Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AL158147.1-201ENST00000443970 75 ntBASIC3.74□□□□□ -1.81
NFKB1P19838 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
NFKB1P19838 Y_RNA.692-201ENST00000516627 105 ntBASIC3.74□□□□□ -1.81
NFKB1P19838 AL160236.1-201ENST00000556317 195 ntBASIC3.74□□□□□ -1.81
NFKB1P19838 MIR5187-201ENST00000583479 76 ntBASIC3.74□□□□□ -1.81
NFKB1P19838 uc_338.14-201ENST00000613162 166 ntBASIC3.74□□□□□ -1.81
NFKB1P19838 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.74□□□□□ -1.81
NFKB1P19838 MTND5P32-201ENST00000560711 1802 ntBASIC3.74□□□□□ -1.81
NFKB1P19838 CEP170P1-201ENST00000502249 4587 ntBASIC3.74□□□□□ -1.81
NFKB1P19838 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
NFKB1P19838 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NFKB1P19838 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
NFKB1P19838 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NFKB1P19838 Y_RNA.120-201ENST00000363304 110 ntBASIC3.73□□□□□ -1.81
NFKB1P19838 RNU4-41P-201ENST00000364426 143 ntBASIC3.73□□□□□ -1.81
NFKB1P19838 Y_RNA.432-201ENST00000384087 111 ntBASIC3.73□□□□□ -1.81
NFKB1P19838 MIR300-201ENST00000401138 83 ntBASIC3.73□□□□□ -1.81
NFKB1P19838 RNU2-37P-201ENST00000410695 177 ntBASIC3.73□□□□□ -1.81
NFKB1P19838 AL159169.1-201ENST00000421119 127 ntBASIC3.73□□□□□ -1.81
NFKB1P19838 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.73□□□□□ -1.81
NFKB1P19838 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.73□□□□□ -1.81
NFKB1P19838 RNU7-57P-201ENST00000459540 60 ntBASIC3.73□□□□□ -1.81
NFKB1P19838 AC010598.1-201ENST00000510378 103 ntBASIC3.73□□□□□ -1.81
NFKB1P19838 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.73□□□□□ -1.81
NFKB1P19838 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.73□□□□□ -1.81
NFKB1P19838 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.73□□□□□ -1.81
NFKB1P19838 OTUD4P1-201ENST00000237841 3067 ntBASIC3.73□□□□□ -1.81
NFKB1P19838 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
NFKB1P19838 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
NFKB1P19838 MFSD8-236ENST00000641509 4050 ntBASIC3.73□□□□□ -1.81
NFKB1P19838 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NFKB1P19838 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
NFKB1P19838 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.72□□□□□ -1.81
NFKB1P19838 AL356292.1-201ENST00000283110 373 ntBASIC3.72□□□□□ -1.81
NFKB1P19838 U8.1-201ENST00000362843 134 ntBASIC3.72□□□□□ -1.81
NFKB1P19838 RNU6-147P-201ENST00000383983 107 ntBASIC3.72□□□□□ -1.81
NFKB1P19838 U8.11-201ENST00000384699 133 ntBASIC3.72□□□□□ -1.81
NFKB1P19838 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.72□□□□□ -1.81
NFKB1P19838 AC063976.4-201ENST00000421971 163 ntBASIC3.72□□□□□ -1.81
NFKB1P19838 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.72□□□□□ -1.81
NFKB1P19838 SNORD65B-201ENST00000459126 73 ntBASIC3.72□□□□□ -1.81
NFKB1P19838 U8.18-201ENST00000459285 133 ntBASIC3.72□□□□□ -1.81
NFKB1P19838 AC006445.1-201ENST00000491925 405 ntBASIC3.72□□□□□ -1.81
NFKB1P19838 SNORD33.1-201ENST00000516213 88 ntBASIC3.72□□□□□ -1.81
NFKB1P19838 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NFKB1P19838 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NFKB1P19838 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NFKB1P19838 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.72□□□□□ -1.81
NFKB1P19838 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
NFKB1P19838 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NFKB1P19838 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NFKB1P19838 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
NFKB1P19838 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.71□□□□□ -1.82
NFKB1P19838 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.71□□□□□ -1.82
NFKB1P19838 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NFKB1P19838 RNU6-283P-201ENST00000364788 107 ntBASIC3.71□□□□□ -1.82
NFKB1P19838 MIR29B2-201ENST00000385055 81 ntBASIC3.71□□□□□ -1.82
NFKB1P19838 RNA5SP38-201ENST00000410750 119 ntBASIC3.71□□□□□ -1.82
NFKB1P19838 SNORA57.3-201ENST00000411095 141 ntBASIC3.71□□□□□ -1.82
NFKB1P19838 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.71□□□□□ -1.82
NFKB1P19838 RNU7-170P-201ENST00000459303 61 ntBASIC3.71□□□□□ -1.82
NFKB1P19838 RNU6-221P-201ENST00000459541 99 ntBASIC3.71□□□□□ -1.82
NFKB1P19838 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.71□□□□□ -1.82
NFKB1P19838 AC108081.1-201ENST00000604358 221 ntBASIC3.71□□□□□ -1.82
NFKB1P19838 snoZ196.1-201ENST00000625269 89 ntBASIC3.71□□□□□ -1.82
NFKB1P19838 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NFKB1P19838 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
NFKB1P19838 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NFKB1P19838 AC007256.1-201ENST00000392253 2765 ntBASIC3.71□□□□□ -1.82
NFKB1P19838 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NFKB1P19838 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NFKB1P19838 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NFKB1P19838 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.7□□□□□ -1.82
NFKB1P19838 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
NFKB1P19838 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NFKB1P19838 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NFKB1P19838 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NFKB1P19838 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NFKB1P19838 Y_RNA.309-201ENST00000365046 111 ntBASIC3.7□□□□□ -1.82
NFKB1P19838 RNU6-1080P-201ENST00000383982 107 ntBASIC3.7□□□□□ -1.82
NFKB1P19838 SNORA57.1-201ENST00000391227 145 ntBASIC3.7□□□□□ -1.82
NFKB1P19838 EIF4EP4-201ENST00000424916 578 ntBASIC3.7□□□□□ -1.82
NFKB1P19838 AC090515.1-201ENST00000465295 476 ntBASIC3.7□□□□□ -1.82
NFKB1P19838 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.7□□□□□ -1.82
NFKB1P19838 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.7□□□□□ -1.82
NFKB1P19838 AL670379.3-201ENST00000605040 251 ntBASIC3.7□□□□□ -1.82
NFKB1P19838 AC138915.1-201ENST00000565427 1685 ntBASIC3.7□□□□□ -1.82
NFKB1P19838 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NFKB1P19838 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NFKB1P19838 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.7□□□□□ -1.82
NFKB1P19838 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NFKB1P19838 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.69□□□□□ -1.82
NFKB1P19838 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NFKB1P19838 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NFKB1P19838 Y_RNA.114-201ENST00000363265 113 ntBASIC3.69□□□□□ -1.82
NFKB1P19838 DYNLT3P1-201ENST00000378574 347 ntBASIC3.69□□□□□ -1.82
NFKB1P19838 SNORD14D-201ENST00000384390 87 ntBASIC3.69□□□□□ -1.82
NFKB1P19838 MLLT10P1-201ENST00000418346 262 ntBASIC3.69□□□□□ -1.82
NFKB1P19838 RNA5SP20-201ENST00000515976 84 ntBASIC3.69□□□□□ -1.82
NFKB1P19838 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms