Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 SNORD53-201ENST00000579969 78 ntBASIC1.87□□□□□ -2.11
PAX9P55771 AL033523.1-201ENST00000605153 153 ntBASIC1.87□□□□□ -2.11
PAX9P55771 SNORD14A-201ENST00000606526 91 ntBASIC1.87□□□□□ -2.11
PAX9P55771 MIR1302-2-201ENST00000607096 138 ntBASIC1.87□□□□□ -2.11
PAX9P55771 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.87□□□□□ -2.11
PAX9P55771 MIR1291-201ENST00000627649 87 ntBASIC1.87□□□□□ -2.11
PAX9P55771 AC243829.7-201ENST00000633081 225 ntBASIC1.87□□□□□ -2.11
PAX9P55771 AC091812.1-201ENST00000432235 1948 ntBASIC1.87□□□□□ -2.11
PAX9P55771 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.87□□□□□ -2.11
PAX9P55771 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PAX9P55771 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
PAX9P55771 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PAX9P55771 MIR340-201ENST00000362125 95 ntBASIC1.86□□□□□ -2.11
PAX9P55771 RNU1-62P-201ENST00000362599 164 ntBASIC1.86□□□□□ -2.11
PAX9P55771 SNORA3A-201ENST00000364113 130 ntBASIC1.86□□□□□ -2.11
PAX9P55771 SNORD87-201ENST00000364849 89 ntBASIC1.86□□□□□ -2.11
PAX9P55771 SNORD31B-201ENST00000364977 69 ntBASIC1.86□□□□□ -2.11
PAX9P55771 Y_RNA.415-201ENST00000384012 112 ntBASIC1.86□□□□□ -2.11
PAX9P55771 RNU6-793P-201ENST00000384233 104 ntBASIC1.86□□□□□ -2.11
PAX9P55771 RNU6-1145P-201ENST00000384246 107 ntBASIC1.86□□□□□ -2.11
PAX9P55771 Y_RNA.645-201ENST00000391229 102 ntBASIC1.86□□□□□ -2.11
PAX9P55771 U3.40-201ENST00000408706 208 ntBASIC1.86□□□□□ -2.11
PAX9P55771 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.86□□□□□ -2.11
PAX9P55771 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.86□□□□□ -2.11
PAX9P55771 AC112492.4-201ENST00000456549 352 ntBASIC1.86□□□□□ -2.11
PAX9P55771 AC079804.2-201ENST00000490376 200 ntBASIC1.86□□□□□ -2.11
PAX9P55771 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.86□□□□□ -2.11
PAX9P55771 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.86□□□□□ -2.11
PAX9P55771 RNU6-911P-201ENST00000516523 104 ntBASIC1.86□□□□□ -2.11
PAX9P55771 RRN3P3-201ENST00000549207 578 ntBASIC1.86□□□□□ -2.11
PAX9P55771 AL442163.3-201ENST00000554110 156 ntBASIC1.86□□□□□ -2.11
PAX9P55771 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.86□□□□□ -2.11
PAX9P55771 VN1R91P-201ENST00000594377 169 ntBASIC1.86□□□□□ -2.11
PAX9P55771 AC025754.2-201ENST00000606491 432 ntBASIC1.86□□□□□ -2.11
PAX9P55771 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.86□□□□□ -2.11
PAX9P55771 AC010999.1-201ENST00000611856 324 ntBASIC1.86□□□□□ -2.11
PAX9P55771 AC083806.3-201ENST00000614016 455 ntBASIC1.86□□□□□ -2.11
PAX9P55771 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.86□□□□□ -2.11
PAX9P55771 MTND4P1-201ENST00000457501 1466 ntBASIC1.86□□□□□ -2.11
PAX9P55771 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
PAX9P55771 MTND5P35-201ENST00000557537 1720 ntBASIC1.86□□□□□ -2.11
PAX9P55771 Y_RNA.179-201ENST00000363844 90 ntBASIC1.85□□□□□ -2.11
PAX9P55771 Y_RNA.332-201ENST00000365271 113 ntBASIC1.85□□□□□ -2.11
PAX9P55771 RNU6-1011P-201ENST00000384668 107 ntBASIC1.85□□□□□ -2.11
PAX9P55771 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
PAX9P55771 AL033519.2-201ENST00000403958 392 ntBASIC1.85□□□□□ -2.11
PAX9P55771 AL357139.1-201ENST00000407792 426 ntBASIC1.85□□□□□ -2.11
PAX9P55771 MIR320B2-201ENST00000408479 138 ntBASIC1.85□□□□□ -2.11
PAX9P55771 RPS15AP28-201ENST00000435088 386 ntBASIC1.85□□□□□ -2.11
PAX9P55771 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.85□□□□□ -2.11
PAX9P55771 AC016925.1-201ENST00000458303 298 ntBASIC1.85□□□□□ -2.11
PAX9P55771 HMGN2P9-201ENST00000476875 229 ntBASIC1.85□□□□□ -2.11
PAX9P55771 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.85□□□□□ -2.11
PAX9P55771 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.85□□□□□ -2.11
PAX9P55771 RNU1-117P-201ENST00000517041 158 ntBASIC1.85□□□□□ -2.11
PAX9P55771 MIR2355-201ENST00000517199 87 ntBASIC1.85□□□□□ -2.11
PAX9P55771 AP003072.1-201ENST00000531740 145 ntBASIC1.85□□□□□ -2.11
PAX9P55771 AC008873.1-201ENST00000625051 138 ntBASIC1.85□□□□□ -2.11
PAX9P55771 AP000553.5-201ENST00000641933 54 ntBASIC1.85□□□□□ -2.11
PAX9P55771 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
PAX9P55771 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
PAX9P55771 RNU1-91P-201ENST00000364746 163 ntBASIC1.84□□□□□ -2.11
PAX9P55771 Y_RNA.326-201ENST00000365176 113 ntBASIC1.84□□□□□ -2.11
PAX9P55771 SNORA51.11-201ENST00000384442 131 ntBASIC1.84□□□□□ -2.11
PAX9P55771 MIR1283-1-201ENST00000408494 87 ntBASIC1.84□□□□□ -2.11
PAX9P55771 SRIP3-201ENST00000413200 219 ntBASIC1.84□□□□□ -2.11
PAX9P55771 EDDM3CP-201ENST00000415977 425 ntBASIC1.84□□□□□ -2.11
PAX9P55771 HMGN2P38-201ENST00000423806 265 ntBASIC1.84□□□□□ -2.11
PAX9P55771 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.84□□□□□ -2.11
PAX9P55771 AC018634.1-201ENST00000437554 401 ntBASIC1.84□□□□□ -2.11
PAX9P55771 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.84□□□□□ -2.11
PAX9P55771 AC007395.1-201ENST00000451333 677 ntBASIC1.84□□□□□ -2.11
PAX9P55771 AL137159.1-201ENST00000452808 512 ntBASIC1.84□□□□□ -2.11
PAX9P55771 AP001486.1-201ENST00000463339 476 ntBASIC1.84□□□□□ -2.11
PAX9P55771 AC010469.2-201ENST00000496412 480 ntBASIC1.84□□□□□ -2.11
PAX9P55771 SNORA25.10-201ENST00000515926 124 ntBASIC1.84□□□□□ -2.11
PAX9P55771 RNU6-475P-201ENST00000516073 104 ntBASIC1.84□□□□□ -2.11
PAX9P55771 Y_RNA.683-201ENST00000516508 93 ntBASIC1.84□□□□□ -2.11
PAX9P55771 SNORA40.14-201ENST00000516543 86 ntBASIC1.84□□□□□ -2.11
PAX9P55771 RN7SKP49-201ENST00000516675 260 ntBASIC1.84□□□□□ -2.11
PAX9P55771 RNU6-988P-201ENST00000519081 107 ntBASIC1.84□□□□□ -2.11
PAX9P55771 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.84□□□□□ -2.11
PAX9P55771 SNORD11B-201ENST00000607707 90 ntBASIC1.84□□□□□ -2.11
PAX9P55771 MIR6766-201ENST00000622641 72 ntBASIC1.84□□□□□ -2.11
PAX9P55771 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.84□□□□□ -2.11
PAX9P55771 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
PAX9P55771 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
PAX9P55771 AC005592.1-201ENST00000566527 1640 ntBASIC1.84□□□□□ -2.12
PAX9P55771 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
PAX9P55771 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.83□□□□□ -2.12
PAX9P55771 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.83□□□□□ -2.12
PAX9P55771 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PAX9P55771 RNY3P4-201ENST00000384428 101 ntBASIC1.83□□□□□ -2.12
PAX9P55771 RNU6-1026P-201ENST00000384465 108 ntBASIC1.83□□□□□ -2.12
PAX9P55771 MIR628-201ENST00000385229 95 ntBASIC1.83□□□□□ -2.12
PAX9P55771 MRPL42P3-201ENST00000401492 326 ntBASIC1.83□□□□□ -2.12
PAX9P55771 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.83□□□□□ -2.12
PAX9P55771 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.83□□□□□ -2.12
PAX9P55771 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.83□□□□□ -2.12
PAX9P55771 AL109933.2-201ENST00000452651 260 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 202.5 ms