Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 Y_RNA.597-201ENST00000410463 100 ntBASIC2.43□□□□□ -2.02
MMP3P08254 RNU6-1001P-201ENST00000411265 100 ntBASIC2.43□□□□□ -2.02
MMP3P08254 AC027124.2-201ENST00000428249 105 ntBASIC2.43□□□□□ -2.02
MMP3P08254 RNU6-1114P-201ENST00000516022 107 ntBASIC2.43□□□□□ -2.02
MMP3P08254 GNAI2P1-201ENST00000541815 315 ntBASIC2.43□□□□□ -2.02
MMP3P08254 AC125232.2-201ENST00000592457 143 ntBASIC2.43□□□□□ -2.02
MMP3P08254 VN1R91P-201ENST00000594377 169 ntBASIC2.43□□□□□ -2.02
MMP3P08254 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
MMP3P08254 SNORA18.2-201ENST00000383865 132 ntBASIC2.42□□□□□ -2.02
MMP3P08254 SNORA51.11-201ENST00000384442 131 ntBASIC2.42□□□□□ -2.02
MMP3P08254 RNU6-738P-201ENST00000384531 106 ntBASIC2.42□□□□□ -2.02
MMP3P08254 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
MMP3P08254 RNU6-159P-201ENST00000391080 106 ntBASIC2.42□□□□□ -2.02
MMP3P08254 U6atac.2-201ENST00000408644 118 ntBASIC2.42□□□□□ -2.02
MMP3P08254 RPS26P42-201ENST00000413485 326 ntBASIC2.42□□□□□ -2.02
MMP3P08254 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.42□□□□□ -2.02
MMP3P08254 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
MMP3P08254 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.42□□□□□ -2.02
MMP3P08254 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.42□□□□□ -2.02
MMP3P08254 MTATP8P1-201ENST00000467115 207 ntBASIC2.42□□□□□ -2.02
MMP3P08254 RPL23AP42-201ENST00000471152 471 ntBASIC2.42□□□□□ -2.02
MMP3P08254 HMGN1P10-201ENST00000474557 553 ntBASIC2.42□□□□□ -2.02
MMP3P08254 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.42□□□□□ -2.02
MMP3P08254 RNA5SP458-201ENST00000516188 119 ntBASIC2.42□□□□□ -2.02
MMP3P08254 RNU6-965P-201ENST00000516721 96 ntBASIC2.42□□□□□ -2.02
MMP3P08254 AC040926.1-201ENST00000530195 238 ntBASIC2.42□□□□□ -2.02
MMP3P08254 EIF4A1P12-201ENST00000551910 141 ntBASIC2.42□□□□□ -2.02
MMP3P08254 AC090517.1-201ENST00000569307 266 ntBASIC2.42□□□□□ -2.02
MMP3P08254 AC008737.2-201ENST00000599446 118 ntBASIC2.42□□□□□ -2.02
MMP3P08254 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.42□□□□□ -2.02
MMP3P08254 AC005296.1-201ENST00000616145 209 ntBASIC2.42□□□□□ -2.02
MMP3P08254 AC137590.2-201ENST00000619709 240 ntBASIC2.42□□□□□ -2.02
MMP3P08254 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
MMP3P08254 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
MMP3P08254 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.41□□□□□ -2.02
MMP3P08254 U3.9-201ENST00000363823 204 ntBASIC2.41□□□□□ -2.02
MMP3P08254 Y_RNA.424-201ENST00000384063 103 ntBASIC2.41□□□□□ -2.02
MMP3P08254 RNU6-926P-201ENST00000384075 107 ntBASIC2.41□□□□□ -2.02
MMP3P08254 RNU6-823P-201ENST00000391042 103 ntBASIC2.41□□□□□ -2.02
MMP3P08254 AC004866.1-201ENST00000411748 78 ntBASIC2.41□□□□□ -2.02
MMP3P08254 EIF1P2-201ENST00000428233 350 ntBASIC2.41□□□□□ -2.02
MMP3P08254 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.41□□□□□ -2.02
MMP3P08254 AC010469.2-201ENST00000496412 480 ntBASIC2.41□□□□□ -2.02
MMP3P08254 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.41□□□□□ -2.02
MMP3P08254 Y_RNA.676-201ENST00000516393 96 ntBASIC2.41□□□□□ -2.02
MMP3P08254 RNU6-764P-201ENST00000516396 105 ntBASIC2.41□□□□□ -2.02
MMP3P08254 RNU6-586P-201ENST00000517265 104 ntBASIC2.41□□□□□ -2.02
MMP3P08254 RNU1-104P-201ENST00000517280 175 ntBASIC2.41□□□□□ -2.02
MMP3P08254 CBX3P7-201ENST00000532876 502 ntBASIC2.41□□□□□ -2.02
MMP3P08254 AC004486.1-201ENST00000546846 233 ntBASIC2.41□□□□□ -2.02
MMP3P08254 AC093023.1-201ENST00000547375 507 ntBASIC2.41□□□□□ -2.02
MMP3P08254 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.41□□□□□ -2.02
MMP3P08254 MIR3616-201ENST00000584070 92 ntBASIC2.41□□□□□ -2.02
MMP3P08254 AL356280.1-201ENST00000603614 379 ntBASIC2.41□□□□□ -2.02
MMP3P08254 AC124312.5-201ENST00000604451 268 ntBASIC2.41□□□□□ -2.02
MMP3P08254 AL138963.2-201ENST00000605137 226 ntBASIC2.41□□□□□ -2.02
MMP3P08254 AC005520.5-201ENST00000613926 164 ntBASIC2.41□□□□□ -2.02
MMP3P08254 AC011476.5-201ENST00000615594 130 ntBASIC2.41□□□□□ -2.02
MMP3P08254 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.4□□□□□ -2.02
MMP3P08254 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
MMP3P08254 RNU1-23P-201ENST00000363361 144 ntBASIC2.4□□□□□ -2.03
MMP3P08254 RNU6-727P-201ENST00000363592 107 ntBASIC2.4□□□□□ -2.03
MMP3P08254 RNA5SP125-201ENST00000364843 120 ntBASIC2.4□□□□□ -2.03
MMP3P08254 SNORD14.1-201ENST00000365609 90 ntBASIC2.4□□□□□ -2.03
MMP3P08254 DEFA7P-201ENST00000382676 285 ntBASIC2.4□□□□□ -2.03
MMP3P08254 Y_RNA.422-201ENST00000384054 114 ntBASIC2.4□□□□□ -2.03
MMP3P08254 Y_RNA.455-201ENST00000384230 98 ntBASIC2.4□□□□□ -2.03
MMP3P08254 RNU6-318P-201ENST00000384283 103 ntBASIC2.4□□□□□ -2.03
MMP3P08254 RNA5SP213-201ENST00000391031 106 ntBASIC2.4□□□□□ -2.03
MMP3P08254 RNU1-139P-201ENST00000391307 165 ntBASIC2.4□□□□□ -2.03
MMP3P08254 RNU6-985P-201ENST00000410182 104 ntBASIC2.4□□□□□ -2.03
MMP3P08254 MTCO3P8-201ENST00000453691 755 ntBASIC2.4□□□□□ -2.03
MMP3P08254 HMGN2P23-201ENST00000456759 269 ntBASIC2.4□□□□□ -2.03
MMP3P08254 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.4□□□□□ -2.03
MMP3P08254 CKS1BP2-201ENST00000497342 240 ntBASIC2.4□□□□□ -2.03
MMP3P08254 SNORA25.14-201ENST00000516481 132 ntBASIC2.4□□□□□ -2.03
MMP3P08254 SNORA40.14-201ENST00000516543 86 ntBASIC2.4□□□□□ -2.03
MMP3P08254 AC023442.1-201ENST00000531247 422 ntBASIC2.4□□□□□ -2.03
MMP3P08254 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.4□□□□□ -2.03
MMP3P08254 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.4□□□□□ -2.03
MMP3P08254 AC113195.1-201ENST00000579952 141 ntBASIC2.4□□□□□ -2.03
MMP3P08254 PART1_1.1-201ENST00000611761 217 ntBASIC2.4□□□□□ -2.03
MMP3P08254 U6.92-201ENST00000636464 89 ntBASIC2.4□□□□□ -2.03
MMP3P08254 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
MMP3P08254 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.03
MMP3P08254 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
MMP3P08254 AL356292.1-201ENST00000283110 373 ntBASIC2.39□□□□□ -2.03
MMP3P08254 RNU6-1301P-201ENST00000362724 104 ntBASIC2.39□□□□□ -2.03
MMP3P08254 AC117470.1-201ENST00000381974 330 ntBASIC2.39□□□□□ -2.03
MMP3P08254 Y_RNA.459-201ENST00000384251 102 ntBASIC2.39□□□□□ -2.03
MMP3P08254 MIR29B2-201ENST00000385055 81 ntBASIC2.39□□□□□ -2.03
MMP3P08254 snosnR66.1-201ENST00000391095 99 ntBASIC2.39□□□□□ -2.03
MMP3P08254 RNU6-101P-201ENST00000410323 104 ntBASIC2.39□□□□□ -2.03
MMP3P08254 AL445687.1-201ENST00000439946 251 ntBASIC2.39□□□□□ -2.03
MMP3P08254 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.39□□□□□ -2.03
MMP3P08254 RNU6-475P-201ENST00000516073 104 ntBASIC2.39□□□□□ -2.03
MMP3P08254 RNU6-397P-201ENST00000516226 104 ntBASIC2.39□□□□□ -2.03
MMP3P08254 Y_RNA.720-201ENST00000517166 92 ntBASIC2.39□□□□□ -2.03
MMP3P08254 AL442163.3-201ENST00000554110 156 ntBASIC2.39□□□□□ -2.03
MMP3P08254 MIR3670-2-201ENST00000582974 65 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms