Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 RNU6-1235P-201ENST00000384559 107 ntBASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 MIR181A2-201ENST00000384863 110 ntBASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 MIR491-201ENST00000384877 84 ntBASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 MIR513A2-201ENST00000385249 127 ntBASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 MIR1251-201ENST00000408552 70 ntBASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 RN7SKP156-201ENST00000410308 342 ntBASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 AC016925.1-201ENST00000458303 298 ntBASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 RNU6-498P-201ENST00000459468 107 ntBASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 AC131055.1-201ENST00000584626 316 ntBASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 AC097639.2-201ENST00000603159 172 ntBASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHB9Q9Y5E1 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB9Q9Y5E1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHB9Q9Y5E1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
PCDHB9Q9Y5E1 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHB9Q9Y5E1 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB9Q9Y5E1 RNU6-486P-201ENST00000363116 107 ntBASIC4.02□□□□□ -1.77
PCDHB9Q9Y5E1 SNORA22-201ENST00000383907 134 ntBASIC4.02□□□□□ -1.77
PCDHB9Q9Y5E1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHB9Q9Y5E1 AC008134.1-201ENST00000420943 193 ntBASIC4.02□□□□□ -1.77
PCDHB9Q9Y5E1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHB9Q9Y5E1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHB9Q9Y5E1 RPL39P40-201ENST00000445481 146 ntBASIC4.02□□□□□ -1.77
PCDHB9Q9Y5E1 SNORD77.4-201ENST00000516158 81 ntBASIC4.02□□□□□ -1.77
PCDHB9Q9Y5E1 AL929325.1-201ENST00000603096 117 ntBASIC4.02□□□□□ -1.77
PCDHB9Q9Y5E1 uc_338.4-201ENST00000616635 176 ntBASIC4.02□□□□□ -1.77
PCDHB9Q9Y5E1 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PCDHB9Q9Y5E1 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PCDHB9Q9Y5E1 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PCDHB9Q9Y5E1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 MTND5P32-201ENST00000560711 1802 ntBASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 RNA5SP124-201ENST00000362739 110 ntBASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 Y_RNA.114-201ENST00000363265 113 ntBASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 RNA5SP399-201ENST00000364003 117 ntBASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 RNU6-1083P-201ENST00000384022 107 ntBASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 MIR34B-201ENST00000385076 84 ntBASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 SNORA3C-201ENST00000408792 125 ntBASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 MLLT10P1-201ENST00000418346 262 ntBASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 RPL30P4-201ENST00000429309 333 ntBASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 AC110768.1-201ENST00000509222 400 ntBASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 SNORD33.1-201ENST00000516213 88 ntBASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 RNA5SP179-201ENST00000517284 121 ntBASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 AC107934.2-201ENST00000518653 310 ntBASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 AC018630.3-201ENST00000542637 96 ntBASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 CYCSP30-201ENST00000546447 172 ntBASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 MIR2681-201ENST00000581814 105 ntBASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 AC091167.4-201ENST00000605079 184 ntBASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 uc_338.32-201ENST00000615087 172 ntBASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 AC009093.8-201ENST00000641769 292 ntBASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 Z82209.1-201ENST00000422141 2135 ntBASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
PCDHB9Q9Y5E1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHB9Q9Y5E1 SNORA73.2-201ENST00000364946 201 ntBASIC4□□□□□ -1.77
PCDHB9Q9Y5E1 MIR30B-201ENST00000384850 88 ntBASIC4□□□□□ -1.77
PCDHB9Q9Y5E1 AC016909.1-201ENST00000415916 166 ntBASIC4□□□□□ -1.77
PCDHB9Q9Y5E1 AC063976.4-201ENST00000421971 163 ntBASIC4□□□□□ -1.77
PCDHB9Q9Y5E1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4□□□□□ -1.77
PCDHB9Q9Y5E1 AC245102.2-201ENST00000448956 180 ntBASIC4□□□□□ -1.77
PCDHB9Q9Y5E1 AC080013.2-201ENST00000460866 323 ntBASIC4□□□□□ -1.77
PCDHB9Q9Y5E1 SNRPGP3-201ENST00000469405 227 ntBASIC4□□□□□ -1.77
PCDHB9Q9Y5E1 AC133485.4-201ENST00000561835 220 ntBASIC4□□□□□ -1.77
PCDHB9Q9Y5E1 AC138907.4-201ENST00000570107 226 ntBASIC4□□□□□ -1.77
PCDHB9Q9Y5E1 MIR4679-2-201ENST00000578358 77 ntBASIC4□□□□□ -1.77
PCDHB9Q9Y5E1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4□□□□□ -1.77
PCDHB9Q9Y5E1 AC108081.1-201ENST00000604358 221 ntBASIC4□□□□□ -1.77
PCDHB9Q9Y5E1 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHB9Q9Y5E1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHB9Q9Y5E1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4□□□□□ -1.77
PCDHB9Q9Y5E1 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB9Q9Y5E1 RNU1-72P-201ENST00000362976 153 ntBASIC3.99□□□□□ -1.77
PCDHB9Q9Y5E1 Y_RNA.203-201ENST00000364106 102 ntBASIC3.99□□□□□ -1.77
PCDHB9Q9Y5E1 RNA5SP72-201ENST00000364442 117 ntBASIC3.99□□□□□ -1.77
PCDHB9Q9Y5E1 RNU6-418P-201ENST00000384035 107 ntBASIC3.99□□□□□ -1.77
PCDHB9Q9Y5E1 SNORA9-201ENST00000384215 133 ntBASIC3.99□□□□□ -1.77
PCDHB9Q9Y5E1 RNU6-136P-201ENST00000384663 107 ntBASIC3.99□□□□□ -1.77
PCDHB9Q9Y5E1 AL603914.1-201ENST00000401964 204 ntBASIC3.99□□□□□ -1.77
PCDHB9Q9Y5E1 RNU2-70P-201ENST00000410718 179 ntBASIC3.99□□□□□ -1.77
PCDHB9Q9Y5E1 Y_RNA.630-201ENST00000411370 108 ntBASIC3.99□□□□□ -1.77
PCDHB9Q9Y5E1 AC126124.2-201ENST00000413542 321 ntBASIC3.99□□□□□ -1.77
PCDHB9Q9Y5E1 AC009414.1-201ENST00000427200 443 ntBASIC3.99□□□□□ -1.77
PCDHB9Q9Y5E1 RPS27P22-201ENST00000478056 241 ntBASIC3.99□□□□□ -1.77
PCDHB9Q9Y5E1 SNORA74D-201ENST00000516404 141 ntBASIC3.99□□□□□ -1.77
PCDHB9Q9Y5E1 RNU6-1061P-201ENST00000516530 99 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms