Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 Y_RNA.252-201ENST00000364556 101 ntBASIC1.68□□□□□ -2.14
HDAC3O15379 RNU6-378P-201ENST00000384324 107 ntBASIC1.68□□□□□ -2.14
HDAC3O15379 RNA5SP212-201ENST00000391223 107 ntBASIC1.68□□□□□ -2.14
HDAC3O15379 MIR1294-201ENST00000408503 142 ntBASIC1.68□□□□□ -2.14
HDAC3O15379 RNU6-1156P-201ENST00000410365 100 ntBASIC1.68□□□□□ -2.14
HDAC3O15379 MCFD2P1-201ENST00000417812 300 ntBASIC1.68□□□□□ -2.14
HDAC3O15379 AC012306.1-201ENST00000423267 114 ntBASIC1.68□□□□□ -2.14
HDAC3O15379 AL035666.1-201ENST00000446195 348 ntBASIC1.68□□□□□ -2.14
HDAC3O15379 MTND4P19-201ENST00000446659 478 ntBASIC1.68□□□□□ -2.14
HDAC3O15379 U8.22-201ENST00000459141 133 ntBASIC1.68□□□□□ -2.14
HDAC3O15379 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.68□□□□□ -2.14
HDAC3O15379 RNU6-970P-201ENST00000516312 107 ntBASIC1.68□□□□□ -2.14
HDAC3O15379 RNU6-1137P-201ENST00000517073 99 ntBASIC1.68□□□□□ -2.14
HDAC3O15379 RN7SKP295-201ENST00000517264 153 ntBASIC1.68□□□□□ -2.14
HDAC3O15379 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.68□□□□□ -2.14
HDAC3O15379 DEFB131C-201ENST00000528817 165 ntBASIC1.68□□□□□ -2.14
HDAC3O15379 AL590705.4-201ENST00000532209 134 ntBASIC1.68□□□□□ -2.14
HDAC3O15379 MIR3136-201ENST00000583498 78 ntBASIC1.68□□□□□ -2.14
HDAC3O15379 CYP2C61P-201ENST00000604072 290 ntBASIC1.68□□□□□ -2.14
HDAC3O15379 SNORD58B-201ENST00000607313 66 ntBASIC1.68□□□□□ -2.14
HDAC3O15379 AL355802.3-201ENST00000607571 545 ntBASIC1.68□□□□□ -2.14
HDAC3O15379 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.68□□□□□ -2.14
HDAC3O15379 AC087588.2-201ENST00000617667 426 ntBASIC1.68□□□□□ -2.14
HDAC3O15379 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
HDAC3O15379 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.67□□□□□ -2.14
HDAC3O15379 RNU6-222P-201ENST00000362438 107 ntBASIC1.67□□□□□ -2.14
HDAC3O15379 Y_RNA.28-201ENST00000362554 111 ntBASIC1.67□□□□□ -2.14
HDAC3O15379 RNU6-142P-201ENST00000384019 107 ntBASIC1.67□□□□□ -2.14
HDAC3O15379 SNORA8-201ENST00000384574 139 ntBASIC1.67□□□□□ -2.14
HDAC3O15379 MIR95-201ENST00000385072 81 ntBASIC1.67□□□□□ -2.14
HDAC3O15379 MIR9-3-201ENST00000385084 90 ntBASIC1.67□□□□□ -2.14
HDAC3O15379 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
HDAC3O15379 SNORA12.2-201ENST00000391040 156 ntBASIC1.67□□□□□ -2.14
HDAC3O15379 MTCYBP2-201ENST00000407745 171 ntBASIC1.67□□□□□ -2.14
HDAC3O15379 AC092423.1-201ENST00000430165 186 ntBASIC1.67□□□□□ -2.14
HDAC3O15379 AL445305.1-201ENST00000432577 575 ntBASIC1.67□□□□□ -2.14
HDAC3O15379 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.67□□□□□ -2.14
HDAC3O15379 AC003989.2-201ENST00000440224 169 ntBASIC1.67□□□□□ -2.14
HDAC3O15379 CYP2C59P-201ENST00000457790 269 ntBASIC1.67□□□□□ -2.14
HDAC3O15379 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.67□□□□□ -2.14
HDAC3O15379 RNU4-77P-201ENST00000516692 156 ntBASIC1.67□□□□□ -2.14
HDAC3O15379 RNU6-307P-201ENST00000516743 106 ntBASIC1.67□□□□□ -2.14
HDAC3O15379 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.67□□□□□ -2.14
HDAC3O15379 AC016256.1-201ENST00000547971 354 ntBASIC1.67□□□□□ -2.14
HDAC3O15379 AC004584.2-201ENST00000570407 410 ntBASIC1.67□□□□□ -2.14
HDAC3O15379 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.67□□□□□ -2.14
HDAC3O15379 AL031274.2-201ENST00000599419 203 ntBASIC1.67□□□□□ -2.14
HDAC3O15379 AC006157.1-201ENST00000611750 366 ntBASIC1.67□□□□□ -2.14
HDAC3O15379 AC138305.3-201ENST00000624988 240 ntBASIC1.67□□□□□ -2.14
HDAC3O15379 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.67□□□□□ -2.14
