□□□□ -1.82
NFKB1P19838 AC131055.1-201ENST00000584626 316 ntBASIC3.68□□□□□ -1.82
NFKB1P19838 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.68□□□□□ -1.82
NFKB1P19838 AL049861.1-201ENST00000603130 150 ntBASIC3.68□□□□□ -1.82
NFKB1P19838 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.68□□□□□ -1.82
NFKB1P19838 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NFKB1P19838 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
NFKB1P19838 Z82209.1-201ENST00000422141 2135 ntBASIC3.67□□□□□ -1.82
NFKB1P19838 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NFKB1P19838 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NFKB1P19838 MIR423-201ENST00000362201 94 ntBASIC3.67□□□□□ -1.82
NFKB1P19838 RNA5SP51-201ENST00000364750 119 ntBASIC3.67□□□□□ -1.82
NFKB1P19838 MIR134-201ENST00000385258 73 ntBASIC3.67□□□□□ -1.82
NFKB1P19838 Y_RNA.630-201ENST00000411370 108 ntBASIC3.67□□□□□ -1.82
NFKB1P19838 RHEBP3-201ENST00000411920 351 ntBASIC3.67□□□□□ -1.82
NFKB1P19838 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.67□□□□□ -1.82
NFKB1P19838 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.67□□□□□ -1.82
NFKB1P19838 RPL39P40-201ENST00000445481 146 ntBASIC3.67□□□□□ -1.82
NFKB1P19838 AC010531.2-201ENST00000465012 153 ntBASIC3.67□□□□□ -1.82
NFKB1P19838 RNA5SP153-201ENST00000516498 76 ntBASIC3.67□□□□□ -1.82
NFKB1P19838 RNU6-1061P-201ENST00000516530 99 ntBASIC3.67□□□□□ -1.82
NFKB1P19838 RNU6-63P-201ENST00000516690 95 ntBASIC3.67□□□□□ -1.82
NFKB1P19838 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.67□□□□□ -1.82
NFKB1P19838 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NFKB1P19838 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.67□□□□□ -1.82
NFKB1P19838 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NFKB1P19838 RNA5SP252-201ENST00000391131 119 ntBASIC3.66□□□□□ -1.82
NFKB1P19838 Z98941.1-201ENST00000407764 100 ntBASIC3.66□□□□□ -1.82
NFKB1P19838 RNU6-57P-201ENST00000411348 103 ntBASIC3.66□□□□□ -1.82
NFKB1P19838 CYCSP19-201ENST00000411715 316 ntBASIC3.66□□□□□ -1.82
NFKB1P19838 AC002075.2-201ENST00000425207 252 ntBASIC3.66□□□□□ -1.82
NFKB1P19838 AC006989.1-201ENST00000427212 131 ntBASIC3.66□□□□□ -1.82
NFKB1P19838 AL353705.1-201ENST00000433468 480 ntBASIC3.66□□□□□ -1.82
NFKB1P19838 RPS29P31-201ENST00000446147 164 ntBASIC3.66□□□□□ -1.82
NFKB1P19838 AC008155.2-201ENST00000464337 397 ntBASIC3.66□□□□□ -1.82
NFKB1P19838 SNRPGP3-201ENST00000469405 227 ntBASIC3.66□□□□□ -1.82
NFKB1P19838 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.66□□□□□ -1.82
NFKB1P19838 AC015720.1-201ENST00000565251 277 ntBASIC3.66□□□□□ -1.82
NFKB1P19838 AC106785.1-201ENST00000565935 262 ntBASIC3.66□□□□□ -1.82
NFKB1P19838 AC097639.2-201ENST00000603159 172 ntBASIC3.66□□□□□ -1.82
NFKB1P19838 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.66□□□□□ -1.82
NFKB1P19838 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.66□□□□□ -1.82
NFKB1P19838 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
NFKB1P19838 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NFKB1P19838 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
NFKB1P19838 SNORD58C-201ENST00000365223 64 ntBASIC3.65□□□□□ -1.83
NFKB1P19838 RNU6-117P-201ENST00000365415 107 ntBASIC3.65□□□□□ -1.83
NFKB1P19838 RNU6-136P-201ENST00000384663 107 ntBASIC3.65□□□□□ -1.83
NFKB1P19838 AL603914.1-201ENST00000401964 204 ntBASIC3.65□□□□□ -1.83
NFKB1P19838 RNA5SP89-201ENST00000410300 108 ntBASIC3.65□□□□□ -1.83
NFKB1P19838 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.65□□□□□ -1.83
NFKB1P19838 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.65□□□□□ -1.83
NFKB1P19838 AC006028.1-201ENST00000438379 402 ntBASIC3.65□□□□□ -1.83
NFKB1P19838 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.65□□□□□ -1.83
NFKB1P19838 SNORA84-201ENST00000459229 133 ntBASIC3.65□□□□□ -1.83
NFKB1P19838 AC083906.5-201ENST00000503722 328 ntBASIC3.65□□□□□ -1.83
NFKB1P19838 MIR449C-201ENST00000516047 92 ntBASIC3.65□□□□□ -1.83
NFKB1P19838 RNU6-579P-201ENST00000516879 102 ntBASIC3.65□□□□□ -1.83
NFKB1P19838 AC027419.1-201ENST00000522976 328 ntBASIC3.65□□□□□ -1.83
NFKB1P19838 NDUFA5P6-201ENST00000542110 379 ntBASIC3.65□□□□□ -1.83
NFKB1P19838 MIR4738-201ENST00000579134 87 ntBASIC3.65□□□□□ -1.83
NFKB1P19838 AC006435.5-201ENST00000624486 112 ntBASIC3.65□□□□□ -1.83
NFKB1P19838 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NFKB1P19838 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
NFKB1P19838 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NFKB1P19838 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NFKB1P19838 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NFKB1P19838 AL021368.2-201ENST00000606125 5352 ntBASIC3.64□□□□□ -1.83
NFKB1P19838 SNORD9-201ENST00000362566 104 ntBASIC3.64□□□□□ -1.83
NFKB1P19838 SNORA72-201ENST00000384339 132 ntBASIC3.64□□□□□ -1.83
NFKB1P19838 SNORD116-21-201ENST00000384507 92 ntBASIC3.64□□□□□ -1.83
NFKB1P19838 MIR1294-201ENST00000408503 142 ntBASIC3.64□□□□□ -1.83
NFKB1P19838 RNA5SP511-201ENST00000410487 115 ntBASIC3.64□□□□□ -1.83
NFKB1P19838 Y_RNA.617-201ENST00000410920 90 ntBASIC3.64□□□□□ -1.83
NFKB1P19838 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.64□□□□□ -1.83
NFKB1P19838 Z98742.2-201ENST00000431564 187 ntBASIC3.64□□□□□ -1.83
NFKB1P19838 SNORD77.4-201ENST00000516158 81 ntBASIC3.64□□□□□ -1.83
NFKB1P19838 RNU6-168P-201ENST00000516189 101 ntBASIC3.64□□□□□ -1.83
NFKB1P19838 SNORA70.18-201ENST00000516696 98 ntBASIC3.64□□□□□ -1.83
NFKB1P19838 RNU2-60P-201ENST00000517290 128 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 311.9 ms