Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AL138721.1-201ENST00000616756 179 ntBASIC2.3□□□□□ -2.04
KRTAP3-1Q9BYR8 AC087741.2-201ENST00000619415 172 ntBASIC2.3□□□□□ -2.04
KRTAP3-1Q9BYR8 SMCR2_2.1-201ENST00000619783 161 ntBASIC2.3□□□□□ -2.04
KRTAP3-1Q9BYR8 U6.108-201ENST00000637764 58 ntBASIC2.3□□□□□ -2.04
KRTAP3-1Q9BYR8 AL049767.1-202ENST00000637826 242 ntBASIC2.3□□□□□ -2.04
KRTAP3-1Q9BYR8 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP3-1Q9BYR8 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
KRTAP3-1Q9BYR8 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
KRTAP3-1Q9BYR8 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC2.3□□□□□ -2.04
KRTAP3-1Q9BYR8 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRTAP3-1Q9BYR8 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 MIR342-201ENST00000362212 99 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 RNA5SP191-201ENST00000362585 102 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 RNU1-23P-201ENST00000363361 144 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 U8.4-201ENST00000363626 134 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 RN7SKP15-201ENST00000364742 309 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 Y_RNA.299-201ENST00000364973 94 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 SNORA80E-201ENST00000384744 137 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 MIR95-201ENST00000385072 81 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 RNA5SP144-201ENST00000410846 116 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 AC011753.3-201ENST00000443436 406 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 AL162591.2-201ENST00000449634 317 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 RN7SL30P-201ENST00000488416 306 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 RN7SL812P-201ENST00000493791 279 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 AC008953.1-201ENST00000497334 318 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 RNA5SP360-201ENST00000516555 118 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 SNORD45.4-201ENST00000516629 73 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 RNU6ATAC24P-201ENST00000516811 135 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 AC024995.1-201ENST00000523014 93 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 CYP4A43P-201ENST00000568156 121 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 MIR3691-201ENST00000578066 90 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 MIR1269B-201ENST00000580405 75 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 YPEL5P2-201ENST00000605553 359 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 AC064859.1-201ENST00000624741 174 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 AC140479.6-201ENST00000633535 357 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 AC110079.1-202ENST00000635213 138 ntBASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
KRTAP3-1Q9BYR8 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 AC021146.4-201ENST00000309229 279 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 RN7SKP103-201ENST00000363848 320 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 RNA5SP139-201ENST00000364340 117 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 RNU6-60P-201ENST00000364792 103 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 RNA5SP479-201ENST00000364858 117 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 SNORD38C-201ENST00000384381 69 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 CHEK2P5-201ENST00000423877 246 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 GOT2P5-201ENST00000433995 546 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 AL109933.2-201ENST00000452651 260 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 RN7SL636P-201ENST00000497504 294 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 ATP5LP3-201ENST00000514223 304 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 Y_RNA.705-201ENST00000516862 110 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 RNU6-711P-201ENST00000517255 106 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 MIR5588-201ENST00000581890 63 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 AC002984.1-201ENST00000591692 448 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 AL356280.1-201ENST00000603614 379 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 CTSLP2-204ENST00000629029 392 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 MIR1255B1-201ENST00000636325 63 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 LINC01355-201ENST00000566551 5444 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 CPHL1P-201ENST00000461341 3407 ntBASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP3-1Q9BYR8 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
KRTAP3-1Q9BYR8 Z83843.1-201ENST00000604070 3685 ntBASIC2.28□□□□□ -2.05
KRTAP3-1Q9BYR8 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.28□□□□□ -2.05
KRTAP3-1Q9BYR8 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC2.28□□□□□ -2.05
KRTAP3-1Q9BYR8 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC2.28□□□□□ -2.05
KRTAP3-1Q9BYR8 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP3-1Q9BYR8 SCN1A-220ENST00000641603 12506 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 192.1 ms