HDAC3O15379 SNORD114-1-201ENST00000362705 72 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 SNORD32B-201ENST00000364460 84 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 Y_RNA.314-201ENST00000365114 102 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 SNORA33.2-201ENST00000365413 134 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 RNU6-997P-201ENST00000384725 107 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 Y_RNA.577-201ENST00000384794 101 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 MIR32-201ENST00000384965 70 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 MIR208B-201ENST00000401172 77 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 Y_RNA.597-201ENST00000410463 100 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.66□□□□□ -2.14
HDAC3O15379 AC010095.1-201ENST00000443543 144 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 snoU13.30-201ENST00000458951 104 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 RNU7-169P-201ENST00000459456 61 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 AC018868.1-201ENST00000491307 315 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 MIR449C-201ENST00000516047 92 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 RNU6-264P-201ENST00000517134 104 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 RNU6-586P-201ENST00000517265 104 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 GNAI2P1-201ENST00000541815 315 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.66□□□□□ -2.14
HDAC3O15379 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.66□□□□□ -2.14
HDAC3O15379 CYP4A27P-201ENST00000567218 190 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 MIR4713-201ENST00000582691 75 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 AC092447.9-201ENST00000603395 144 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 AC016727.2-201ENST00000603988 621 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 AC016925.2-201ENST00000605108 242 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 PCGEM1.1-201ENST00000613431 131 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 AC005520.5-201ENST00000613926 164 ntBASIC1.66□□□□□ -2.14
HDAC3O15379 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.66□□□□□ -2.14
HDAC3O15379 Y_RNA.106-201ENST00000363189 100 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 SNORA63-201ENST00000363450 132 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 RNU4-9P-201ENST00000364951 139 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 RNA5SP363-201ENST00000365072 115 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 Y_RNA.428-201ENST00000384078 102 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 Y_RNA.645-201ENST00000391229 102 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 RN7SKP284-201ENST00000411002 343 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 AC004866.1-201ENST00000411748 78 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.65□□□□□ -2.15
HDAC3O15379 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.65□□□□□ -2.15
HDAC3O15379 AL121890.1-201ENST00000435457 205 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 HSPE1P21-201ENST00000438283 308 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.65□□□□□ -2.15
HDAC3O15379 AL118496.2-201ENST00000448300 230 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 OR2AQ1P-201ENST00000451972 200 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 RN7SKP210-201ENST00000459176 261 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 CKS1BP2-201ENST00000497342 240 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 YWHAEP4-201ENST00000505390 198 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 RNU6-965P-201ENST00000516721 96 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 SNORA44.1-201ENST00000517031 108 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 SNORD116.3-201ENST00000517176 78 ntBASIC1.65□□□□□ -2.15
HDAC3O15379 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms